RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 DDOQ99489 341 aa11.08□□□□□ -0.64
CCNA1-201ENST00000255465 OMDQ99983 421 aa11.08□□□□□ -0.64
CCNA1-201ENST00000255465 SPRTNQ9H040 489 aaPredicted RBP11.08□□□□□ -0.64
CCNA1-201ENST00000255465 LINC00597Q9H2U6 94 aa11.08□□□□□ -0.64
CCNA1-201ENST00000255465 SEMA6CQ9H3T2 930 aa11.08□□□□□ -0.64
CCNA1-201ENST00000255465 MTG2Q9H4K7 406 aa11.08□□□□□ -0.64
CCNA1-201ENST00000255465 BCO1Q9HAY6 547 aa11.08□□□□□ -0.64
CCNA1-201ENST00000255465 SPACA1Q9HBV2 294 aa11.08□□□□□ -0.64
CCNA1-201ENST00000255465 CLN6Q9NWW5 311 aa11.08□□□□□ -0.64
CCNA1-201ENST00000255465 MARCH2Q9P0N8 246 aa11.08□□□□□ -0.64
CCNA1-201ENST00000255465 KMT2EQ8IZD2 1858 aa11.08□□□□□ -0.64
CCNA1-201ENST00000255465 A0A1B0GUH1 482 aa11.08□□□□□ -0.64
CCNA1-201ENST00000255465 A8MXE2 369 aa11.08□□□□□ -0.64
CCNA1-201ENST00000255465 M0QZK8 103 aa11.08□□□□□ -0.64
CCNA1-201ENST00000255465 SEMG1P04279 462 aa11.08□□□□□ -0.64
CCNA1-201ENST00000255465 OR8G3PP0DMU2 310 aa11.08□□□□□ -0.64
CCNA1-201ENST00000255465 ARSAP15289 507 aa11.08□□□□□ -0.64
CCNA1-201ENST00000255465 ZNF44P15621 663 aa11.08□□□□□ -0.64
CCNA1-201ENST00000255465 CPEP16870 476 aa11.08□□□□□ -0.64
CCNA1-201ENST00000255465 S1PR1P21453 382 aa11.08□□□□□ -0.64
CCNA1-201ENST00000255465 SSTR4P31391 388 aa11.08□□□□□ -0.64
CCNA1-201ENST00000255465 GPR3P46089 330 aa11.08□□□□□ -0.64
CCNA1-201ENST00000255465 TNFRSF9Q07011 255 aa11.08□□□□□ -0.64
CCNA1-201ENST00000255465 RUNX3Q13761 415 aa11.08□□□□□ -0.64
CCNA1-201ENST00000255465 PDGFRLQ15198 375 aa11.08□□□□□ -0.64
CCNA1-201ENST00000255465 RBMS2Q15434 407 aaKnown RBP11.08□□□□□ -0.64
CCNA1-201ENST00000255465 EML3Q32P44 896 aa11.08□□□□□ -0.64
CCNA1-201ENST00000255465 UNC50Q53HI1 259 aa11.08□□□□□ -0.64
CCNA1-201ENST00000255465 MANEAQ5SRI9 462 aa11.08□□□□□ -0.64
CCNA1-201ENST00000255465 HEPHL1Q6MZM0 1159 aa11.08□□□□□ -0.64
CCNA1-201ENST00000255465 MSANTD1Q6ZTZ1 278 aa11.08□□□□□ -0.64
CCNA1-201ENST00000255465 CEP97Q8IW35 865 aa11.08□□□□□ -0.64
CCNA1-201ENST00000255465 PGBD5Q8N414 524 aa11.08□□□□□ -0.64
CCNA1-201ENST00000255465 BEST4Q8NFU0 473 aa11.08□□□□□ -0.64
CCNA1-201ENST00000255465 MAFIPQ8WZ33 124 aa11.08□□□□□ -0.64
CCNA1-201ENST00000255465 PIWIL1Q96J94 861 aaKnown RBP11.08□□□□□ -0.64
CCNA1-201ENST00000255465 NOL4LQ96MY1 436 aaPredicted RBP11.08□□□□□ -0.64
CCNA1-201ENST00000255465 GINS4Q9BRT9 223 aa11.08□□□□□ -0.64
CCNA1-201ENST00000255465 RIMS4Q9H426 269 aaPredicted RBP11.08□□□□□ -0.64
CCNA1-201ENST00000255465 PRDM13Q9H4Q3 707 aa11.08□□□□□ -0.64
CCNA1-201ENST00000255465 CCDC86Q9H6F5 360 aaKnown RBP11.08□□□□□ -0.64
CCNA1-201ENST00000255465 MIEF1Q9NQG6 463 aa11.08□□□□□ -0.64
CCNA1-201ENST00000255465 EXOSC3Q9NQT5 275 aaKnown RBP11.08□□□□□ -0.64
CCNA1-201ENST00000255465 NLE1Q9NVX2 485 aaPredicted RBP11.08□□□□□ -0.64
CCNA1-201ENST00000255465 PARPBPQ9NWS1 579 aa11.08□□□□□ -0.64
CCNA1-201ENST00000255465 CHST2Q9Y4C5 530 aa11.08□□□□□ -0.64
CCNA1-201ENST00000255465 ZDBF2Q9HCK1 2354 aa11.07□□□□□ -0.64
CCNA1-201ENST00000255465 C2orf92A0A1B0GVN3 265 aa11.07□□□□□ -0.64
CCNA1-201ENST00000255465 OR2M5A3KFT3 312 aa11.07□□□□□ -0.64
CCNA1-201ENST00000255465 URADA6NGE7 173 aa11.07□□□□□ -0.64
CCNA1-201ENST00000255465 OTOL1A6NHN0 477 aaPredicted RBP11.07□□□□□ -0.64
CCNA1-201ENST00000255465 PRR33A8MZF0 331 aa11.07□□□□□ -0.64
CCNA1-201ENST00000255465 MAN2B1O00754 1011 aa11.07□□□□□ -0.64
CCNA1-201ENST00000255465 FZD7O75084 574 aa11.07□□□□□ -0.64
CCNA1-201ENST00000255465 STC2O76061 302 aa11.07□□□□□ -0.64
CCNA1-201ENST00000255465 OPN1LWP04000 364 aa11.07□□□□□ -0.64
CCNA1-201ENST00000255465 OR8U8P0C7N1 319 aa11.07□□□□□ -0.64
CCNA1-201ENST00000255465 POU3F2P20265 443 aaPredicted RBP11.07□□□□□ -0.64
CCNA1-201ENST00000255465 RBMS1P29558 406 aaKnown RBP11.07□□□□□ -0.64
CCNA1-201ENST00000255465 MNDAP41218 407 aa11.07□□□□□ -0.64
CCNA1-201ENST00000255465 CRISP3P54108 245 aa11.07□□□□□ -0.64
CCNA1-201ENST00000255465 GMFBP60983 142 aa11.07□□□□□ -0.64
CCNA1-201ENST00000255465 RAP1AP62834 184 aa11.07□□□□□ -0.64
CCNA1-201ENST00000255465 POU4F2Q12837 409 aa11.07□□□□□ -0.64
CCNA1-201ENST00000255465 ARHGEF7Q14155 803 aa11.07□□□□□ -0.64
CCNA1-201ENST00000255465 TMEM95Q3KNT9 176 aa11.07□□□□□ -0.64
CCNA1-201ENST00000255465 ITPRIPL2Q3MIP1 535 aa11.07□□□□□ -0.64
CCNA1-201ENST00000255465 PLK5Q496M5 336 aa11.07□□□□□ -0.64
CCNA1-201ENST00000255465 XKR7Q5GH72 579 aa11.07□□□□□ -0.64
CCNA1-201ENST00000255465 ARHGAP40Q5TG30 622 aa11.07□□□□□ -0.64
CCNA1-201ENST00000255465 AFMIDQ63HM1 303 aa11.07□□□□□ -0.64
CCNA1-201ENST00000255465 OR6B2Q6IFH4 312 aa11.07□□□□□ -0.64
CCNA1-201ENST00000255465 MSANTD2Q6P1R3 559 aa11.07□□□□□ -0.64
CCNA1-201ENST00000255465 C11orf88Q6PI97 169 aa11.07□□□□□ -0.64
CCNA1-201ENST00000255465 SPNS3Q6ZMD2 512 aa11.07□□□□□ -0.64
CCNA1-201ENST00000255465 TPRG1Q6ZUI0 275 aa11.07□□□□□ -0.64
CCNA1-201ENST00000255465 PRICKLE2Q7Z3G6 844 aa11.07□□□□□ -0.64
CCNA1-201ENST00000255465 MRPL52Q86TS9 123 aaKnown RBP11.07□□□□□ -0.64
CCNA1-201ENST00000255465 PDZD3Q86UT5 571 aa11.07□□□□□ -0.64
CCNA1-201ENST00000255465 ACVR1CQ8NER5 493 aa11.07□□□□□ -0.64
CCNA1-201ENST00000255465 OR52N2Q8NGI0 321 aa11.07□□□□□ -0.64
CCNA1-201ENST00000255465 TRMT10AQ8TBZ6 339 aaKnown RBP11.07□□□□□ -0.64
CCNA1-201ENST00000255465 FAM122AQ96E09 287 aa11.07□□□□□ -0.64
CCNA1-201ENST00000255465 MISP3Q96FF7 219 aa11.07□□□□□ -0.64
CCNA1-201ENST00000255465 SHDQ96IW2 340 aa11.07□□□□□ -0.64
CCNA1-201ENST00000255465 TEFMQ96QE5 360 aaKnown RBP11.07□□□□□ -0.64
CCNA1-201ENST00000255465 TAAR9Q96RI9 348 aa11.07□□□□□ -0.64
CCNA1-201ENST00000255465 PKP4Q99569 1192 aa11.07□□□□□ -0.64
CCNA1-201ENST00000255465 THAP7Q9BT49 309 aaPredicted RBP11.07□□□□□ -0.64
CCNA1-201ENST00000255465 TSPAN10Q9H1Z9 355 aaPredicted RBP11.07□□□□□ -0.64
CCNA1-201ENST00000255465 MFSD1Q9H3U5 465 aa11.07□□□□□ -0.64
CCNA1-201ENST00000255465 FZD3Q9NPG1 666 aa11.07□□□□□ -0.64
CCNA1-201ENST00000255465 CTPS2Q9NRF8 586 aa11.07□□□□□ -0.64
CCNA1-201ENST00000255465 C1orf109Q9NX04 203 aa11.07□□□□□ -0.64
CCNA1-201ENST00000255465 ZNF226Q9NYT6 803 aa11.07□□□□□ -0.64
CCNA1-201ENST00000255465 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.06□□□□□ -0.64
CCNA1-201ENST00000255465 SHISA7A6NL88 538 aa11.06□□□□□ -0.64
CCNA1-201ENST00000255465 GFYI3L273 518 aa11.06□□□□□ -0.64
CCNA1-201ENST00000255465 FABP3P05413 133 aa11.06□□□□□ -0.64
CCNA1-201ENST00000255465 SPARCP09486 303 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms