RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 ZNF670-ZNF695F2Z2N8 137 aa7.66□□□□□ -1.18
VAMP3-201ENST00000054666 CTNSO60931 367 aa7.66□□□□□ -1.18
VAMP3-201ENST00000054666 RCBTB2O95199 551 aa7.66□□□□□ -1.18
VAMP3-201ENST00000054666 APOL3O95236 402 aa7.66□□□□□ -1.18
VAMP3-201ENST00000054666 SAGP10523 405 aaPredicted RBP7.66□□□□□ -1.18
VAMP3-201ENST00000054666 PRG2P13727 222 aa7.66□□□□□ -1.18
VAMP3-201ENST00000054666 CPEP16870 476 aa7.66□□□□□ -1.18
VAMP3-201ENST00000054666 PAICSP22234 425 aaKnown RBP7.66□□□□□ -1.18
VAMP3-201ENST00000054666 ETV5P41161 510 aa7.66□□□□□ -1.18
VAMP3-201ENST00000054666 MAP3K8P41279 467 aa7.66□□□□□ -1.18
VAMP3-201ENST00000054666 ETV1P50549 477 aa7.66□□□□□ -1.18
VAMP3-201ENST00000054666 PSMD4P55036 377 aaKnown RBP7.66□□□□□ -1.18
VAMP3-201ENST00000054666 HNRNPKP61978 463 aaKnown RBP eCLIP7.66□□□□□ -1.18
VAMP3-201ENST00000054666 RACK1P63244 317 aaKnown RBP7.66□□□□□ -1.18
VAMP3-201ENST00000054666 DSG2Q14126 1118 aa7.66□□□□□ -1.18
VAMP3-201ENST00000054666 OXA1LQ15070 435 aa7.66□□□□□ -1.18
VAMP3-201ENST00000054666 ZSWIM7Q19AV6 140 aa7.66□□□□□ -1.18
VAMP3-201ENST00000054666 ZNF181Q2M3W8 571 aa7.66□□□□□ -1.18
VAMP3-201ENST00000054666 LRIT3Q3SXY7 679 aa7.66□□□□□ -1.18
VAMP3-201ENST00000054666 AMZ1Q400G9 498 aa7.66□□□□□ -1.18
VAMP3-201ENST00000054666 TCTE1Q5JU00 501 aa7.66□□□□□ -1.18
VAMP3-201ENST00000054666 PDZK1Q5T2W1 519 aa7.66□□□□□ -1.18
VAMP3-201ENST00000054666 PLEKHG7Q6ZR37 379 aa7.66□□□□□ -1.18
VAMP3-201ENST00000054666 BMP8AQ7Z5Y6 402 aa7.66□□□□□ -1.18
VAMP3-201ENST00000054666 PHC2Q8IXK0 858 aa7.66□□□□□ -1.18
VAMP3-201ENST00000054666 ARHGEF39Q8N4T4 335 aa7.66□□□□□ -1.18
VAMP3-201ENST00000054666 BRIX1Q8TDN6 353 aaKnown RBP7.66□□□□□ -1.18
VAMP3-201ENST00000054666 FGF11Q92914 225 aa7.66□□□□□ -1.18
VAMP3-201ENST00000054666 OTULINQ96BN8 352 aa7.66□□□□□ -1.18
VAMP3-201ENST00000054666 ABHD8Q96I13 439 aa7.66□□□□□ -1.18
VAMP3-201ENST00000054666 SAMD8Q96LT4 415 aa7.66□□□□□ -1.18
VAMP3-201ENST00000054666 HS6ST2Q96MM7 605 aa7.66□□□□□ -1.18
VAMP3-201ENST00000054666 ZNF578Q96N58 590 aaPredicted RBP7.66□□□□□ -1.18
VAMP3-201ENST00000054666 NELL2Q99435 816 aa7.66□□□□□ -1.18
VAMP3-201ENST00000054666 PRSS27Q9BQR3 290 aa7.66□□□□□ -1.18
VAMP3-201ENST00000054666 PELOQ9BRX2 385 aaKnown RBP7.66□□□□□ -1.18
VAMP3-201ENST00000054666 DPH1Q9BZG8 443 aa7.66□□□□□ -1.18
VAMP3-201ENST00000054666 TTYH1Q9H313 450 aaPredicted RBP7.66□□□□□ -1.18
VAMP3-201ENST00000054666 OR52D1Q9H346 318 aa7.66□□□□□ -1.18
VAMP3-201ENST00000054666 PDE7BQ9NP56 450 aa7.66□□□□□ -1.18
VAMP3-201ENST00000054666 ABCB10Q9NRK6 738 aa7.66□□□□□ -1.18
VAMP3-201ENST00000054666 FBXO34Q9NWN3 711 aa7.66□□□□□ -1.18
VAMP3-201ENST00000054666 EPHA6Q9UF33 1036 aa7.66□□□□□ -1.18
VAMP3-201ENST00000054666 TMEM265A0A087WTH1 108 aa7.66□□□□□ -1.18
VAMP3-201ENST00000054666 FUOMA2VDF0 154 aa7.66□□□□□ -1.18
VAMP3-201ENST00000054666 FAM86C2PA6NEL3 165 aa7.66□□□□□ -1.18
VAMP3-201ENST00000054666 STK25O00506 426 aa7.66□□□□□ -1.18
VAMP3-201ENST00000054666 CDC42EP2O14613 210 aa7.66□□□□□ -1.18
VAMP3-201ENST00000054666 SLC30A4O14863 429 aa7.66□□□□□ -1.18
VAMP3-201ENST00000054666 AQP9O43315 295 aa7.66□□□□□ -1.18
VAMP3-201ENST00000054666 ZNF749O43361 778 aa7.66□□□□□ -1.18
VAMP3-201ENST00000054666 CHP2O43745 196 aa7.66□□□□□ -1.18
VAMP3-201ENST00000054666 AKAP8O43823 692 aaKnown RBP7.66□□□□□ -1.18
VAMP3-201ENST00000054666 UPK1BO75841 260 aa7.66□□□□□ -1.18
VAMP3-201ENST00000054666 WNT1P04628 370 aa7.66□□□□□ -1.18
VAMP3-201ENST00000054666 HTR1FP30939 366 aa7.66□□□□□ -1.18
VAMP3-201ENST00000054666 RNF144AP50876 292 aaPredicted RBP7.66□□□□□ -1.18
VAMP3-201ENST00000054666 BCAP31P51572 246 aa7.66□□□□□ -1.18
VAMP3-201ENST00000054666 RPL6Q02878 288 aaKnown RBP7.66□□□□□ -1.18
VAMP3-201ENST00000054666 COL13A1Q5TAT6 717 aaPredicted RBP7.66□□□□□ -1.18
VAMP3-201ENST00000054666 CXXC5Q7LFL8 322 aaKnown RBP7.66□□□□□ -1.18
VAMP3-201ENST00000054666 SHISA5Q8N114 240 aa7.66□□□□□ -1.18
VAMP3-201ENST00000054666 KLHL36Q8N4N3 616 aa7.66□□□□□ -1.18
VAMP3-201ENST00000054666 PSD4Q8NDX1 1056 aa7.66□□□□□ -1.18
VAMP3-201ENST00000054666 CADM4Q8NFZ8 388 aa7.66□□□□□ -1.18
VAMP3-201ENST00000054666 PFN4Q8NHR9 129 aa7.66□□□□□ -1.18
VAMP3-201ENST00000054666 GRHL3Q8TE85 626 aa7.66□□□□□ -1.18
VAMP3-201ENST00000054666 HOXB13Q92826 284 aaPredicted RBP7.66□□□□□ -1.18
VAMP3-201ENST00000054666 MMABQ96EY8 250 aaPredicted RBP7.66□□□□□ -1.18
VAMP3-201ENST00000054666 SPACA7Q96KW9 195 aa7.66□□□□□ -1.18
VAMP3-201ENST00000054666 TGM7Q96PF1 710 aa7.66□□□□□ -1.18
VAMP3-201ENST00000054666 G6PC3Q9BUM1 346 aa7.66□□□□□ -1.18
VAMP3-201ENST00000054666 TRIM2Q9C040 744 aa7.66□□□□□ -1.18
VAMP3-201ENST00000054666 FN3KQ9H479 309 aa7.66□□□□□ -1.18
VAMP3-201ENST00000054666 SIAEQ9HAT2 523 aa7.66□□□□□ -1.18
VAMP3-201ENST00000054666 SMURF1Q9HCE7 757 aa7.66□□□□□ -1.18
VAMP3-201ENST00000054666 ISYNA1Q9NPH2 558 aa7.66□□□□□ -1.18
VAMP3-201ENST00000054666 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.66□□□□□ -1.18
VAMP3-201ENST00000054666 SIDT1Q9NXL6 827 aaKnown RBP7.66□□□□□ -1.18
VAMP3-201ENST00000054666 IL20RAQ9UHF4 553 aa7.66□□□□□ -1.18
VAMP3-201ENST00000054666 KCNE5Q9UJ90 142 aa7.66□□□□□ -1.18
VAMP3-201ENST00000054666 ZNF229Q9UJW7 825 aa7.66□□□□□ -1.18
VAMP3-201ENST00000054666 CARD8Q9Y2G2 431 aa7.66□□□□□ -1.18
VAMP3-201ENST00000054666 OR10H1Q9Y4A9 318 aa7.66□□□□□ -1.18
VAMP3-201ENST00000054666 CSNK1G3Q9Y6M4 447 aa7.66□□□□□ -1.18
VAMP3-201ENST00000054666 A0A075B6Q4 140 aa7.65□□□□□ -1.18
VAMP3-201ENST00000054666 A0A1W2PR77 199 aa7.65□□□□□ -1.18
VAMP3-201ENST00000054666 TTC36A6NLP5 189 aa7.65□□□□□ -1.18
VAMP3-201ENST00000054666 RHPN2P1A8MT19 583 aa7.65□□□□□ -1.18
VAMP3-201ENST00000054666 TBX1O43435 398 aa7.65□□□□□ -1.18
VAMP3-201ENST00000054666 HRO43593 1189 aa7.65□□□□□ -1.18
VAMP3-201ENST00000054666 FOXS1O43638 330 aa7.65□□□□□ -1.18
VAMP3-201ENST00000054666 IFNA16P05015 189 aa7.65□□□□□ -1.18
VAMP3-201ENST00000054666 CTSBP07858 339 aa7.65□□□□□ -1.18
VAMP3-201ENST00000054666 GUSBP08236 651 aa7.65□□□□□ -1.18
VAMP3-201ENST00000054666 SSTR4P31391 388 aa7.65□□□□□ -1.18
VAMP3-201ENST00000054666 SLC1A3P43003 542 aa7.65□□□□□ -1.18
VAMP3-201ENST00000054666 CRYBB2P43320 205 aa7.65□□□□□ -1.18
VAMP3-201ENST00000054666 RORCP51449 518 aa7.65□□□□□ -1.18
VAMP3-201ENST00000054666 PGDP52209 483 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms