RNA–Protein interactions for RNA: ENST00000250489.8

TMEM55B-201, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-201ENST00000250489 ZNHIT3Q15649 155 aaPredicted RBP23.32■■□□□ 1.32
TMEM55B-201ENST00000250489 NIPAL1Q6NVV3 410 aa23.32■■□□□ 1.32
TMEM55B-201ENST00000250489 ZNF554Q86TJ5 538 aa23.32■■□□□ 1.32
TMEM55B-201ENST00000250489 ABHD8Q96I13 439 aa23.32■■□□□ 1.32
TMEM55B-201ENST00000250489 EVA1AQ9H8M9 152 aa23.32■■□□□ 1.32
TMEM55B-201ENST00000250489 C20orf141Q9NUB4 165 aa23.32■■□□□ 1.32
TMEM55B-201ENST00000250489 BLACEA4D250 179 aa23.32■■□□□ 1.32
TMEM55B-201ENST00000250489 HRKO00198 91 aa23.32■■□□□ 1.32
TMEM55B-201ENST00000250489 CDC123O75794 336 aaPredicted RBP23.32■■□□□ 1.32
TMEM55B-201ENST00000250489 SSTR4P31391 388 aa23.32■■□□□ 1.32
TMEM55B-201ENST00000250489 RACK1P63244 317 aaKnown RBP23.32■■□□□ 1.32
TMEM55B-201ENST00000250489 PRKCDQ05655 676 aa23.32■■□□□ 1.32
TMEM55B-201ENST00000250489 FAM53BQ14153 422 aa23.32■■□□□ 1.32
TMEM55B-201ENST00000250489 UBXN2BQ14CS0 331 aa23.32■■□□□ 1.32
TMEM55B-201ENST00000250489 PDZK1Q5T2W1 519 aa23.32■■□□□ 1.32
TMEM55B-201ENST00000250489 OR2G6Q5TZ20 316 aa23.32■■□□□ 1.32
TMEM55B-201ENST00000250489 HSDL2Q6YN16 418 aa23.32■■□□□ 1.32
TMEM55B-201ENST00000250489 SHFQ7M4L6 423 aa23.32■■□□□ 1.32
TMEM55B-201ENST00000250489 C17orf82Q86X59 251 aaPredicted RBP23.32■■□□□ 1.32
TMEM55B-201ENST00000250489 ADAMTS18Q8TE60 1221 aa23.32■■□□□ 1.32
TMEM55B-201ENST00000250489 CNOT9Q92600 299 aaKnown RBP23.32■■□□□ 1.32
TMEM55B-201ENST00000250489 RBM18Q96H35 190 aaKnown RBP23.32■■□□□ 1.32
TMEM55B-201ENST00000250489 OR52D1Q9H346 318 aa23.32■■□□□ 1.32
TMEM55B-201ENST00000250489 UBQLN3Q9H347 655 aa23.32■■□□□ 1.32
TMEM55B-201ENST00000250489 PRTFDC1Q9NRG1 225 aa23.32■■□□□ 1.32
TMEM55B-201ENST00000250489 C14orf105Q9NVL8 296 aa23.32■■□□□ 1.32
TMEM55B-201ENST00000250489 SIDT1Q9NXL6 827 aaKnown RBP23.32■■□□□ 1.32
TMEM55B-201ENST00000250489 CLDN16Q9Y5I7 305 aa23.32■■□□□ 1.32
TMEM55B-201ENST00000250489 FUOMA2VDF0 154 aa23.31■■□□□ 1.32
TMEM55B-201ENST00000250489 SLC2A10O95528 541 aa23.31■■□□□ 1.32
TMEM55B-201ENST00000250489 IGKV1D-16P01601 117 aa23.31■■□□□ 1.32
TMEM55B-201ENST00000250489 IFI30P13284 250 aa23.31■■□□□ 1.32
TMEM55B-201ENST00000250489 FXYD6P3P58550 94 aa23.31■■□□□ 1.32
TMEM55B-201ENST00000250489 ERV3-1Q14264 604 aa23.31■■□□□ 1.32
TMEM55B-201ENST00000250489 COL13A1Q5TAT6 717 aaPredicted RBP23.31■■□□□ 1.32
TMEM55B-201ENST00000250489 MINDY2Q8NBR6 621 aa23.31■■□□□ 1.32
TMEM55B-201ENST00000250489 OR4N2Q8NGD1 307 aa23.31■■□□□ 1.32
TMEM55B-201ENST00000250489 OR6C4Q8NGE1 309 aa23.31■■□□□ 1.32
TMEM55B-201ENST00000250489 RNF217Q8TC41 542 aa23.31■■□□□ 1.32
TMEM55B-201ENST00000250489 VSTM2LQ96N03 204 aa23.31■■□□□ 1.32
TMEM55B-201ENST00000250489 ZNF559Q9BR84 538 aa23.31■■□□□ 1.32
TMEM55B-201ENST00000250489 ATP13A2Q9NQ11 1180 aa23.31■■□□□ 1.32
TMEM55B-201ENST00000250489 PLCL2Q9UPR0 1127 aa23.31■■□□□ 1.32
TMEM55B-201ENST00000250489 ZNF670-ZNF695F2Z2N8 137 aa23.31■■□□□ 1.32
TMEM55B-201ENST00000250489 LIMS3P0CW19 117 aa23.31■■□□□ 1.32
TMEM55B-201ENST00000250489 LIMS4P0CW20 117 aa23.31■■□□□ 1.32
TMEM55B-201ENST00000250489 FUT1P19526 365 aa23.31■■□□□ 1.32
TMEM55B-201ENST00000250489 LRIT3Q3SXY7 679 aa23.31■■□□□ 1.32
TMEM55B-201ENST00000250489 ZNF613Q6PF04 617 aa23.31■■□□□ 1.32
TMEM55B-201ENST00000250489 FANK1Q8TC84 345 aa23.31■■□□□ 1.32
TMEM55B-201ENST00000250489 ARSGQ96EG1 525 aa23.31■■□□□ 1.32
TMEM55B-201ENST00000250489 CD180Q99467 661 aa23.31■■□□□ 1.32
TMEM55B-201ENST00000250489 ISYNA1Q9NPH2 558 aa23.31■■□□□ 1.32
TMEM55B-201ENST00000250489 QPCTLQ9NXS2 382 aa23.31■■□□□ 1.32
TMEM55B-201ENST00000250489 SSR3Q9UNL2 185 aa23.31■■□□□ 1.32
TMEM55B-201ENST00000250489 SPIN1Q9Y657 262 aaPredicted RBP23.31■■□□□ 1.32
TMEM55B-201ENST00000250489 RPS19P39019 145 aaKnown RBP23.3■■□□□ 1.32
TMEM55B-201ENST00000250489 MLLT3P42568 568 aaPredicted RBP23.3■■□□□ 1.32
TMEM55B-201ENST00000250489 GFERP55789 205 aa23.3■■□□□ 1.32
TMEM55B-201ENST00000250489 BTG2P78543 158 aa23.3■■□□□ 1.32
TMEM55B-201ENST00000250489 BNC1Q01954 994 aa23.3■■□□□ 1.32
TMEM55B-201ENST00000250489 ZNF45Q02386 682 aa23.3■■□□□ 1.32
TMEM55B-201ENST00000250489 AMZ1Q400G9 498 aa23.3■■□□□ 1.32
TMEM55B-201ENST00000250489 NXNL2Q5VZ03 156 aa23.3■■□□□ 1.32
TMEM55B-201ENST00000250489 BBS1Q8NFJ9 593 aa23.3■■□□□ 1.32
TMEM55B-201ENST00000250489 CADM4Q8NFZ8 388 aa23.3■■□□□ 1.32
TMEM55B-201ENST00000250489 TM9SF4Q92544 642 aa23.3■■□□□ 1.32
TMEM55B-201ENST00000250489 HS6ST2Q96MM7 605 aa23.3■■□□□ 1.32
TMEM55B-201ENST00000250489 NUAK2Q9H093 628 aa23.3■■□□□ 1.32
TMEM55B-201ENST00000250489 TMEM27Q9HBJ8 222 aa23.3■■□□□ 1.32
TMEM55B-201ENST00000250489 DTX4Q9Y2E6 619 aa23.3■■□□□ 1.32
TMEM55B-201ENST00000250489 CSNK1G3Q9Y6M4 447 aa23.3■■□□□ 1.32
TMEM55B-201ENST00000250489 KNL1Q8NG31 2342 aa23.3■■□□□ 1.32
TMEM55B-201ENST00000250489 A0A075B6Q4 140 aa23.29■■□□□ 1.32
TMEM55B-201ENST00000250489 UPK1BO75841 260 aa23.29■■□□□ 1.32
TMEM55B-201ENST00000250489 TGM1P22735 817 aa23.29■■□□□ 1.32
TMEM55B-201ENST00000250489 HTR1FP30939 366 aa23.29■■□□□ 1.32
TMEM55B-201ENST00000250489 BCAP31P51572 246 aa23.29■■□□□ 1.32
TMEM55B-201ENST00000250489 SMAD2Q15796 467 aaKnown RBP23.29■■□□□ 1.32
TMEM55B-201ENST00000250489 GARNL3Q5VVW2 1013 aa23.29■■□□□ 1.32
TMEM55B-201ENST00000250489 GRAMD2AQ8IUY3 354 aa23.29■■□□□ 1.32
TMEM55B-201ENST00000250489 ZNF614Q8N883 585 aa23.29■■□□□ 1.32
TMEM55B-201ENST00000250489 DGAT2Q96PD7 388 aa23.29■■□□□ 1.32
TMEM55B-201ENST00000250489 TGM7Q96PF1 710 aa23.29■■□□□ 1.32
TMEM55B-201ENST00000250489 MIR1-1HGQ9H1L0 117 aa23.29■■□□□ 1.32
TMEM55B-201ENST00000250489 PCED1AQ9H1Q7 454 aa23.29■■□□□ 1.32
TMEM55B-201ENST00000250489 HINT3Q9NQE9 182 aaKnown RBP23.29■■□□□ 1.32
TMEM55B-201ENST00000250489 KLHL3Q9UH77 587 aa23.29■■□□□ 1.32
TMEM55B-201ENST00000250489 CBLCQ9ULV8 474 aa23.29■■□□□ 1.32
TMEM55B-201ENST00000250489 EXOGQ9Y2C4 368 aaKnown RBP23.29■■□□□ 1.32
TMEM55B-201ENST00000250489 SAGE2PA6NJ88 616 aa23.29■■□□□ 1.32
TMEM55B-201ENST00000250489 CLDN4O14493 209 aa23.29■■□□□ 1.32
TMEM55B-201ENST00000250489 TSPAN19P0C672 248 aa23.29■■□□□ 1.32
TMEM55B-201ENST00000250489 TBXA2RP21731 343 aa23.29■■□□□ 1.32
TMEM55B-201ENST00000250489 FNTBP49356 437 aa23.29■■□□□ 1.32
TMEM55B-201ENST00000250489 ZNF267Q14586 743 aaPredicted RBP23.29■■□□□ 1.32
TMEM55B-201ENST00000250489 CCDC85BQ15834 202 aaPredicted RBP23.29■■□□□ 1.32
TMEM55B-201ENST00000250489 NPSR1Q6W5P4 371 aa23.29■■□□□ 1.32
TMEM55B-201ENST00000250489 TMPRSS11FQ6ZWK6 438 aa23.29■■□□□ 1.32
TMEM55B-201ENST00000250489 LAPTM4BQ86VI4 370 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms