RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 PSKH1P11801 424 aa23.77■■□□□ 1.4
RAB40C-201ENST00000248139 FGF9P31371 208 aaPredicted RBP23.77■■□□□ 1.4
RAB40C-201ENST00000248139 KIR2DL1P43626 348 aaPredicted RBP23.77■■□□□ 1.4
RAB40C-201ENST00000248139 EXOSC7Q15024 291 aaKnown RBP23.77■■□□□ 1.4
RAB40C-201ENST00000248139 PRRT3Q5FWE3 981 aa23.77■■□□□ 1.4
RAB40C-201ENST00000248139 PPP2R2DQ66LE6 453 aa23.77■■□□□ 1.4
RAB40C-201ENST00000248139 C7orf61Q8IZ16 206 aa23.77■■□□□ 1.4
RAB40C-201ENST00000248139 MED18Q9BUE0 208 aa23.77■■□□□ 1.4
RAB40C-201ENST00000248139 RGS1Q08116 209 aa23.77■■□□□ 1.39
RAB40C-201ENST00000248139 ZNF322Q6U7Q0 402 aaPredicted RBP23.77■■□□□ 1.39
RAB40C-201ENST00000248139 ENKURQ8TC29 256 aa23.77■■□□□ 1.39
RAB40C-201ENST00000248139 NECTIN4Q96NY8 510 aa23.77■■□□□ 1.39
RAB40C-201ENST00000248139 STARD5Q9NSY2 213 aa23.77■■□□□ 1.39
RAB40C-201ENST00000248139 PAQR5Q9NXK6 330 aaPredicted RBP23.77■■□□□ 1.39
RAB40C-201ENST00000248139 NPAP1Q9NZP6 1156 aa23.77■■□□□ 1.39
RAB40C-201ENST00000248139 ZNF232Q9UNY5 417 aa23.77■■□□□ 1.39
RAB40C-201ENST00000248139 CENPXA8MT69 81 aa23.76■■□□□ 1.39
RAB40C-201ENST00000248139 PLRG1O43660 514 aaKnown RBP23.76■■□□□ 1.39
RAB40C-201ENST00000248139 HTR1FP30939 366 aa23.76■■□□□ 1.39
RAB40C-201ENST00000248139 CCDC85BQ15834 202 aaPredicted RBP23.76■■□□□ 1.39
RAB40C-201ENST00000248139 MRPL2Q5T653 305 aaKnown RBP23.76■■□□□ 1.39
RAB40C-201ENST00000248139 THSD4Q6ZMP0 1018 aa23.76■■□□□ 1.39
RAB40C-201ENST00000248139 SARGQ9BW04 601 aa23.76■■□□□ 1.39
RAB40C-201ENST00000248139 PPP1R3EQ9H7J1 279 aa23.76■■□□□ 1.39
RAB40C-201ENST00000248139 KIR3DX1Q9H7L2 352 aa23.76■■□□□ 1.39
RAB40C-201ENST00000248139 LYARQ9NX58 379 aaKnown RBP23.76■■□□□ 1.39
RAB40C-201ENST00000248139 FBXL4Q9UKA2 621 aa23.76■■□□□ 1.39
RAB40C-201ENST00000248139 CDH10Q9Y6N8 788 aa23.76■■□□□ 1.39
RAB40C-201ENST00000248139 SLC35G6P0C7Q6 338 aa23.76■■□□□ 1.39
RAB40C-201ENST00000248139 IFI30P13284 250 aa23.76■■□□□ 1.39
RAB40C-201ENST00000248139 RAB25P57735 213 aa23.76■■□□□ 1.39
RAB40C-201ENST00000248139 ENPP2Q13822 863 aa23.76■■□□□ 1.39
RAB40C-201ENST00000248139 VWA5B2Q8N398 1253 aa23.76■■□□□ 1.39
RAB40C-201ENST00000248139 AP3S1Q92572 193 aa23.76■■□□□ 1.39
RAB40C-201ENST00000248139 OR51V1Q9H2C8 321 aa23.76■■□□□ 1.39
RAB40C-201ENST00000248139 PTGFRNQ9P2B2 879 aa23.76■■□□□ 1.39
RAB40C-201ENST00000248139 NLKQ9UBE8 527 aa23.76■■□□□ 1.39
RAB40C-201ENST00000248139 IRGMA1A4Y4 181 aa23.75■■□□□ 1.39
RAB40C-201ENST00000248139 E9PI62 339 aa23.75■■□□□ 1.39
RAB40C-201ENST00000248139 CYB561A3Q8NBI2 242 aa23.75■■□□□ 1.39
RAB40C-201ENST00000248139 OR2A5Q96R48 311 aa23.75■■□□□ 1.39
RAB40C-201ENST00000248139 RNF121Q9H920 327 aa23.75■■□□□ 1.39
RAB40C-201ENST00000248139 OR6C2Q9NZP2 312 aa23.75■■□□□ 1.39
RAB40C-201ENST00000248139 KLF15Q9UIH9 416 aa23.75■■□□□ 1.39
RAB40C-201ENST00000248139 DUXAA6NLW8 204 aa23.75■■□□□ 1.39
RAB40C-201ENST00000248139 AKAP8O43823 692 aaKnown RBP23.75■■□□□ 1.39
RAB40C-201ENST00000248139 RASGRP1O95267 797 aa23.75■■□□□ 1.39
RAB40C-201ENST00000248139 GYPBP06028 91 aa23.75■■□□□ 1.39
RAB40C-201ENST00000248139 PBX2P40425 430 aa23.75■■□□□ 1.39
RAB40C-201ENST00000248139 EEF1A1P68104 462 aaKnown RBP23.75■■□□□ 1.39
RAB40C-201ENST00000248139 TRIQKQ629K1 86 aa23.75■■□□□ 1.39
RAB40C-201ENST00000248139 ZAR1Q86SH2 424 aa23.75■■□□□ 1.39
RAB40C-201ENST00000248139 RDH10Q8IZV5 341 aa23.75■■□□□ 1.39
RAB40C-201ENST00000248139 ZNF614Q8N883 585 aa23.75■■□□□ 1.39
RAB40C-201ENST00000248139 C7orf57Q8NEG2 295 aa23.75■■□□□ 1.39
RAB40C-201ENST00000248139 OR13C2Q8NGS9 318 aa23.75■■□□□ 1.39
RAB40C-201ENST00000248139 GRHL3Q8TE85 626 aa23.75■■□□□ 1.39
RAB40C-201ENST00000248139 SLC7A6Q92536 515 aa23.75■■□□□ 1.39
RAB40C-201ENST00000248139 FRMD6Q96NE9 622 aa23.75■■□□□ 1.39
RAB40C-201ENST00000248139 TIMP4Q99727 224 aa23.75■■□□□ 1.39
RAB40C-201ENST00000248139 ITGB1BP2Q9UKP3 347 aa23.75■■□□□ 1.39
RAB40C-201ENST00000248139 OR5F1O95221 314 aa23.74■■□□□ 1.39
RAB40C-201ENST00000248139 HLA-DPB1P04440 258 aa23.74■■□□□ 1.39
RAB40C-201ENST00000248139 POU2F2P09086 479 aa23.74■■□□□ 1.39
RAB40C-201ENST00000248139 CHRNB1P11230 501 aa23.74■■□□□ 1.39
RAB40C-201ENST00000248139 TEAD1P28347 426 aa23.74■■□□□ 1.39
RAB40C-201ENST00000248139 RPS7P62081 194 aaKnown RBP23.74■■□□□ 1.39
RAB40C-201ENST00000248139 OR2L13Q8N349 312 aa23.74■■□□□ 1.39
RAB40C-201ENST00000248139 C19orf18Q8NEA5 215 aa23.74■■□□□ 1.39
RAB40C-201ENST00000248139 OR10H4Q8NGA5 316 aa23.74■■□□□ 1.39
RAB40C-201ENST00000248139 OR51A7Q8NH64 312 aa23.74■■□□□ 1.39
RAB40C-201ENST00000248139 PHOSPHO2Q8TCD6 241 aa23.74■■□□□ 1.39
RAB40C-201ENST00000248139 RMI1Q9H9A7 625 aa23.74■■□□□ 1.39
RAB40C-201ENST00000248139 SIDT1Q9NXL6 827 aaKnown RBP23.74■■□□□ 1.39
RAB40C-201ENST00000248139 NLGN3Q9NZ94 848 aa23.74■■□□□ 1.39
RAB40C-201ENST00000248139 DAPP1Q9UN19 280 aa23.74■■□□□ 1.39
RAB40C-201ENST00000248139 EXOGQ9Y2C4 368 aaKnown RBP23.74■■□□□ 1.39
RAB40C-201ENST00000248139 TRAV27A0A087WT01 109 aa23.74■■□□□ 1.39
RAB40C-201ENST00000248139 HMX3A6NHT5 357 aa23.74■■□□□ 1.39
RAB40C-201ENST00000248139 FAM47E-STBD1D6RA91 191 aa23.74■■□□□ 1.39
RAB40C-201ENST00000248139 NOS3P29474 1203 aa23.74■■□□□ 1.39
RAB40C-201ENST00000248139 DDOSTP39656 456 aa23.74■■□□□ 1.39
RAB40C-201ENST00000248139 OR1Q1Q15612 314 aa23.74■■□□□ 1.39
RAB40C-201ENST00000248139 IDNKQ5T6J7 187 aa23.74■■□□□ 1.39
RAB40C-201ENST00000248139 LCN1P1Q5VSP4 162 aa23.74■■□□□ 1.39
RAB40C-201ENST00000248139 FANK1Q8TC84 345 aa23.74■■□□□ 1.39
RAB40C-201ENST00000248139 TRPV4Q9HBA0 871 aa23.74■■□□□ 1.39
RAB40C-201ENST00000248139 ISYNA1Q9NPH2 558 aa23.74■■□□□ 1.39
RAB40C-201ENST00000248139 USP36Q9P275 1121 aaKnown RBP23.74■■□□□ 1.39
RAB40C-201ENST00000248139 FGF17O60258 216 aa23.73■■□□□ 1.39
RAB40C-201ENST00000248139 IGHA1P01876 353 aa23.73■■□□□ 1.39
RAB40C-201ENST00000248139 CPMP14384 443 aa23.73■■□□□ 1.39
RAB40C-201ENST00000248139 NT5EP21589 574 aa23.73■■□□□ 1.39
RAB40C-201ENST00000248139 RPS15AP62244 130 aaKnown RBP23.73■■□□□ 1.39
RAB40C-201ENST00000248139 PPP3R1P63098 170 aa23.73■■□□□ 1.39
RAB40C-201ENST00000248139 ARHGAP11BQ3KRB8 267 aa23.73■■□□□ 1.39
RAB40C-201ENST00000248139 ITPRIPL2Q3MIP1 535 aa23.73■■□□□ 1.39
RAB40C-201ENST00000248139 C9orf50Q5SZB4 431 aa23.73■■□□□ 1.39
RAB40C-201ENST00000248139 RPTNQ6XPR3 784 aa23.73■■□□□ 1.39
RAB40C-201ENST00000248139 ZNF761Q86XN6 746 aaPredicted RBP23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms