RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 GPR34Q9UPC5 381 aa14.06□□□□□ -0.16
EFNB1-201ENST00000204961 DSPPQ9NZW4 1301 aa14.06□□□□□ -0.16
EFNB1-201ENST00000204961 A0A087WV48 116 aa14.06□□□□□ -0.16
EFNB1-201ENST00000204961 A0A1W2PRQ8 180 aa14.06□□□□□ -0.16
EFNB1-201ENST00000204961 GXYLT2A0PJZ3 443 aa14.06□□□□□ -0.16
EFNB1-201ENST00000204961 ALX3O95076 343 aa14.06□□□□□ -0.16
EFNB1-201ENST00000204961 SRPRAP08240 638 aaKnown RBP14.06□□□□□ -0.16
EFNB1-201ENST00000204961 PPP2CBP62714 309 aa14.06□□□□□ -0.16
EFNB1-201ENST00000204961 PPP2CAP67775 309 aa14.06□□□□□ -0.16
EFNB1-201ENST00000204961 SHC2P98077 582 aa14.06□□□□□ -0.16
EFNB1-201ENST00000204961 PDGFRLQ15198 375 aa14.06□□□□□ -0.16
EFNB1-201ENST00000204961 SLC25A35Q3KQZ1 300 aa14.06□□□□□ -0.16
EFNB1-201ENST00000204961 LINC00299Q6ZSB3 139 aa14.06□□□□□ -0.16
EFNB1-201ENST00000204961 PRSS58Q8IYP2 241 aa14.06□□□□□ -0.16
EFNB1-201ENST00000204961 OR4N2Q8NGD1 307 aa14.06□□□□□ -0.16
EFNB1-201ENST00000204961 OR6K6Q8NGW6 343 aa14.06□□□□□ -0.16
EFNB1-201ENST00000204961 OR52D1Q9H346 318 aa14.06□□□□□ -0.16
EFNB1-201ENST00000204961 IDSB3KWA1 339 aa14.05□□□□□ -0.16
EFNB1-201ENST00000204961 LYRM1O43325 122 aa14.05□□□□□ -0.16
EFNB1-201ENST00000204961 DOK2O60496 412 aa14.05□□□□□ -0.16
EFNB1-201ENST00000204961 OR5F1O95221 314 aa14.05□□□□□ -0.16
EFNB1-201ENST00000204961 SNRPBP14678 240 aaKnown RBP14.05□□□□□ -0.16
EFNB1-201ENST00000204961 UQCRC1P31930 480 aa14.05□□□□□ -0.16
EFNB1-201ENST00000204961 GABRA3P34903 492 aa14.05□□□□□ -0.16
EFNB1-201ENST00000204961 C21orf58P58505 322 aa14.05□□□□□ -0.16
EFNB1-201ENST00000204961 MRPL28Q13084 256 aaKnown RBP14.05□□□□□ -0.16
EFNB1-201ENST00000204961 PUS10Q3MIT2 529 aaKnown RBP14.05□□□□□ -0.16
EFNB1-201ENST00000204961 PLK5Q496M5 336 aa14.05□□□□□ -0.16
EFNB1-201ENST00000204961 PRRT3Q5FWE3 981 aa14.05□□□□□ -0.16
EFNB1-201ENST00000204961 C17orf47Q8NEP4 570 aa14.05□□□□□ -0.16
EFNB1-201ENST00000204961 SDR9C7Q8NEX9 313 aa14.05□□□□□ -0.16
EFNB1-201ENST00000204961 UPRTQ96BW1 309 aa14.05□□□□□ -0.16
EFNB1-201ENST00000204961 SLC25A18Q9H1K4 315 aa14.05□□□□□ -0.16
EFNB1-201ENST00000204961 ABCG5Q9H222 651 aa14.05□□□□□ -0.16
EFNB1-201ENST00000204961 POLMQ9NP87 494 aaPredicted RBP14.05□□□□□ -0.16
EFNB1-201ENST00000204961 AK6Q9Y3D8 172 aaKnown RBP14.05□□□□□ -0.16
EFNB1-201ENST00000204961 A0A0A6YYD5 115 aa14.05□□□□□ -0.16
EFNB1-201ENST00000204961 CENPBD1B2RD01 187 aa14.05□□□□□ -0.16
EFNB1-201ENST00000204961 MAKP20794 623 aa14.05□□□□□ -0.16
EFNB1-201ENST00000204961 TEAD1P28347 426 aa14.05□□□□□ -0.16
EFNB1-201ENST00000204961 CCR6P51684 374 aa14.05□□□□□ -0.16
EFNB1-201ENST00000204961 PGDP52209 483 aa14.05□□□□□ -0.16
EFNB1-201ENST00000204961 DSG2Q14126 1118 aa14.05□□□□□ -0.16
EFNB1-201ENST00000204961 SFRP4Q6FHJ7 346 aaPredicted RBP14.05□□□□□ -0.16
EFNB1-201ENST00000204961 WDR88Q6ZMY6 472 aa14.05□□□□□ -0.16
EFNB1-201ENST00000204961 KLHL36Q8N4N3 616 aa14.05□□□□□ -0.16
EFNB1-201ENST00000204961 FAM26EQ8N5C1 309 aa14.05□□□□□ -0.16
EFNB1-201ENST00000204961 OR8H1Q8NGG4 311 aa14.05□□□□□ -0.16
EFNB1-201ENST00000204961 SMARCD2Q92925 531 aa14.05□□□□□ -0.16
EFNB1-201ENST00000204961 TMEM106CQ9BVX2 250 aa14.05□□□□□ -0.16
EFNB1-201ENST00000204961 ENAMQ9NRM1 1142 aa14.05□□□□□ -0.16
EFNB1-201ENST00000204961 NUDT15Q9NV35 164 aa14.05□□□□□ -0.16
EFNB1-201ENST00000204961 ASB4Q9Y574 426 aa14.05□□□□□ -0.16
EFNB1-201ENST00000204961 SDK2Q58EX2 2172 aa14.05□□□□□ -0.16
EFNB1-201ENST00000204961 KIAA1671Q9BY89 1806 aa14.05□□□□□ -0.16
EFNB1-201ENST00000204961 OR6C74A6NCV1 312 aa14.05□□□□□ -0.16
EFNB1-201ENST00000204961 P2RX6O15547 441 aa14.05□□□□□ -0.16
EFNB1-201ENST00000204961 SCO2O43819 266 aa14.05□□□□□ -0.16
EFNB1-201ENST00000204961 PCSK2P16519 638 aa14.05□□□□□ -0.16
EFNB1-201ENST00000204961 PEBP1P30086 187 aaKnown RBP14.05□□□□□ -0.16
EFNB1-201ENST00000204961 ZNF33BQ06732 778 aa14.05□□□□□ -0.16
EFNB1-201ENST00000204961 PRPF38BQ5VTL8 546 aaKnown RBP14.05□□□□□ -0.16
EFNB1-201ENST00000204961 FAAP20Q6NZ36 180 aa14.05□□□□□ -0.16
EFNB1-201ENST00000204961 VWA5B2Q8N398 1253 aa14.05□□□□□ -0.16
EFNB1-201ENST00000204961 LRRC17Q8N6Y2 441 aa14.05□□□□□ -0.16
EFNB1-201ENST00000204961 COX18Q8N8Q8 333 aa14.05□□□□□ -0.16
EFNB1-201ENST00000204961 OR4D9Q8NGE8 314 aa14.05□□□□□ -0.16
EFNB1-201ENST00000204961 LRIG1Q96JA1 1093 aa14.05□□□□□ -0.16
EFNB1-201ENST00000204961 SNX18Q96RF0 628 aa14.05□□□□□ -0.16
EFNB1-201ENST00000204961 CCDC32Q9BV29 185 aa14.05□□□□□ -0.16
EFNB1-201ENST00000204961 ALG8Q9BVK2 526 aa14.05□□□□□ -0.16
EFNB1-201ENST00000204961 UBQLN3Q9H347 655 aa14.05□□□□□ -0.16
EFNB1-201ENST00000204961 ANKHQ9HCJ1 492 aa14.05□□□□□ -0.16
EFNB1-201ENST00000204961 GTF2A1LQ9UNN4 478 aa14.05□□□□□ -0.16
EFNB1-201ENST00000204961 PRELID1Q9Y255 219 aa14.05□□□□□ -0.16
EFNB1-201ENST00000204961 DOCK8Q8NF50 2099 aa14.04□□□□□ -0.16
EFNB1-201ENST00000204961 INMT-MINDY4F8WBC2 141 aa14.04□□□□□ -0.16
EFNB1-201ENST00000204961 MRPS14O60783 128 aaKnown RBP14.04□□□□□ -0.16
EFNB1-201ENST00000204961 YES1P07947 543 aa14.04□□□□□ -0.16
EFNB1-201ENST00000204961 ZNF658BQ4V348 819 aaPredicted RBP14.04□□□□□ -0.16
EFNB1-201ENST00000204961 MRPL2Q5T653 305 aaKnown RBP14.04□□□□□ -0.16
EFNB1-201ENST00000204961 AGBL4Q5VU57 503 aa14.04□□□□□ -0.16
EFNB1-201ENST00000204961 MEDAGQ5VYS4 303 aa14.04□□□□□ -0.16
EFNB1-201ENST00000204961 C1orf94Q6P1W5 598 aa14.04□□□□□ -0.16
EFNB1-201ENST00000204961 FAM98AQ8NCA5 519 aaKnown RBP14.04□□□□□ -0.16
EFNB1-201ENST00000204961 SPATA5L1Q9BVQ7 753 aa14.04□□□□□ -0.16
EFNB1-201ENST00000204961 LINC01553A4QN01 128 aa14.04□□□□□ -0.16
EFNB1-201ENST00000204961 A8MUA0 341 aa14.04□□□□□ -0.16
EFNB1-201ENST00000204961 EMC8O43402 210 aa14.04□□□□□ -0.16
EFNB1-201ENST00000204961 RPL4P36578 427 aaKnown RBP14.04□□□□□ -0.16
EFNB1-201ENST00000204961 C7orf61Q8IZ16 206 aa14.04□□□□□ -0.16
EFNB1-201ENST00000204961 OR4M1Q8NGD0 313 aa14.04□□□□□ -0.16
EFNB1-201ENST00000204961 FANK1Q8TC84 345 aa14.04□□□□□ -0.16
EFNB1-201ENST00000204961 WDR34Q96EX3 536 aa14.04□□□□□ -0.16
EFNB1-201ENST00000204961 CCDC120Q96HB5 630 aa14.04□□□□□ -0.16
EFNB1-201ENST00000204961 METTL2AQ96IZ6 378 aaKnown RBP14.04□□□□□ -0.16
EFNB1-201ENST00000204961 C4orf36Q96KX1 117 aa14.04□□□□□ -0.16
EFNB1-201ENST00000204961 PDCD1LG2Q9BQ51 273 aa14.04□□□□□ -0.16
EFNB1-201ENST00000204961 SLC17A9Q9BYT1 436 aa14.04□□□□□ -0.16
EFNB1-201ENST00000204961 C11orf49Q9H6J7 331 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms