RNA–Protein interactions for RNA: ENST00000257262.12

TMEM258-201, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 468 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-201ENST00000257262 FAM215AQ9Y5M1 114 aa7.73□□□□□ -1.17
TMEM258-201ENST00000257262 NUP214P35658 2090 aaPredicted RBP7.73□□□□□ -1.17
TMEM258-201ENST00000257262 NBASA2RRP1 2371 aa7.73□□□□□ -1.17
TMEM258-201ENST00000257262 ARHGAP21Q5T5U3 1957 aa7.72□□□□□ -1.17
TMEM258-201ENST00000257262 COL12A1Q99715 3063 aa7.72□□□□□ -1.17
TMEM258-201ENST00000257262 IGLV3-32A0A0A0MS00 114 aa7.72□□□□□ -1.17
TMEM258-201ENST00000257262 PRAMEF27A3QJZ7 478 aa7.72□□□□□ -1.17
TMEM258-201ENST00000257262 FIGNL2A6NMB9 653 aa7.72□□□□□ -1.17
TMEM258-201ENST00000257262 AHRRA9YTQ3 701 aa7.72□□□□□ -1.17
TMEM258-201ENST00000257262 KDM4EB2RXH2 506 aaPredicted RBP7.72□□□□□ -1.17
TMEM258-201ENST00000257262 NPIPB9F8W1W9 429 aa7.72□□□□□ -1.17
TMEM258-201ENST00000257262 HMGN4O00479 90 aa7.72□□□□□ -1.17
TMEM258-201ENST00000257262 STX11O75558 287 aa7.72□□□□□ -1.17
TMEM258-201ENST00000257262 UGT2B17O75795 530 aa7.72□□□□□ -1.17
TMEM258-201ENST00000257262 EPPINO95925 133 aa7.72□□□□□ -1.17
TMEM258-201ENST00000257262 AGR2O95994 175 aa7.72□□□□□ -1.17
TMEM258-201ENST00000257262 AK1P00568 194 aa7.72□□□□□ -1.17
TMEM258-201ENST00000257262 VIMP08670 466 aaKnown RBP7.72□□□□□ -1.17
TMEM258-201ENST00000257262 HOXD4P09016 255 aaPredicted RBP7.72□□□□□ -1.17
TMEM258-201ENST00000257262 ZCCHC18P0CG32 403 aa7.72□□□□□ -1.17
TMEM258-201ENST00000257262 GLI4P10075 376 aa7.72□□□□□ -1.17
TMEM258-201ENST00000257262 BMP2P12643 396 aa7.72□□□□□ -1.17
TMEM258-201ENST00000257262 GABRA1P14867 456 aa7.72□□□□□ -1.17
TMEM258-201ENST00000257262 CPN1P15169 458 aa7.72□□□□□ -1.17
TMEM258-201ENST00000257262 CHMP24386 653 aa7.72□□□□□ -1.17
TMEM258-201ENST00000257262 COL8A1P27658 744 aa7.72□□□□□ -1.17
TMEM258-201ENST00000257262 GCKP35557 465 aa7.72□□□□□ -1.17
TMEM258-201ENST00000257262 MDH1P40925 334 aaKnown RBP7.72□□□□□ -1.17
TMEM258-201ENST00000257262 KHKP50053 298 aa7.72□□□□□ -1.17
TMEM258-201ENST00000257262 ATP4BP51164 291 aa7.72□□□□□ -1.17
TMEM258-201ENST00000257262 MVDP53602 400 aa7.72□□□□□ -1.17
TMEM258-201ENST00000257262 B3GALT5-AS1P59052 145 aa7.72□□□□□ -1.17
TMEM258-201ENST00000257262 IRX1P78414 480 aaPredicted RBP7.72□□□□□ -1.17
TMEM258-201ENST00000257262 FUT5Q11128 374 aa7.72□□□□□ -1.17
TMEM258-201ENST00000257262 CDSNQ15517 529 aa7.72□□□□□ -1.17
TMEM258-201ENST00000257262 CD226Q15762 336 aa7.72□□□□□ -1.17
TMEM258-201ENST00000257262 SYPL1Q16563 259 aa7.72□□□□□ -1.17
TMEM258-201ENST00000257262 GTDC1Q4AE62 458 aa7.72□□□□□ -1.17
TMEM258-201ENST00000257262 GPAT3Q53EU6 434 aa7.72□□□□□ -1.17
TMEM258-201ENST00000257262 AGKQ53H12 422 aa7.72□□□□□ -1.17
TMEM258-201ENST00000257262 COX20Q5RI15 118 aa7.72□□□□□ -1.17
TMEM258-201ENST00000257262 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.72□□□□□ -1.17
TMEM258-201ENST00000257262 C1orf185Q5T7R7 199 aa7.72□□□□□ -1.17
TMEM258-201ENST00000257262 ATAD3BQ5T9A4 648 aa7.72□□□□□ -1.17
TMEM258-201ENST00000257262 HIST2H2BCQ6DN03 193 aa7.72□□□□□ -1.17
TMEM258-201ENST00000257262 TYW3Q6IPR3 259 aaKnown RBP7.72□□□□□ -1.17
TMEM258-201ENST00000257262 CGB2Q6NT52 195 aa7.72□□□□□ -1.17
TMEM258-201ENST00000257262 XKRXQ6PP77 449 aa7.72□□□□□ -1.17
TMEM258-201ENST00000257262 CBLN3Q6UW01 205 aa7.72□□□□□ -1.17
TMEM258-201ENST00000257262 DNAJC14Q6Y2X3 702 aaPredicted RBP7.72□□□□□ -1.17
TMEM258-201ENST00000257262 B3GNT6Q6ZMB0 384 aa7.72□□□□□ -1.17
TMEM258-201ENST00000257262 MSANTD1Q6ZTZ1 278 aa7.72□□□□□ -1.17
TMEM258-201ENST00000257262 MAMDC2Q7Z304 686 aaPredicted RBP7.72□□□□□ -1.17
TMEM258-201ENST00000257262 C16orf62Q7Z3J2 963 aa7.72□□□□□ -1.17
TMEM258-201ENST00000257262 MTERF4Q7Z6M4 381 aaKnown RBP7.72□□□□□ -1.17
TMEM258-201ENST00000257262 PM20D2Q8IYS1 436 aa7.72□□□□□ -1.17
TMEM258-201ENST00000257262 ZNF527Q8NB42 609 aa7.72□□□□□ -1.17
TMEM258-201ENST00000257262 OR5M1Q8NGP8 315 aa7.72□□□□□ -1.17
TMEM258-201ENST00000257262 PHOSPHO1Q8TCT1 267 aa7.72□□□□□ -1.17
TMEM258-201ENST00000257262 RND1Q92730 232 aa7.72□□□□□ -1.17
TMEM258-201ENST00000257262 ROPN1LQ96C74 230 aa7.72□□□□□ -1.17
TMEM258-201ENST00000257262 C1GALT1C1Q96EU7 318 aa7.72□□□□□ -1.17
TMEM258-201ENST00000257262 DTNBP1Q96EV8 351 aa7.72□□□□□ -1.17
TMEM258-201ENST00000257262 SH3YL1Q96HL8 342 aaPredicted RBP7.72□□□□□ -1.17
TMEM258-201ENST00000257262 KLHDC3Q9BQ90 382 aa7.72□□□□□ -1.17
TMEM258-201ENST00000257262 TMEM120AQ9BXJ8 343 aa7.72□□□□□ -1.17
TMEM258-201ENST00000257262 PAIP1Q9H074 479 aaKnown RBP7.72□□□□□ -1.17
TMEM258-201ENST00000257262 CCDC134Q9H6E4 229 aa7.72□□□□□ -1.17
TMEM258-201ENST00000257262 TPT1P8Q9HAU6 139 aa7.72□□□□□ -1.17
TMEM258-201ENST00000257262 FGFR1OP2Q9NVK5 253 aa7.72□□□□□ -1.17
TMEM258-201ENST00000257262 COQ3Q9NZJ6 369 aa7.72□□□□□ -1.17
TMEM258-201ENST00000257262 KCNE5Q9UJ90 142 aa7.72□□□□□ -1.17
TMEM258-201ENST00000257262 RNF6Q9Y252 685 aa7.72□□□□□ -1.17
TMEM258-201ENST00000257262 ZNF337Q9Y3M9 751 aa7.72□□□□□ -1.17
TMEM258-201ENST00000257262 DTNAQ9Y4J8 743 aa7.72□□□□□ -1.17
TMEM258-201ENST00000257262 PCDHB14Q9Y5E9 798 aa7.72□□□□□ -1.17
TMEM258-201ENST00000257262 SVILO95425 2214 aa7.72□□□□□ -1.17
TMEM258-201ENST00000257262 ZNF407Q9C0G0 2248 aa7.71□□□□□ -1.17
TMEM258-201ENST00000257262 PHF3Q92576 2039 aaKnown RBP7.71□□□□□ -1.17
TMEM258-201ENST00000257262 NCOA6Q14686 2063 aaPredicted RBP7.71□□□□□ -1.17
TMEM258-201ENST00000257262 CENPVL1A0A0U1RR11 272 aa7.71□□□□□ -1.18
TMEM258-201ENST00000257262 OR2M5A3KFT3 312 aa7.71□□□□□ -1.18
TMEM258-201ENST00000257262 SHISA8B8ZZ34 492 aa7.71□□□□□ -1.18
TMEM258-201ENST00000257262 H3BNH8 94 aa7.71□□□□□ -1.18
TMEM258-201ENST00000257262 GTPBP1O00178 669 aaKnown RBP7.71□□□□□ -1.18
TMEM258-201ENST00000257262 NR5A2O00482 541 aa7.71□□□□□ -1.18
TMEM258-201ENST00000257262 OIP5O43482 229 aa7.71□□□□□ -1.18
TMEM258-201ENST00000257262 WIPF1O43516 503 aa7.71□□□□□ -1.18
TMEM258-201ENST00000257262 TOXO94900 526 aa7.71□□□□□ -1.18
TMEM258-201ENST00000257262 CLDN14O95500 239 aa7.71□□□□□ -1.18
TMEM258-201ENST00000257262 KRT75O95678 551 aa7.71□□□□□ -1.18
TMEM258-201ENST00000257262 TROVE2P10155 538 aaKnown RBP eCLIP7.71□□□□□ -1.18
TMEM258-201ENST00000257262 GP1BBP13224 206 aa7.71□□□□□ -1.18
TMEM258-201ENST00000257262 ETFAP13804 333 aa7.71□□□□□ -1.18
TMEM258-201ENST00000257262 CAPN3P20807 821 aa7.71□□□□□ -1.18
TMEM258-201ENST00000257262 AGAP20933 346 aa7.71□□□□□ -1.18
TMEM258-201ENST00000257262 MSX1P28360 303 aa7.71□□□□□ -1.18
TMEM258-201ENST00000257262 CRATP43155 626 aa7.71□□□□□ -1.18
TMEM258-201ENST00000257262 LHX2P50458 406 aa7.71□□□□□ -1.18
TMEM258-201ENST00000257262 P2RX1P51575 399 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms