RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 KIAA0513O60268 411 aa11.56□□□□□ -0.56
VPREB3-201ENST00000248948 STX11O75558 287 aa11.56□□□□□ -0.56
VPREB3-201ENST00000248948 CPSF4O95639 269 aaKnown RBP11.56□□□□□ -0.56
VPREB3-201ENST00000248948 PEPDP12955 493 aa11.56□□□□□ -0.56
VPREB3-201ENST00000248948 POU3F2P20265 443 aaPredicted RBP11.56□□□□□ -0.56
VPREB3-201ENST00000248948 GRNP28799 593 aaKnown RBP11.56□□□□□ -0.56
VPREB3-201ENST00000248948 ADH7P40394 386 aa11.56□□□□□ -0.56
VPREB3-201ENST00000248948 ZNF41P51814 821 aaPredicted RBP11.56□□□□□ -0.56
VPREB3-201ENST00000248948 DGKQP52824 942 aa11.56□□□□□ -0.56
VPREB3-201ENST00000248948 CD226Q15762 336 aa11.56□□□□□ -0.56
VPREB3-201ENST00000248948 TMEM44Q2T9K0 475 aa11.56□□□□□ -0.56
VPREB3-201ENST00000248948 TIGD2Q4W5G0 525 aa11.56□□□□□ -0.56
VPREB3-201ENST00000248948 KLHL26Q53HC5 615 aa11.56□□□□□ -0.56
VPREB3-201ENST00000248948 ATAD3BQ5T9A4 648 aa11.56□□□□□ -0.56
VPREB3-201ENST00000248948 ZNF787Q6DD87 383 aa11.56□□□□□ -0.56
VPREB3-201ENST00000248948 C16orf62Q7Z3J2 963 aa11.56□□□□□ -0.56
VPREB3-201ENST00000248948 ADGRE4PQ86SQ3 457 aa11.56□□□□□ -0.56
VPREB3-201ENST00000248948 HEATR5AQ86XA9 2040 aa11.56□□□□□ -0.56
VPREB3-201ENST00000248948 CLEC4FQ8N1N0 589 aa11.56□□□□□ -0.56
VPREB3-201ENST00000248948 ACBD4Q8NC06 268 aa11.56□□□□□ -0.56
VPREB3-201ENST00000248948 OR10Q1Q8NGQ4 319 aa11.56□□□□□ -0.56
VPREB3-201ENST00000248948 TRIB1Q96RU8 372 aa11.56□□□□□ -0.56
VPREB3-201ENST00000248948 SDF2Q99470 211 aa11.56□□□□□ -0.56
VPREB3-201ENST00000248948 RUBCNLQ9H714 662 aa11.56□□□□□ -0.56
VPREB3-201ENST00000248948 RMND5AQ9H871 391 aa11.56□□□□□ -0.56
VPREB3-201ENST00000248948 CALHM2Q9HA72 323 aa11.56□□□□□ -0.56
VPREB3-201ENST00000248948 ZNF446Q9NWS9 450 aa11.56□□□□□ -0.56
VPREB3-201ENST00000248948 CLCF1Q9UBD9 225 aa11.56□□□□□ -0.56
VPREB3-201ENST00000248948 RPH3AQ9Y2J0 694 aaPredicted RBP11.56□□□□□ -0.56
VPREB3-201ENST00000248948 KCNE3Q9Y6H6 103 aa11.56□□□□□ -0.56
VPREB3-201ENST00000248948 ANKHD1Q8IWZ3 2542 aaKnown RBP11.56□□□□□ -0.56
VPREB3-201ENST00000248948 FAM234BA2RU67 622 aa11.55□□□□□ -0.56
VPREB3-201ENST00000248948 OR2M5A3KFT3 312 aa11.55□□□□□ -0.56
VPREB3-201ENST00000248948 RFXANKO14593 260 aa11.55□□□□□ -0.56
VPREB3-201ENST00000248948 ZCCHC18P0CG32 403 aa11.55□□□□□ -0.56
VPREB3-201ENST00000248948 COX6B1P14854 86 aa11.55□□□□□ -0.56
VPREB3-201ENST00000248948 CEACAM8P31997 349 aaPredicted RBP11.55□□□□□ -0.56
VPREB3-201ENST00000248948 CDKN2CP42773 168 aa11.55□□□□□ -0.56
VPREB3-201ENST00000248948 IDH3AP50213 366 aa11.55□□□□□ -0.56
VPREB3-201ENST00000248948 ATP4BP51164 291 aa11.55□□□□□ -0.56
VPREB3-201ENST00000248948 POLR2JP52435 117 aaKnown RBP11.55□□□□□ -0.56
VPREB3-201ENST00000248948 AQP5P55064 265 aa11.55□□□□□ -0.56
VPREB3-201ENST00000248948 EEFSECP57772 596 aaKnown RBP11.55□□□□□ -0.56
VPREB3-201ENST00000248948 HPCAP84074 193 aa11.55□□□□□ -0.56
VPREB3-201ENST00000248948 ZNF117Q03924 483 aa11.55□□□□□ -0.56
VPREB3-201ENST00000248948 TFF3Q07654 80 aa11.55□□□□□ -0.56
VPREB3-201ENST00000248948 ZNF141Q15928 474 aa11.55□□□□□ -0.56
VPREB3-201ENST00000248948 PLPPR5Q32ZL2 321 aa11.55□□□□□ -0.56
VPREB3-201ENST00000248948 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.55□□□□□ -0.56
VPREB3-201ENST00000248948 TNFAIP8L2Q6P589 184 aaPredicted RBP11.55□□□□□ -0.56
VPREB3-201ENST00000248948 CCDC71Q8IV32 467 aaPredicted RBP11.55□□□□□ -0.56
VPREB3-201ENST00000248948 GTPBP8Q8N3Z3 284 aaPredicted RBP11.55□□□□□ -0.56
VPREB3-201ENST00000248948 MEIOBQ8N635 442 aa11.55□□□□□ -0.56
VPREB3-201ENST00000248948 ARFGAP2Q8N6H7 521 aa11.55□□□□□ -0.56
VPREB3-201ENST00000248948 GATSQ8NAP1 163 aa11.55□□□□□ -0.56
VPREB3-201ENST00000248948 TOR1AIP2Q8NFQ8 470 aa11.55□□□□□ -0.56
VPREB3-201ENST00000248948 OR9I1Q8NGQ6 314 aa11.55□□□□□ -0.56
VPREB3-201ENST00000248948 B4GALNT2Q8NHY0 566 aa11.55□□□□□ -0.56
VPREB3-201ENST00000248948 TREX2Q9BQ50 279 aaPredicted RBP11.55□□□□□ -0.56
VPREB3-201ENST00000248948 TUBA1CQ9BQE3 449 aa11.55□□□□□ -0.56
VPREB3-201ENST00000248948 EBF4Q9BQW3 602 aa11.55□□□□□ -0.56
VPREB3-201ENST00000248948 ZNF629Q9UEG4 869 aaPredicted RBP11.55□□□□□ -0.56
VPREB3-201ENST00000248948 LIPT1Q9Y234 373 aa11.55□□□□□ -0.56
VPREB3-201ENST00000248948 DTNAQ9Y4J8 743 aa11.55□□□□□ -0.56
VPREB3-201ENST00000248948 AP4B1Q9Y6B7 739 aa11.55□□□□□ -0.56
VPREB3-201ENST00000248948 CLCA1A8K7I4 914 aa11.54□□□□□ -0.56
VPREB3-201ENST00000248948 DVL2O14641 736 aa11.54□□□□□ -0.56
VPREB3-201ENST00000248948 EDF1O60869 148 aaKnown RBP11.54□□□□□ -0.56
VPREB3-201ENST00000248948 TNFRSF21O75509 655 aa11.54□□□□□ -0.56
VPREB3-201ENST00000248948 TOXO94900 526 aa11.54□□□□□ -0.56
VPREB3-201ENST00000248948 KRT75O95678 551 aa11.54□□□□□ -0.56
VPREB3-201ENST00000248948 IL2RAP01589 272 aa11.54□□□□□ -0.56
VPREB3-201ENST00000248948 UBL4AP11441 157 aa11.54□□□□□ -0.56
VPREB3-201ENST00000248948 IGFBP2P18065 325 aa11.54□□□□□ -0.56
VPREB3-201ENST00000248948 TCEA1P23193 301 aaKnown RBP11.54□□□□□ -0.56
VPREB3-201ENST00000248948 ELK4P28324 431 aa11.54□□□□□ -0.56
VPREB3-201ENST00000248948 EIF1P41567 113 aaKnown RBP11.54□□□□□ -0.56
VPREB3-201ENST00000248948 P2RX1P51575 399 aa11.54□□□□□ -0.56
VPREB3-201ENST00000248948 FUT5Q11128 374 aa11.54□□□□□ -0.56
VPREB3-201ENST00000248948 AP1ARQ63HQ0 302 aa11.54□□□□□ -0.56
VPREB3-201ENST00000248948 SP5Q6BEB4 398 aaPredicted RBP11.54□□□□□ -0.56
VPREB3-201ENST00000248948 ARSKQ6UWY0 536 aa11.54□□□□□ -0.56
VPREB3-201ENST00000248948 DNAJC14Q6Y2X3 702 aaPredicted RBP11.54□□□□□ -0.56
VPREB3-201ENST00000248948 RNF130Q86XS8 419 aa11.54□□□□□ -0.56
VPREB3-201ENST00000248948 NAXEQ8NCW5 288 aa11.54□□□□□ -0.56
VPREB3-201ENST00000248948 TNIP2Q8NFZ5 429 aa11.54□□□□□ -0.56
VPREB3-201ENST00000248948 PHOSPHO1Q8TCT1 267 aa11.54□□□□□ -0.56
VPREB3-201ENST00000248948 WNT2BQ93097 391 aa11.54□□□□□ -0.56
VPREB3-201ENST00000248948 MARVELD3Q96A59 401 aa11.54□□□□□ -0.56
VPREB3-201ENST00000248948 ROPN1LQ96C74 230 aa11.54□□□□□ -0.56
VPREB3-201ENST00000248948 ITCHQ96J02 903 aa11.54□□□□□ -0.56
VPREB3-201ENST00000248948 TM9SF2Q99805 663 aa11.54□□□□□ -0.56
VPREB3-201ENST00000248948 SPOCK3Q9BQ16 436 aa11.54□□□□□ -0.56
VPREB3-201ENST00000248948 INPP5KQ9BT40 448 aa11.54□□□□□ -0.56
VPREB3-201ENST00000248948 SAP130Q9H0E3 1048 aa11.54□□□□□ -0.56
VPREB3-201ENST00000248948 ENKD1Q9H0I2 346 aa11.54□□□□□ -0.56
VPREB3-201ENST00000248948 KCNJ16Q9NPI9 418 aa11.54□□□□□ -0.56
VPREB3-201ENST00000248948 MED4Q9NPJ6 270 aa11.54□□□□□ -0.56
VPREB3-201ENST00000248948 MED17Q9NVC6 651 aa11.54□□□□□ -0.56
VPREB3-201ENST00000248948 STOML1Q9UBI4 398 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms