RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 PKLRP30613 574 aa7.33□□□□□ -1.24
CXCR4-201ENST00000241393 DRD3P35462 400 aa7.33□□□□□ -1.24
CXCR4-201ENST00000241393 AHRP35869 848 aa7.33□□□□□ -1.24
CXCR4-201ENST00000241393 OPRD1P41143 372 aa7.33□□□□□ -1.24
CXCR4-201ENST00000241393 CLCNKAP51800 687 aa7.33□□□□□ -1.24
CXCR4-201ENST00000241393 XKP51811 444 aa7.33□□□□□ -1.24
CXCR4-201ENST00000241393 CRISP3P54108 245 aa7.33□□□□□ -1.24
CXCR4-201ENST00000241393 COPZ1P61923 177 aa7.33□□□□□ -1.24
CXCR4-201ENST00000241393 CYP4F2P78329 520 aa7.33□□□□□ -1.24
CXCR4-201ENST00000241393 HSPB3Q12988 150 aa7.33□□□□□ -1.24
CXCR4-201ENST00000241393 CBX3Q13185 183 aa7.33□□□□□ -1.24
CXCR4-201ENST00000241393 TPRG1LQ5T0D9 272 aa7.33□□□□□ -1.24
CXCR4-201ENST00000241393 MFSD4BQ5TF39 518 aa7.33□□□□□ -1.24
CXCR4-201ENST00000241393 PGBD2Q6P3X8 592 aa7.33□□□□□ -1.24
CXCR4-201ENST00000241393 CASP12Q6UXS9 341 aa7.33□□□□□ -1.24
CXCR4-201ENST00000241393 Q6ZSN1 163 aa7.33□□□□□ -1.24
CXCR4-201ENST00000241393 TTLL10Q6ZVT0 673 aa7.33□□□□□ -1.24
CXCR4-201ENST00000241393 YAF2Q8IY57 180 aa7.33□□□□□ -1.24
CXCR4-201ENST00000241393 OR2C3Q8N628 320 aa7.33□□□□□ -1.24
CXCR4-201ENST00000241393 DNAJC5GQ8N7S2 189 aa7.33□□□□□ -1.24
CXCR4-201ENST00000241393 SRFBP1Q8NEF9 429 aaKnown RBP7.33□□□□□ -1.24
CXCR4-201ENST00000241393 PROKR2Q8NFJ6 384 aa7.33□□□□□ -1.24
CXCR4-201ENST00000241393 OR56A1Q8NGH5 318 aa7.33□□□□□ -1.24
CXCR4-201ENST00000241393 SUN3Q8TAQ9 357 aa7.33□□□□□ -1.24
CXCR4-201ENST00000241393 PIK3R3Q92569 461 aa7.33□□□□□ -1.24
CXCR4-201ENST00000241393 EXOSC8Q96B26 276 aaKnown RBP7.33□□□□□ -1.24
CXCR4-201ENST00000241393 TMEM80Q96HE8 168 aa7.33□□□□□ -1.24
CXCR4-201ENST00000241393 RIPOR3Q96MK2 946 aa7.33□□□□□ -1.24
CXCR4-201ENST00000241393 AMDHD1Q96NU7 426 aa7.33□□□□□ -1.24
CXCR4-201ENST00000241393 CAMK1GQ96NX5 476 aa7.33□□□□□ -1.24
CXCR4-201ENST00000241393 PRAP1Q96NZ9 151 aa7.33□□□□□ -1.24
CXCR4-201ENST00000241393 POLDIP3Q9BY77 421 aaKnown RBP7.33□□□□□ -1.24
CXCR4-201ENST00000241393 POLR2J3Q9H1A7 115 aaKnown RBP7.33□□□□□ -1.24
CXCR4-201ENST00000241393 RSPH9Q9H1X1 276 aaPredicted RBP7.33□□□□□ -1.24
CXCR4-201ENST00000241393 WDR26Q9H7D7 661 aa7.33□□□□□ -1.24
CXCR4-201ENST00000241393 MVB12BQ9H7P6 319 aa7.33□□□□□ -1.24
CXCR4-201ENST00000241393 SFXN1Q9H9B4 322 aa7.33□□□□□ -1.24
CXCR4-201ENST00000241393 C3orf14Q9HBI5 128 aa7.33□□□□□ -1.24
CXCR4-201ENST00000241393 PARPBPQ9NWS1 579 aa7.33□□□□□ -1.24
CXCR4-201ENST00000241393 CRNNQ9UBG3 495 aaPredicted RBP7.33□□□□□ -1.24
CXCR4-201ENST00000241393 SEC14L4Q9UDX3 406 aa7.33□□□□□ -1.24
CXCR4-201ENST00000241393 ITGB1BP2Q9UKP3 347 aa7.33□□□□□ -1.24
CXCR4-201ENST00000241393 PAIP2BQ9ULR5 123 aaKnown RBP7.33□□□□□ -1.24
CXCR4-201ENST00000241393 SLC45A2Q9UMX9 530 aa7.33□□□□□ -1.24
CXCR4-201ENST00000241393 LSM2Q9Y333 95 aaKnown RBP7.33□□□□□ -1.24
CXCR4-201ENST00000241393 A0A0G2JPF8 293 aa7.32□□□□□ -1.24
CXCR4-201ENST00000241393 PRSS29PA6NIE9 313 aa7.32□□□□□ -1.24
CXCR4-201ENST00000241393 HNRNPCL2B2RXH8 293 aa7.32□□□□□ -1.24
CXCR4-201ENST00000241393 HNRNPCL3B7ZW38 293 aa7.32□□□□□ -1.24
CXCR4-201ENST00000241393 ASNA1O43681 348 aa7.32□□□□□ -1.24
CXCR4-201ENST00000241393 OR10H3O60404 316 aa7.32□□□□□ -1.24
CXCR4-201ENST00000241393 HNRNPCL4P0DMR1 293 aa7.32□□□□□ -1.24
CXCR4-201ENST00000241393 DBTP11182 482 aaKnown RBP7.32□□□□□ -1.24
CXCR4-201ENST00000241393 ACADMP11310 421 aa7.32□□□□□ -1.24
CXCR4-201ENST00000241393 POU2F1P14859 743 aa7.32□□□□□ -1.24
CXCR4-201ENST00000241393 GSTM3P21266 225 aa7.32□□□□□ -1.24
CXCR4-201ENST00000241393 CD72P21854 359 aa7.32□□□□□ -1.24
CXCR4-201ENST00000241393 APOBEC3AP31941 199 aaPredicted RBP7.32□□□□□ -1.24
CXCR4-201ENST00000241393 GRK5P34947 590 aa7.32□□□□□ -1.24
CXCR4-201ENST00000241393 SSR2P43308 183 aa7.32□□□□□ -1.24
CXCR4-201ENST00000241393 TAS2R38P59533 333 aa7.32□□□□□ -1.24
CXCR4-201ENST00000241393 TCF15Q12870 199 aa7.32□□□□□ -1.24
CXCR4-201ENST00000241393 TP53BP2Q13625 1128 aa7.32□□□□□ -1.24
CXCR4-201ENST00000241393 ICAM4Q14773 271 aa7.32□□□□□ -1.24
CXCR4-201ENST00000241393 SEC23BQ15437 767 aa7.32□□□□□ -1.24
CXCR4-201ENST00000241393 CST6Q15828 149 aa7.32□□□□□ -1.24
CXCR4-201ENST00000241393 NDUFAF5Q5TEU4 345 aa7.32□□□□□ -1.24
CXCR4-201ENST00000241393 FBXO46Q6PJ61 603 aaPredicted RBP7.32□□□□□ -1.24
CXCR4-201ENST00000241393 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.32□□□□□ -1.24
CXCR4-201ENST00000241393 Q6ZRM9 215 aa7.32□□□□□ -1.24
CXCR4-201ENST00000241393 GDF7Q7Z4P5 450 aa7.32□□□□□ -1.24
CXCR4-201ENST00000241393 C2orf73Q8N5S3 287 aaPredicted RBP7.32□□□□□ -1.24
CXCR4-201ENST00000241393 LINC01555Q8NAE3 123 aa7.32□□□□□ -1.24
CXCR4-201ENST00000241393 OR2A1Q8NGT9 310 aa7.32□□□□□ -1.24
CXCR4-201ENST00000241393 WDR36Q8NI36 951 aaKnown RBP7.32□□□□□ -1.24
CXCR4-201ENST00000241393 RAB8BQ92930 207 aa7.32□□□□□ -1.24
CXCR4-201ENST00000241393 PRRC1Q96M27 445 aa7.32□□□□□ -1.24
CXCR4-201ENST00000241393 C12orf66Q96MD2 445 aa7.32□□□□□ -1.24
CXCR4-201ENST00000241393 DPH7Q9BTV6 452 aa7.32□□□□□ -1.24
CXCR4-201ENST00000241393 CCDC32Q9BV29 185 aa7.32□□□□□ -1.24
CXCR4-201ENST00000241393 MND1Q9BWT6 205 aa7.32□□□□□ -1.24
CXCR4-201ENST00000241393 PINK1Q9BXM7 581 aa7.32□□□□□ -1.24
CXCR4-201ENST00000241393 OR51E2Q9H255 320 aa7.32□□□□□ -1.24
CXCR4-201ENST00000241393 MTIF3Q9H2K0 278 aaKnown RBP7.32□□□□□ -1.24
CXCR4-201ENST00000241393 OR51I1Q9H343 314 aa7.32□□□□□ -1.24
CXCR4-201ENST00000241393 GLIPR2Q9H4G4 154 aa7.32□□□□□ -1.24
CXCR4-201ENST00000241393 SERHL2Q9H4I8 314 aa7.32□□□□□ -1.24
CXCR4-201ENST00000241393 ANKRD19PQ9H560 264 aa7.32□□□□□ -1.24
CXCR4-201ENST00000241393 ZCCHC3Q9NUD5 404 aaKnown RBP7.32□□□□□ -1.24
CXCR4-201ENST00000241393 MRPS18AQ9NVS2 196 aaKnown RBP7.32□□□□□ -1.24
CXCR4-201ENST00000241393 TEX10Q9NXF1 929 aaPredicted RBP7.32□□□□□ -1.24
CXCR4-201ENST00000241393 CALML5Q9NZT1 146 aa7.32□□□□□ -1.24
CXCR4-201ENST00000241393 A4GNTQ9UNA3 340 aa7.32□□□□□ -1.24
CXCR4-201ENST00000241393 NOX1Q9Y5S8 564 aa7.32□□□□□ -1.24
CXCR4-201ENST00000241393 LOC100506127A0A0U1RQW1 187 aa7.32□□□□□ -1.24
CXCR4-201ENST00000241393 FEZF1A0PJY2 475 aa7.32□□□□□ -1.24
CXCR4-201ENST00000241393 SNTNA6NMZ2 147 aa7.32□□□□□ -1.24
CXCR4-201ENST00000241393 HAT1O14929 419 aa7.32□□□□□ -1.24
CXCR4-201ENST00000241393 ENTPD6O75354 484 aa7.32□□□□□ -1.24
CXCR4-201ENST00000241393 NME6O75414 186 aaPredicted RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms