RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 CASP3P42574 277 aa18.14■□□□□ 0.49
CDC42EP1-201ENST00000249014 RFX2P48378 723 aa18.14■□□□□ 0.49
CDC42EP1-201ENST00000249014 MRPS21P82921 87 aaKnown RBP18.14■□□□□ 0.49
CDC42EP1-201ENST00000249014 TMEM44Q2T9K0 475 aa18.14■□□□□ 0.49
CDC42EP1-201ENST00000249014 RSC1A1Q92681 617 aa18.14■□□□□ 0.49
CDC42EP1-201ENST00000249014 OTULINQ96BN8 352 aa18.14■□□□□ 0.49
CDC42EP1-201ENST00000249014 SECISBP2Q96T21 854 aaKnown RBP18.14■□□□□ 0.49
CDC42EP1-201ENST00000249014 SIDT1Q9NXL6 827 aaKnown RBP18.14■□□□□ 0.49
CDC42EP1-201ENST00000249014 GXYLT2A0PJZ3 443 aa18.13■□□□□ 0.49
CDC42EP1-201ENST00000249014 UNC119BA6NIH7 251 aa18.13■□□□□ 0.49
CDC42EP1-201ENST00000249014 GALR3O60755 368 aaPredicted RBP18.13■□□□□ 0.49
CDC42EP1-201ENST00000249014 GABRG2P18507 467 aa18.13■□□□□ 0.49
CDC42EP1-201ENST00000249014 DRD1P21728 446 aa18.13■□□□□ 0.49
CDC42EP1-201ENST00000249014 MAP3K8P41279 467 aa18.13■□□□□ 0.49
CDC42EP1-201ENST00000249014 COPZ1P61923 177 aa18.13■□□□□ 0.49
CDC42EP1-201ENST00000249014 INSL4Q14641 139 aa18.13■□□□□ 0.49
CDC42EP1-201ENST00000249014 FAM131AQ6UXB0 335 aa18.13■□□□□ 0.49
CDC42EP1-201ENST00000249014 CXXC5Q7LFL8 322 aaKnown RBP18.13■□□□□ 0.49
CDC42EP1-201ENST00000249014 ZNF438Q7Z4V0 828 aa18.13■□□□□ 0.49
CDC42EP1-201ENST00000249014 ZAR1Q86SH2 424 aa18.13■□□□□ 0.49
CDC42EP1-201ENST00000249014 CA13Q8N1Q1 262 aa18.13■□□□□ 0.49
CDC42EP1-201ENST00000249014 ARIH2OSQ8N7S6 290 aa18.13■□□□□ 0.49
CDC42EP1-201ENST00000249014 SETD6Q8TBK2 473 aa18.13■□□□□ 0.49
CDC42EP1-201ENST00000249014 BRIX1Q8TDN6 353 aaKnown RBP18.13■□□□□ 0.49
CDC42EP1-201ENST00000249014 GPBAR1Q8TDU6 330 aa18.13■□□□□ 0.49
CDC42EP1-201ENST00000249014 TMEM239Q8WW34 195 aa18.13■□□□□ 0.49
CDC42EP1-201ENST00000249014 SPRYD4Q8WW59 207 aaPredicted RBP18.13■□□□□ 0.49
CDC42EP1-201ENST00000249014 TMED9Q9BVK6 235 aa18.13■□□□□ 0.49
CDC42EP1-201ENST00000249014 MSRAQ9UJ68 235 aa18.13■□□□□ 0.49
CDC42EP1-201ENST00000249014 TRDV1A0A1B0GX56 115 aa18.13■□□□□ 0.49
CDC42EP1-201ENST00000249014 ZC3H12DA2A288 527 aaKnown RBP18.13■□□□□ 0.49
CDC42EP1-201ENST00000249014 J3QRE1 110 aa18.13■□□□□ 0.49
CDC42EP1-201ENST00000249014 HMGN1P05114 100 aa18.13■□□□□ 0.49
CDC42EP1-201ENST00000249014 CTSBP07858 339 aa18.13■□□□□ 0.49
CDC42EP1-201ENST00000249014 CELP19835 753 aa18.13■□□□□ 0.49
CDC42EP1-201ENST00000249014 TBXA2RP21731 343 aa18.13■□□□□ 0.49
CDC42EP1-201ENST00000249014 UBE2IP63279 158 aaKnown RBP18.13■□□□□ 0.49
CDC42EP1-201ENST00000249014 KCNJ8Q15842 424 aa18.13■□□□□ 0.49
CDC42EP1-201ENST00000249014 VASNQ6EMK4 673 aa18.13■□□□□ 0.49
CDC42EP1-201ENST00000249014 PLBD1Q6P4A8 553 aa18.13■□□□□ 0.49
CDC42EP1-201ENST00000249014 DGAT2L6Q6ZPD8 337 aa18.13■□□□□ 0.49
CDC42EP1-201ENST00000249014 KLHL36Q8N4N3 616 aa18.13■□□□□ 0.49
CDC42EP1-201ENST00000249014 CAMKK1Q8N5S9 505 aa18.13■□□□□ 0.49
CDC42EP1-201ENST00000249014 CSNK1A1LQ8N752 337 aa18.13■□□□□ 0.49
CDC42EP1-201ENST00000249014 FANK1Q8TC84 345 aa18.13■□□□□ 0.49
CDC42EP1-201ENST00000249014 PHOX2BQ99453 314 aa18.13■□□□□ 0.49
CDC42EP1-201ENST00000249014 STACQ99469 402 aa18.13■□□□□ 0.49
CDC42EP1-201ENST00000249014 HDHD5Q9BXW7 423 aa18.13■□□□□ 0.49
CDC42EP1-201ENST00000249014 MED20Q9H944 212 aa18.13■□□□□ 0.49
CDC42EP1-201ENST00000249014 TBC1D17Q9HA65 648 aa18.13■□□□□ 0.49
CDC42EP1-201ENST00000249014 KRCC1Q9NPI7 259 aaPredicted RBP18.13■□□□□ 0.49
CDC42EP1-201ENST00000249014 POT1Q9NUX5 634 aa18.13■□□□□ 0.49
CDC42EP1-201ENST00000249014 GSTK1Q9Y2Q3 226 aa18.13■□□□□ 0.49
CDC42EP1-201ENST00000249014 ENTPD2Q9Y5L3 495 aa18.13■□□□□ 0.49
CDC42EP1-201ENST00000249014 SPACA6W5XKT8 324 aa18.13■□□□□ 0.49
CDC42EP1-201ENST00000249014 TDRD6O60522 2096 aaKnown RBP18.12■□□□□ 0.49
CDC42EP1-201ENST00000249014 A0A0J9YY10 115 aa18.12■□□□□ 0.49
CDC42EP1-201ENST00000249014 A0A1W2PQ09 198 aa18.12■□□□□ 0.49
CDC42EP1-201ENST00000249014 SGK494L7N484 410 aa18.12■□□□□ 0.49
CDC42EP1-201ENST00000249014 BHLHE40O14503 412 aa18.12■□□□□ 0.49
CDC42EP1-201ENST00000249014 IFI30P13284 250 aa18.12■□□□□ 0.49
CDC42EP1-201ENST00000249014 GABRA3P34903 492 aa18.12■□□□□ 0.49
CDC42EP1-201ENST00000249014 ATP6V1E1P36543 226 aa18.12■□□□□ 0.49
CDC42EP1-201ENST00000249014 VSX2P58304 361 aaPredicted RBP18.12■□□□□ 0.49
CDC42EP1-201ENST00000249014 SMARCD3Q6STE5 483 aa18.12■□□□□ 0.49
CDC42EP1-201ENST00000249014 NCCRP1Q6ZVX7 275 aaPredicted RBP18.12■□□□□ 0.49
CDC42EP1-201ENST00000249014 OR51G2Q8NGK0 314 aa18.12■□□□□ 0.49
CDC42EP1-201ENST00000249014 SLC37A2Q8TED4 501 aa18.12■□□□□ 0.49
CDC42EP1-201ENST00000249014 CHAC2Q8WUX2 184 aa18.12■□□□□ 0.49
CDC42EP1-201ENST00000249014 ANKRD9Q96BM1 317 aaPredicted RBP18.12■□□□□ 0.49
CDC42EP1-201ENST00000249014 CTHRC1Q96CG8 243 aa18.12■□□□□ 0.49
CDC42EP1-201ENST00000249014 DIRAS2Q96HU8 199 aa18.12■□□□□ 0.49
CDC42EP1-201ENST00000249014 HCAR1Q9BXC0 346 aa18.12■□□□□ 0.49
CDC42EP1-201ENST00000249014 CLDND1Q9NY35 253 aa18.12■□□□□ 0.49
CDC42EP1-201ENST00000249014 H2AFY2Q9P0M6 372 aaPredicted RBP18.12■□□□□ 0.49
CDC42EP1-201ENST00000249014 TNFRSF10DQ9UBN6 386 aa18.12■□□□□ 0.49
CDC42EP1-201ENST00000249014 PCDHGB2Q9Y5G2 931 aa18.12■□□□□ 0.49
CDC42EP1-201ENST00000249014 SHISA3A0PJX4 238 aa18.11■□□□□ 0.49
CDC42EP1-201ENST00000249014 TNFP01375 233 aa18.11■□□□□ 0.49
CDC42EP1-201ENST00000249014 ACSM1Q08AH1 577 aa18.11■□□□□ 0.49
CDC42EP1-201ENST00000249014 SLC35F1Q5T1Q4 408 aa18.11■□□□□ 0.49
CDC42EP1-201ENST00000249014 DDI2Q5TDH0 399 aa18.11■□□□□ 0.49
CDC42EP1-201ENST00000249014 CD180Q99467 661 aa18.11■□□□□ 0.49
CDC42EP1-201ENST00000249014 GAS2L1Q99501 681 aaPredicted RBP18.11■□□□□ 0.49
CDC42EP1-201ENST00000249014 ISG20L2Q9H9L3 353 aaKnown RBP18.11■□□□□ 0.49
CDC42EP1-201ENST00000249014 POU2F3Q9UKI9 436 aa18.11■□□□□ 0.49
CDC42EP1-201ENST00000249014 LINC00854A0A1B0GVQ3 168 aa18.11■□□□□ 0.49
CDC42EP1-201ENST00000249014 FABP12A6NFH5 140 aa18.11■□□□□ 0.49
CDC42EP1-201ENST00000249014 A8MU76 341 aa18.11■□□□□ 0.49
CDC42EP1-201ENST00000249014 DYRK3O43781 588 aa18.11■□□□□ 0.49
CDC42EP1-201ENST00000249014 AKAP8O43823 692 aaKnown RBP18.11■□□□□ 0.49
CDC42EP1-201ENST00000249014 BRINP1O60477 761 aa18.11■□□□□ 0.49
CDC42EP1-201ENST00000249014 SEMA4FO95754 770 aa18.11■□□□□ 0.49
CDC42EP1-201ENST00000249014 MADCAM1Q13477 382 aa18.11■□□□□ 0.49
CDC42EP1-201ENST00000249014 TAB1Q15750 504 aa18.11■□□□□ 0.49
CDC42EP1-201ENST00000249014 ARMC4Q5T2S8 1044 aa18.11■□□□□ 0.49
CDC42EP1-201ENST00000249014 ZNF322Q6U7Q0 402 aaPredicted RBP18.11■□□□□ 0.49
CDC42EP1-201ENST00000249014 RNF113BQ8IZP6 322 aaKnown RBP18.11■□□□□ 0.49
CDC42EP1-201ENST00000249014 ZNF655Q8N720 491 aaPredicted RBP18.11■□□□□ 0.49
CDC42EP1-201ENST00000249014 OR52N1Q8NH53 320 aa18.11■□□□□ 0.49
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