RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 BCORP1Q8N888 145 aa13.23□□□□□ -0.29
RTFDC1-201ENST00000023939 WDR36Q8NI36 951 aaKnown RBP13.23□□□□□ -0.29
RTFDC1-201ENST00000023939 TMEM255BQ8WV15 326 aa13.23□□□□□ -0.29
RTFDC1-201ENST00000023939 CNOT9Q92600 299 aaKnown RBP13.23□□□□□ -0.29
RTFDC1-201ENST00000023939 OSTF1Q92882 214 aa13.23□□□□□ -0.29
RTFDC1-201ENST00000023939 CRELD1Q96HD1 420 aa13.23□□□□□ -0.29
RTFDC1-201ENST00000023939 FAM46AQ96IP4 442 aaKnown RBP13.23□□□□□ -0.29
RTFDC1-201ENST00000023939 AMBNQ9NP70 447 aa13.23□□□□□ -0.29
RTFDC1-201ENST00000023939 TIMMDC1Q9NPL8 285 aa13.23□□□□□ -0.29
RTFDC1-201ENST00000023939 DNAJB12Q9NXW2 375 aaKnown RBP13.23□□□□□ -0.29
RTFDC1-201ENST00000023939 FBXO4Q9UKT5 387 aa13.23□□□□□ -0.29
RTFDC1-201ENST00000023939 SPTBP11277 2137 aa13.23□□□□□ -0.29
RTFDC1-201ENST00000023939 ADAMTS20P59510 1910 aa13.23□□□□□ -0.29
RTFDC1-201ENST00000023939 COL6A3P12111 3177 aa13.22□□□□□ -0.29
RTFDC1-201ENST00000023939 A0A1W2PQM1 296 aa13.22□□□□□ -0.29
RTFDC1-201ENST00000023939 ENTPD6O75354 484 aa13.22□□□□□ -0.29
RTFDC1-201ENST00000023939 BCAS1O75363 584 aaPredicted RBP13.22□□□□□ -0.29
RTFDC1-201ENST00000023939 STSP08842 583 aa13.22□□□□□ -0.29
RTFDC1-201ENST00000023939 GKN3PP0CG01 181 aa13.22□□□□□ -0.29
RTFDC1-201ENST00000023939 LCN1P31025 176 aa13.22□□□□□ -0.29
RTFDC1-201ENST00000023939 ACAA2P42765 397 aaKnown RBP13.22□□□□□ -0.29
RTFDC1-201ENST00000023939 DYNC1I2Q13409 638 aaKnown RBP13.22□□□□□ -0.29
RTFDC1-201ENST00000023939 PRAMEF17Q5VTA0 474 aa13.22□□□□□ -0.29
RTFDC1-201ENST00000023939 PLAG1Q6DJT9 500 aa13.22□□□□□ -0.29
RTFDC1-201ENST00000023939 RHBDD2Q6NTF9 364 aa13.22□□□□□ -0.29
RTFDC1-201ENST00000023939 ACSM5Q6NUN0 579 aa13.22□□□□□ -0.29
RTFDC1-201ENST00000023939 ZC3H14Q6PJT7 736 aaKnown RBP13.22□□□□□ -0.29
RTFDC1-201ENST00000023939 ZNF550Q7Z398 422 aa13.22□□□□□ -0.29
RTFDC1-201ENST00000023939 TMPRSS9Q7Z410 1059 aa13.22□□□□□ -0.29
RTFDC1-201ENST00000023939 STX19Q8N4C7 294 aa13.22□□□□□ -0.29
RTFDC1-201ENST00000023939 LSMEM1Q8N8F7 131 aa13.22□□□□□ -0.29
RTFDC1-201ENST00000023939 PLPP5Q8NEB5 264 aa13.22□□□□□ -0.29
RTFDC1-201ENST00000023939 HS6ST2Q96MM7 605 aa13.22□□□□□ -0.29
RTFDC1-201ENST00000023939 IL4I1Q96RQ9 567 aa13.22□□□□□ -0.29
RTFDC1-201ENST00000023939 PRRG3Q9BZD7 231 aa13.22□□□□□ -0.29
RTFDC1-201ENST00000023939 PLA2G12AQ9BZM1 189 aa13.22□□□□□ -0.29
RTFDC1-201ENST00000023939 TRIM2Q9C040 744 aa13.22□□□□□ -0.29
RTFDC1-201ENST00000023939 TGIF2Q9GZN2 237 aa13.22□□□□□ -0.29
RTFDC1-201ENST00000023939 HOXD1Q9GZZ0 328 aa13.22□□□□□ -0.29
RTFDC1-201ENST00000023939 GAREM1Q9H706 876 aa13.22□□□□□ -0.29
RTFDC1-201ENST00000023939 TMEM27Q9HBJ8 222 aa13.22□□□□□ -0.29
RTFDC1-201ENST00000023939 RPL36Q9Y3U8 105 aaKnown RBP13.22□□□□□ -0.29
RTFDC1-201ENST00000023939 NUP210LQ5VU65 1888 aa13.22□□□□□ -0.29
RTFDC1-201ENST00000023939 IGLV3-12A0A075B6K2 115 aa13.22□□□□□ -0.29
RTFDC1-201ENST00000023939 A0A0B4J2E0 115 aa13.22□□□□□ -0.29
RTFDC1-201ENST00000023939 A0A1B0GX12 115 aa13.22□□□□□ -0.29
RTFDC1-201ENST00000023939 CPED1A4D0V7 1026 aa13.22□□□□□ -0.29
RTFDC1-201ENST00000023939 POLR1CO15160 346 aaPredicted RBP13.22□□□□□ -0.29
RTFDC1-201ENST00000023939 DDAH2O95865 285 aa13.22□□□□□ -0.29
RTFDC1-201ENST00000023939 PRKCDQ05655 676 aa13.22□□□□□ -0.29
RTFDC1-201ENST00000023939 NFATC3Q12968 1075 aa13.22□□□□□ -0.29
RTFDC1-201ENST00000023939 NCF4Q15080 339 aa13.22□□□□□ -0.29
RTFDC1-201ENST00000023939 CTF1Q16619 201 aa13.22□□□□□ -0.29
RTFDC1-201ENST00000023939 ARHGAP40Q5TG30 622 aa13.22□□□□□ -0.29
RTFDC1-201ENST00000023939 CCDC81Q6ZN84 652 aa13.22□□□□□ -0.29
RTFDC1-201ENST00000023939 ZNF620Q6ZNG0 422 aa13.22□□□□□ -0.29
RTFDC1-201ENST00000023939 SLITRK4Q8IW52 837 aa13.22□□□□□ -0.29
RTFDC1-201ENST00000023939 IQCF1Q8N6M8 205 aa13.22□□□□□ -0.29
RTFDC1-201ENST00000023939 TCEANCQ8N8B7 351 aa13.22□□□□□ -0.29
RTFDC1-201ENST00000023939 OR8D4Q8NGM9 314 aa13.22□□□□□ -0.29
RTFDC1-201ENST00000023939 TSLPQ969D9 159 aa13.22□□□□□ -0.29
RTFDC1-201ENST00000023939 ART5Q96L15 291 aa13.22□□□□□ -0.29
RTFDC1-201ENST00000023939 ZNF426Q9BUY5 554 aa13.22□□□□□ -0.29
RTFDC1-201ENST00000023939 YIPF2Q9BWQ6 316 aa13.22□□□□□ -0.29
RTFDC1-201ENST00000023939 LRRN3Q9H3W5 708 aa13.22□□□□□ -0.29
RTFDC1-201ENST00000023939 TVP23BQ9NYZ1 205 aa13.22□□□□□ -0.29
RTFDC1-201ENST00000023939 CNIH4Q9P003 139 aa13.22□□□□□ -0.29
RTFDC1-201ENST00000023939 TMEM5Q9Y2B1 443 aa13.22□□□□□ -0.29
RTFDC1-201ENST00000023939 OR10H1Q9Y4A9 318 aa13.22□□□□□ -0.29
RTFDC1-201ENST00000023939 CDH10Q9Y6N8 788 aa13.22□□□□□ -0.29
RTFDC1-201ENST00000023939 TRIOO75962 3097 aa13.21□□□□□ -0.29
RTFDC1-201ENST00000023939 A0A1W2PPW3 197 aa13.21□□□□□ -0.3
RTFDC1-201ENST00000023939 FRG2CA6NGY1 282 aa13.21□□□□□ -0.3
RTFDC1-201ENST00000023939 EFCAB7A8K855 629 aa13.21□□□□□ -0.3
RTFDC1-201ENST00000023939 CHP2O43745 196 aa13.21□□□□□ -0.3
RTFDC1-201ENST00000023939 PRKYO43930 277 aa13.21□□□□□ -0.3
RTFDC1-201ENST00000023939 NTN1O95631 604 aa13.21□□□□□ -0.3
RTFDC1-201ENST00000023939 ONECUT2O95948 504 aa13.21□□□□□ -0.3
RTFDC1-201ENST00000023939 RPLP0P05388 317 aaKnown RBP13.21□□□□□ -0.3
RTFDC1-201ENST00000023939 LCKP06239 509 aa13.21□□□□□ -0.3
RTFDC1-201ENST00000023939 PSMB9P28065 219 aa13.21□□□□□ -0.3
RTFDC1-201ENST00000023939 ADH7P40394 386 aa13.21□□□□□ -0.3
RTFDC1-201ENST00000023939 RBM34P42696 430 aaKnown RBP13.21□□□□□ -0.3
RTFDC1-201ENST00000023939 CTBP2P56545 445 aa13.21□□□□□ -0.3
RTFDC1-201ENST00000023939 DCAF7P61962 342 aa13.21□□□□□ -0.3
RTFDC1-201ENST00000023939 CCL7P80098 99 aa13.21□□□□□ -0.3
RTFDC1-201ENST00000023939 MINDY4Q4G0A6 757 aa13.21□□□□□ -0.3
RTFDC1-201ENST00000023939 WDR88Q6ZMY6 472 aa13.21□□□□□ -0.3
RTFDC1-201ENST00000023939 TMPRSS11FQ6ZWK6 438 aa13.21□□□□□ -0.3
RTFDC1-201ENST00000023939 ZNF440Q8IYI8 595 aa13.21□□□□□ -0.3
RTFDC1-201ENST00000023939 OR14A16Q8NHC5 309 aa13.21□□□□□ -0.3
RTFDC1-201ENST00000023939 BRIX1Q8TDN6 353 aaKnown RBP13.21□□□□□ -0.3
RTFDC1-201ENST00000023939 ZNF721Q8TF20 911 aa13.21□□□□□ -0.3
RTFDC1-201ENST00000023939 TMEM239Q8WW34 195 aa13.21□□□□□ -0.3
RTFDC1-201ENST00000023939 SLC38A2Q96QD8 506 aa13.21□□□□□ -0.3
RTFDC1-201ENST00000023939 DSN1Q9H410 356 aa13.21□□□□□ -0.3
RTFDC1-201ENST00000023939 EGLN3Q9H6Z9 239 aa13.21□□□□□ -0.3
RTFDC1-201ENST00000023939 PNO1Q9NRX1 252 aaKnown RBP13.21□□□□□ -0.3
RTFDC1-201ENST00000023939 MED17Q9NVC6 651 aa13.21□□□□□ -0.3
RTFDC1-201ENST00000023939 MRPS18AQ9NVS2 196 aaKnown RBP13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms