RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 RPH3AQ9Y2J0 694 aaPredicted RBP12.59□□□□□ -0.39
NEK4-201ENST00000233027 ASB4Q9Y574 426 aa12.59□□□□□ -0.39
NEK4-201ENST00000233027 EIF3FO00303 357 aaPredicted RBP12.59□□□□□ -0.39
NEK4-201ENST00000233027 ZNF254O75437 659 aa12.59□□□□□ -0.39
NEK4-201ENST00000233027 HNRNPA1P09651 372 aaKnown RBP eCLIP12.59□□□□□ -0.39
NEK4-201ENST00000233027 CDK2P24941 298 aa12.59□□□□□ -0.39
NEK4-201ENST00000233027 SLC5A2P31639 672 aa12.59□□□□□ -0.39
NEK4-201ENST00000233027 CTSCP53634 463 aa12.59□□□□□ -0.39
NEK4-201ENST00000233027 BADQ92934 168 aa12.59□□□□□ -0.39
NEK4-201ENST00000233027 ATOH8Q96SQ7 321 aa12.59□□□□□ -0.39
NEK4-201ENST00000233027 ANTXRLA6NF34 631 aa12.59□□□□□ -0.39
NEK4-201ENST00000233027 CPOXP36551 454 aa12.59□□□□□ -0.39
NEK4-201ENST00000233027 SOX9P48436 509 aa12.59□□□□□ -0.39
NEK4-201ENST00000233027 MRPL10Q7Z7H8 261 aaKnown RBP12.59□□□□□ -0.39
NEK4-201ENST00000233027 ALDH16A1Q8IZ83 802 aa12.59□□□□□ -0.39
NEK4-201ENST00000233027 OR2T11Q8NH01 316 aa12.59□□□□□ -0.39
NEK4-201ENST00000233027 SNAPC3Q92966 411 aa12.59□□□□□ -0.39
NEK4-201ENST00000233027 SGCZQ96LD1 299 aa12.59□□□□□ -0.39
NEK4-201ENST00000233027 RHBDD3Q9Y3P4 386 aa12.59□□□□□ -0.39
NEK4-201ENST00000233027 OTOL1A6NHN0 477 aaPredicted RBP12.59□□□□□ -0.39
NEK4-201ENST00000233027 TSPAN15O95858 294 aa12.59□□□□□ -0.39
NEK4-201ENST00000233027 AKAIN1P0CW23 69 aa12.59□□□□□ -0.39
NEK4-201ENST00000233027 ENDOUP21128 410 aaKnown RBP12.59□□□□□ -0.39
NEK4-201ENST00000233027 OR2G6Q5TZ20 316 aa12.59□□□□□ -0.39
NEK4-201ENST00000233027 DPY19L2P1Q6NXN4 242 aa12.59□□□□□ -0.39
NEK4-201ENST00000233027 PDZD3Q86UT5 571 aa12.59□□□□□ -0.39
NEK4-201ENST00000233027 CNTN4Q8IWV2 1026 aa12.59□□□□□ -0.39
NEK4-201ENST00000233027 HORMAD2Q8N7B1 307 aa12.59□□□□□ -0.39
NEK4-201ENST00000233027 ACOT4Q8N9L9 421 aa12.59□□□□□ -0.39
NEK4-201ENST00000233027 RANGRFQ9HD47 186 aaPredicted RBP12.59□□□□□ -0.39
NEK4-201ENST00000233027 CD300AQ9UGN4 299 aa12.59□□□□□ -0.39
NEK4-201ENST00000233027 DRGXA6NNA5 263 aa12.58□□□□□ -0.39
NEK4-201ENST00000233027 CTDSP2O14595 271 aa12.58□□□□□ -0.39
NEK4-201ENST00000233027 CTHP32929 405 aa12.58□□□□□ -0.39
NEK4-201ENST00000233027 RAB40BQ12829 278 aa12.58□□□□□ -0.39
NEK4-201ENST00000233027 LILRB2Q8N423 598 aa12.58□□□□□ -0.39
NEK4-201ENST00000233027 OR52R1Q8NGF1 315 aa12.58□□□□□ -0.39
NEK4-201ENST00000233027 TMEM163Q8TC26 289 aa12.58□□□□□ -0.39
NEK4-201ENST00000233027 GTF2H4Q92759 462 aa12.58□□□□□ -0.39
NEK4-201ENST00000233027 MUL1Q969V5 352 aa12.58□□□□□ -0.39
NEK4-201ENST00000233027 TMEM68Q96MH6 324 aa12.58□□□□□ -0.39
NEK4-201ENST00000233027 AP1S3Q96PC3 154 aa12.58□□□□□ -0.39
NEK4-201ENST00000233027 RPS10P5Q9NQ39 176 aa12.58□□□□□ -0.39
NEK4-201ENST00000233027 VDAC3Q9Y277 283 aa12.58□□□□□ -0.39
NEK4-201ENST00000233027 CAV2P51636 162 aa12.58□□□□□ -0.4
NEK4-201ENST00000233027 WDR5P61964 334 aaKnown RBP12.58□□□□□ -0.4
NEK4-201ENST00000233027 HNRNPKP61978 463 aaKnown RBP eCLIP12.58□□□□□ -0.4
NEK4-201ENST00000233027 SYPL1Q16563 259 aa12.58□□□□□ -0.4
NEK4-201ENST00000233027 GDPGP1Q6ZNW5 385 aa12.58□□□□□ -0.4
NEK4-201ENST00000233027 OR4D6Q8NGJ1 314 aa12.58□□□□□ -0.4
NEK4-201ENST00000233027 MYLIPQ8WY64 445 aa12.58□□□□□ -0.4
NEK4-201ENST00000233027 OR7D2Q96RA2 312 aa12.58□□□□□ -0.4
NEK4-201ENST00000233027 RBM24Q9BX46 236 aaKnown RBP12.58□□□□□ -0.4
NEK4-201ENST00000233027 HINT2Q9BX68 163 aa12.58□□□□□ -0.4
NEK4-201ENST00000233027 TAS2R16Q9NYV7 291 aa12.58□□□□□ -0.4
NEK4-201ENST00000233027 LRFN1Q9P244 771 aa12.58□□□□□ -0.4
NEK4-201ENST00000233027 NCDNQ9UBB6 729 aa12.58□□□□□ -0.4
NEK4-201ENST00000233027 ZNF443Q9Y2A4 671 aaPredicted RBP12.58□□□□□ -0.4
NEK4-201ENST00000233027 NAALAD2Q9Y3Q0 740 aa12.58□□□□□ -0.4
NEK4-201ENST00000233027 TRBV4-1A0A0J9YWV2 114 aa12.58□□□□□ -0.4
NEK4-201ENST00000233027 VSTM5A8MXK1 200 aa12.58□□□□□ -0.4
NEK4-201ENST00000233027 C17orf105B2RV13 164 aa12.58□□□□□ -0.4
NEK4-201ENST00000233027 BMP4P12644 408 aa12.58□□□□□ -0.4
NEK4-201ENST00000233027 DAPP51397 102 aa12.58□□□□□ -0.4
NEK4-201ENST00000233027 GPR50Q13585 617 aa12.58□□□□□ -0.4
NEK4-201ENST00000233027 ZNF674Q2M3X9 581 aa12.58□□□□□ -0.4
NEK4-201ENST00000233027 AKR1C8PQ5T2L2 129 aa12.58□□□□□ -0.4
NEK4-201ENST00000233027 TMEM185AQ8NFB2 350 aa12.58□□□□□ -0.4
NEK4-201ENST00000233027 POU2F3Q9UKI9 436 aa12.58□□□□□ -0.4
NEK4-201ENST00000233027 UNCXA6NJT0 531 aa12.58□□□□□ -0.4
NEK4-201ENST00000233027 POM121CA8CG34 1229 aa12.58□□□□□ -0.4
NEK4-201ENST00000233027 F5H5K5 113 aa12.58□□□□□ -0.4
NEK4-201ENST00000233027 ZNF43P17038 809 aa12.58□□□□□ -0.4
NEK4-201ENST00000233027 ITGB8P26012 769 aa12.58□□□□□ -0.4
NEK4-201ENST00000233027 MAOBP27338 520 aa12.58□□□□□ -0.4
NEK4-201ENST00000233027 NTSR1P30989 418 aa12.58□□□□□ -0.4
NEK4-201ENST00000233027 CLDN2P57739 230 aa12.58□□□□□ -0.4
NEK4-201ENST00000233027 BEX5Q5H9J7 111 aa12.58□□□□□ -0.4
NEK4-201ENST00000233027 CD163Q86VB7 1156 aa12.58□□□□□ -0.4
NEK4-201ENST00000233027 IL17RDQ8NFM7 739 aa12.58□□□□□ -0.4
NEK4-201ENST00000233027 BPIFA2Q96DR5 249 aa12.58□□□□□ -0.4
NEK4-201ENST00000233027 FAM227AF5H4B4 570 aa12.58□□□□□ -0.4
NEK4-201ENST00000233027 OPN1LWP04000 364 aa12.58□□□□□ -0.4
NEK4-201ENST00000233027 ALPLP05186 524 aa12.58□□□□□ -0.4
NEK4-201ENST00000233027 CSF1P09603 554 aa12.58□□□□□ -0.4
NEK4-201ENST00000233027 PRAMEF8Q5VWM4 474 aa12.58□□□□□ -0.4
NEK4-201ENST00000233027 PRAMEF7Q5VXH5 474 aa12.58□□□□□ -0.4
NEK4-201ENST00000233027 ZNF529Q6P280 563 aa12.58□□□□□ -0.4
NEK4-201ENST00000233027 SHISA6Q6ZSJ9 500 aa12.58□□□□□ -0.4
NEK4-201ENST00000233027 LSMEM2Q8N112 164 aa12.58□□□□□ -0.4
NEK4-201ENST00000233027 LILRA2Q8N149 483 aa12.58□□□□□ -0.4
NEK4-201ENST00000233027 CDRT4Q8N9R6 151 aa12.58□□□□□ -0.4
NEK4-201ENST00000233027 OR52E1Q8NGJ3 308 aa12.58□□□□□ -0.4
NEK4-201ENST00000233027 SFXN5Q8TD22 340 aa12.58□□□□□ -0.4
NEK4-201ENST00000233027 PAQR8Q8TEZ7 354 aa12.58□□□□□ -0.4
NEK4-201ENST00000233027 ARL11Q969Q4 196 aa12.58□□□□□ -0.4
NEK4-201ENST00000233027 SMIM3Q9BZL3 60 aa12.58□□□□□ -0.4
NEK4-201ENST00000233027 APMAPQ9HDC9 416 aa12.58□□□□□ -0.4
NEK4-201ENST00000233027 DZANK1Q9NVP4 752 aa12.58□□□□□ -0.4
NEK4-201ENST00000233027 ACTR10Q9NZ32 417 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms