RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 TIGD2Q4W5G0 525 aa12.43□□□□□ -0.42
VEGFA-201ENST00000230480 FBXW10Q5XX13 1052 aa12.43□□□□□ -0.42
VEGFA-201ENST00000230480 TYW3Q6IPR3 259 aaKnown RBP12.43□□□□□ -0.42
VEGFA-201ENST00000230480 ZNF585AQ6P3V2 769 aa12.43□□□□□ -0.42
VEGFA-201ENST00000230480 FRRS1Q6ZNA5 592 aa12.43□□□□□ -0.42
VEGFA-201ENST00000230480 RETREG3Q86VR2 466 aa12.43□□□□□ -0.42
VEGFA-201ENST00000230480 MIER2Q8N344 545 aa12.43□□□□□ -0.42
VEGFA-201ENST00000230480 ANKFN1Q8N957 763 aa12.43□□□□□ -0.42
VEGFA-201ENST00000230480 DYDC1Q8WWB3 177 aa12.43□□□□□ -0.42
VEGFA-201ENST00000230480 C1GALT1C1Q96EU7 318 aa12.43□□□□□ -0.42
VEGFA-201ENST00000230480 SLC35G5Q96KT7 338 aa12.43□□□□□ -0.42
VEGFA-201ENST00000230480 IKZF5Q9H5V7 419 aa12.43□□□□□ -0.42
VEGFA-201ENST00000230480 LDAHQ9H6V9 325 aa12.43□□□□□ -0.42
VEGFA-201ENST00000230480 NPHS2Q9NP85 383 aa12.43□□□□□ -0.42
VEGFA-201ENST00000230480 UBQLN4Q9NRR5 601 aa12.43□□□□□ -0.42
VEGFA-201ENST00000230480 FGFR1OP2Q9NVK5 253 aa12.43□□□□□ -0.42
VEGFA-201ENST00000230480 DCTN4Q9UJW0 460 aa12.43□□□□□ -0.42
VEGFA-201ENST00000230480 ICAM5Q9UMF0 924 aa12.43□□□□□ -0.42
VEGFA-201ENST00000230480 FAF1Q9UNN5 650 aaPredicted RBP12.43□□□□□ -0.42
VEGFA-201ENST00000230480 PCDHGB3Q9Y5G1 929 aa12.43□□□□□ -0.42
VEGFA-201ENST00000230480 PRR14LQ5THK1 2151 aa12.43□□□□□ -0.42
VEGFA-201ENST00000230480 FREM1Q5H8C1 2179 aa12.42□□□□□ -0.42
VEGFA-201ENST00000230480 A0A0G2JNJ9 132 aa12.42□□□□□ -0.42
VEGFA-201ENST00000230480 ANKRD65E5RJM6 399 aa12.42□□□□□ -0.42
VEGFA-201ENST00000230480 TNFRSF21O75509 655 aa12.42□□□□□ -0.42
VEGFA-201ENST00000230480 CHRM4P08173 479 aa12.42□□□□□ -0.42
VEGFA-201ENST00000230480 GUSBP08236 651 aa12.42□□□□□ -0.42
VEGFA-201ENST00000230480 NUDT7P0C024 238 aa12.42□□□□□ -0.42
VEGFA-201ENST00000230480 CPN1P15169 458 aa12.42□□□□□ -0.42
VEGFA-201ENST00000230480 IL11P20809 199 aa12.42□□□□□ -0.42
VEGFA-201ENST00000230480 TCEA1P23193 301 aaKnown RBP12.42□□□□□ -0.42
VEGFA-201ENST00000230480 LSP1P33241 339 aa12.42□□□□□ -0.42
VEGFA-201ENST00000230480 ATP4BP51164 291 aa12.42□□□□□ -0.42
VEGFA-201ENST00000230480 ATP12AP54707 1039 aa12.42□□□□□ -0.42
VEGFA-201ENST00000230480 ZNF117Q03924 483 aa12.42□□□□□ -0.42
VEGFA-201ENST00000230480 TOMM34Q15785 309 aaPredicted RBP12.42□□□□□ -0.42
VEGFA-201ENST00000230480 ZNF141Q15928 474 aa12.42□□□□□ -0.42
VEGFA-201ENST00000230480 SYPL1Q16563 259 aa12.42□□□□□ -0.42
VEGFA-201ENST00000230480 DLEU7Q6UYE1 221 aa12.42□□□□□ -0.42
VEGFA-201ENST00000230480 DNAJC14Q6Y2X3 702 aaPredicted RBP12.42□□□□□ -0.42
VEGFA-201ENST00000230480 ZNF621Q6ZSS3 439 aa12.42□□□□□ -0.42
VEGFA-201ENST00000230480 MAMDC2Q7Z304 686 aaPredicted RBP12.42□□□□□ -0.42
VEGFA-201ENST00000230480 HMGN2P46Q86SG4 172 aa12.42□□□□□ -0.42
VEGFA-201ENST00000230480 CCDC71Q8IV32 467 aaPredicted RBP12.42□□□□□ -0.42
VEGFA-201ENST00000230480 ZNF808Q8N4W9 903 aaPredicted RBP12.42□□□□□ -0.42
VEGFA-201ENST00000230480 ABTB1Q969K4 478 aaPredicted RBP12.42□□□□□ -0.42
VEGFA-201ENST00000230480 SARAFQ96BY9 339 aa12.42□□□□□ -0.42
VEGFA-201ENST00000230480 PANX1Q96RD7 426 aa12.42□□□□□ -0.42
VEGFA-201ENST00000230480 SLC38A1Q9H2H9 487 aa12.42□□□□□ -0.42
VEGFA-201ENST00000230480 TP63Q9H3D4 680 aaPredicted RBP12.42□□□□□ -0.42
VEGFA-201ENST00000230480 TAS2R10Q9NYW0 307 aa12.42□□□□□ -0.42
VEGFA-201ENST00000230480 PPP4R1LQ9P1A2 415 aa12.42□□□□□ -0.42
VEGFA-201ENST00000230480 B4GALT7Q9UBV7 327 aa12.42□□□□□ -0.42
VEGFA-201ENST00000230480 Q9UFV3 132 aa12.42□□□□□ -0.42
VEGFA-201ENST00000230480 ACAD8Q9UKU7 415 aa12.42□□□□□ -0.42
VEGFA-201ENST00000230480 RNF6Q9Y252 685 aa12.42□□□□□ -0.42
VEGFA-201ENST00000230480 RPH3AQ9Y2J0 694 aaPredicted RBP12.42□□□□□ -0.42
VEGFA-201ENST00000230480 ZNF337Q9Y3M9 751 aa12.42□□□□□ -0.42
VEGFA-201ENST00000230480 CHST2Q9Y4C5 530 aa12.42□□□□□ -0.42
VEGFA-201ENST00000230480 PCDHB14Q9Y5E9 798 aa12.42□□□□□ -0.42
VEGFA-201ENST00000230480 APCP25054 2843 aa12.41□□□□□ -0.42
VEGFA-201ENST00000230480 C15orf38-AP3S2A0A0A6YYH1 394 aa12.41□□□□□ -0.42
VEGFA-201ENST00000230480 OR2M5A3KFT3 312 aa12.41□□□□□ -0.42
VEGFA-201ENST00000230480 CLDN24A6NM45 220 aa12.41□□□□□ -0.42
VEGFA-201ENST00000230480 FAM107AO95990 144 aa12.41□□□□□ -0.42
VEGFA-201ENST00000230480 LINGO3P0C6S8 592 aa12.41□□□□□ -0.42
VEGFA-201ENST00000230480 ZNF708P17019 499 aa12.41□□□□□ -0.42
VEGFA-201ENST00000230480 CEACAM8P31997 349 aaPredicted RBP12.41□□□□□ -0.42
VEGFA-201ENST00000230480 DCTP40126 519 aa12.41□□□□□ -0.42
VEGFA-201ENST00000230480 MDH1P40925 334 aaKnown RBP12.41□□□□□ -0.42
VEGFA-201ENST00000230480 PSMD4P55036 377 aaKnown RBP12.41□□□□□ -0.42
VEGFA-201ENST00000230480 DSCR4P56555 118 aaPredicted RBP12.41□□□□□ -0.42
VEGFA-201ENST00000230480 CHRNEQ04844 493 aa12.41□□□□□ -0.42
VEGFA-201ENST00000230480 TFF3Q07654 80 aa12.41□□□□□ -0.42
VEGFA-201ENST00000230480 C17orf67Q0P5P2 114 aa12.41□□□□□ -0.42
VEGFA-201ENST00000230480 PMPCAQ10713 525 aa12.41□□□□□ -0.42
VEGFA-201ENST00000230480 SF3A3Q12874 501 aaKnown RBP eCLIP12.41□□□□□ -0.429e-12■■■■■ 32
VEGFA-201ENST00000230480 ACSF3Q4G176 576 aaPredicted RBP12.41□□□□□ -0.42
VEGFA-201ENST00000230480 LRIF1Q5T3J3 769 aa12.41□□□□□ -0.42
VEGFA-201ENST00000230480 C1orf185Q5T7R7 199 aa12.41□□□□□ -0.42
VEGFA-201ENST00000230480 RPTNQ6XPR3 784 aa12.41□□□□□ -0.42
VEGFA-201ENST00000230480 MSANTD1Q6ZTZ1 278 aa12.41□□□□□ -0.42
VEGFA-201ENST00000230480 ACAD11Q709F0 780 aa12.41□□□□□ -0.42
VEGFA-201ENST00000230480 PNPT1Q8TCS8 783 aaKnown RBP12.41□□□□□ -0.42
VEGFA-201ENST00000230480 XAGE5Q8WWM1 108 aa12.41□□□□□ -0.42
VEGFA-201ENST00000230480 ROPN1LQ96C74 230 aa12.41□□□□□ -0.42
VEGFA-201ENST00000230480 TUBA1CQ9BQE3 449 aa12.41□□□□□ -0.42
VEGFA-201ENST00000230480 NMUR2Q9GZQ4 415 aa12.41□□□□□ -0.42
VEGFA-201ENST00000230480 QRSL1Q9H0R6 528 aaKnown RBP12.41□□□□□ -0.42
VEGFA-201ENST00000230480 CCDC167Q9P0B6 97 aa12.41□□□□□ -0.42
VEGFA-201ENST00000230480 MRTO4Q9UKD2 239 aaKnown RBP12.41□□□□□ -0.42
VEGFA-201ENST00000230480 MKLN1Q9UL63 735 aa12.41□□□□□ -0.42
VEGFA-201ENST00000230480 GMEB1Q9Y692 573 aa12.41□□□□□ -0.42
VEGFA-201ENST00000230480 ETV2O00321 342 aaPredicted RBP12.4□□□□□ -0.42
VEGFA-201ENST00000230480 NDUFB5O43674 189 aa12.4□□□□□ -0.42
VEGFA-201ENST00000230480 GMFGO60234 142 aa12.4□□□□□ -0.42
VEGFA-201ENST00000230480 KIAA0513O60268 411 aa12.4□□□□□ -0.42
VEGFA-201ENST00000230480 NTN1O95631 604 aa12.4□□□□□ -0.42
VEGFA-201ENST00000230480 EPPINO95925 133 aa12.4□□□□□ -0.42
VEGFA-201ENST00000230480 ACTL6AO96019 429 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms