RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 TEX10Q9NXF1 929 aaPredicted RBP9.7□□□□□ -0.86
NIPAL3-201ENST00000003912 CDK5RAP2Q96SN8 1893 aa9.7□□□□□ -0.86
NIPAL3-201ENST00000003912 GABBR2O75899 941 aa9.69□□□□□ -0.86
NIPAL3-201ENST00000003912 APOL3O95236 402 aa9.69□□□□□ -0.86
NIPAL3-201ENST00000003912 HOXB9P17482 250 aaPredicted RBP9.69□□□□□ -0.86
NIPAL3-201ENST00000003912 SDHBP21912 280 aa9.69□□□□□ -0.86
NIPAL3-201ENST00000003912 GCAP28676 217 aa9.69□□□□□ -0.86
NIPAL3-201ENST00000003912 SLC19A1P41440 591 aa9.69□□□□□ -0.86
NIPAL3-201ENST00000003912 FRKP42685 505 aaPredicted RBP9.69□□□□□ -0.86
NIPAL3-201ENST00000003912 SLC22A10Q63ZE4 541 aa9.69□□□□□ -0.86
NIPAL3-201ENST00000003912 C3P1Q6ZMU1 363 aa9.69□□□□□ -0.86
NIPAL3-201ENST00000003912 AKAP14Q86UN6 197 aa9.69□□□□□ -0.86
NIPAL3-201ENST00000003912 ZNF740Q8NDX6 193 aa9.69□□□□□ -0.86
NIPAL3-201ENST00000003912 ACOT11Q8WXI4 607 aaPredicted RBP9.69□□□□□ -0.86
NIPAL3-201ENST00000003912 KLHL15Q96M94 604 aa9.69□□□□□ -0.86
NIPAL3-201ENST00000003912 PARPBPQ9NWS1 579 aa9.69□□□□□ -0.86
NIPAL3-201ENST00000003912 WSB2Q9NYS7 404 aaPredicted RBP9.69□□□□□ -0.86
NIPAL3-201ENST00000003912 ZNF337Q9Y3M9 751 aa9.69□□□□□ -0.86
NIPAL3-201ENST00000003912 BRWD3Q6RI45 1802 aa9.69□□□□□ -0.86
NIPAL3-201ENST00000003912 CD1CP29017 333 aa9.69□□□□□ -0.86
NIPAL3-201ENST00000003912 C17orf67Q0P5P2 114 aa9.69□□□□□ -0.86
NIPAL3-201ENST00000003912 C4orf46Q504U0 113 aa9.69□□□□□ -0.86
NIPAL3-201ENST00000003912 TUBA3EQ6PEY2 450 aa9.69□□□□□ -0.86
NIPAL3-201ENST00000003912 KMT5CQ86Y97 462 aa9.69□□□□□ -0.86
NIPAL3-201ENST00000003912 ENDOVQ8N8Q3 282 aaKnown RBP9.69□□□□□ -0.86
NIPAL3-201ENST00000003912 BOLLQ8N9W6 283 aaKnown RBP9.69□□□□□ -0.86
NIPAL3-201ENST00000003912 FRS2Q8WU20 508 aa9.69□□□□□ -0.86
NIPAL3-201ENST00000003912 UCN3Q969E3 161 aa9.69□□□□□ -0.86
NIPAL3-201ENST00000003912 FOLH1BQ9HBA9 442 aa9.69□□□□□ -0.86
NIPAL3-201ENST00000003912 FAM118AQ9NWS6 357 aa9.69□□□□□ -0.86
NIPAL3-201ENST00000003912 TMEM181Q9P2C4 612 aa9.69□□□□□ -0.86
NIPAL3-201ENST00000003912 GPR160Q9UJ42 338 aa9.69□□□□□ -0.86
NIPAL3-201ENST00000003912 DISC1C4P0D8 188 aa9.69□□□□□ -0.86
NIPAL3-201ENST00000003912 CLIC3O95833 236 aa9.69□□□□□ -0.86
NIPAL3-201ENST00000003912 LCATP04180 440 aa9.69□□□□□ -0.86
NIPAL3-201ENST00000003912 IL32P24001 234 aa9.69□□□□□ -0.86
NIPAL3-201ENST00000003912 CYB561P49447 251 aa9.69□□□□□ -0.86
NIPAL3-201ENST00000003912 OR5M10Q6IEU7 315 aa9.69□□□□□ -0.86
NIPAL3-201ENST00000003912 TRIM46Q7Z4K8 759 aa9.69□□□□□ -0.86
NIPAL3-201ENST00000003912 CEACAM19Q7Z692 300 aa9.69□□□□□ -0.86
NIPAL3-201ENST00000003912 RCBTB1Q8NDN9 531 aa9.69□□□□□ -0.86
NIPAL3-201ENST00000003912 BPIFA2Q96DR5 249 aa9.69□□□□□ -0.86
NIPAL3-201ENST00000003912 CHRDQ9H2X0 955 aa9.69□□□□□ -0.86
NIPAL3-201ENST00000003912 CNIH4Q9P003 139 aa9.69□□□□□ -0.86
NIPAL3-201ENST00000003912 CARD8Q9Y2G2 431 aa9.69□□□□□ -0.86
NIPAL3-201ENST00000003912 LOXL2Q9Y4K0 774 aa9.69□□□□□ -0.86
NIPAL3-201ENST00000003912 SLC35F4A4IF30 521 aa9.69□□□□□ -0.86
NIPAL3-201ENST00000003912 L7N2F9 121 aa9.69□□□□□ -0.86
NIPAL3-201ENST00000003912 VNN2O95498 520 aa9.69□□□□□ -0.86
NIPAL3-201ENST00000003912 DDAH2O95865 285 aa9.69□□□□□ -0.86
NIPAL3-201ENST00000003912 MT-ND2P03891 347 aa9.69□□□□□ -0.86
NIPAL3-201ENST00000003912 CTSLP07711 333 aa9.69□□□□□ -0.86
NIPAL3-201ENST00000003912 CAPZBP47756 277 aa9.69□□□□□ -0.86
NIPAL3-201ENST00000003912 VAMP2P63027 116 aa9.69□□□□□ -0.86
NIPAL3-201ENST00000003912 C18orf63Q68DL7 685 aa9.69□□□□□ -0.86
NIPAL3-201ENST00000003912 SLC48A1Q6P1K1 146 aa9.69□□□□□ -0.86
NIPAL3-201ENST00000003912 PAQR7Q86WK9 346 aa9.69□□□□□ -0.86
NIPAL3-201ENST00000003912 MS4A15Q8N5U1 240 aa9.69□□□□□ -0.86
NIPAL3-201ENST00000003912 TEX19Q8NA77 164 aa9.69□□□□□ -0.86
NIPAL3-201ENST00000003912 OR5T2Q8NGG2 359 aa9.69□□□□□ -0.86
NIPAL3-201ENST00000003912 TRUB1Q8WWH5 349 aaKnown RBP9.69□□□□□ -0.86
NIPAL3-201ENST00000003912 BARD1Q99728 777 aaKnown RBP9.69□□□□□ -0.86
NIPAL3-201ENST00000003912 IER3IP1Q9Y5U9 82 aa9.69□□□□□ -0.86
NIPAL3-201ENST00000003912 LOC102725191A0A1B0GVB3 256 aa9.69□□□□□ -0.86
NIPAL3-201ENST00000003912 MRPL33O75394 65 aaKnown RBP9.69□□□□□ -0.86
NIPAL3-201ENST00000003912 CKMT1AP12532 417 aa9.69□□□□□ -0.86
NIPAL3-201ENST00000003912 ELK4P28324 431 aa9.69□□□□□ -0.86
NIPAL3-201ENST00000003912 POU3F4P49335 361 aa9.69□□□□□ -0.86
NIPAL3-201ENST00000003912 PRKCDQ05655 676 aa9.69□□□□□ -0.86
NIPAL3-201ENST00000003912 MZT1Q08AG7 82 aa9.69□□□□□ -0.86
NIPAL3-201ENST00000003912 CCSMST1Q4G0I0 132 aa9.69□□□□□ -0.86
NIPAL3-201ENST00000003912 MRPL21Q7Z2W9 205 aaKnown RBP9.69□□□□□ -0.86
NIPAL3-201ENST00000003912 TSPYL5Q86VY4 417 aaPredicted RBP9.69□□□□□ -0.86
NIPAL3-201ENST00000003912 SNX29P2Q8IUI4 249 aa9.69□□□□□ -0.86
NIPAL3-201ENST00000003912 LSMEM2Q8N112 164 aa9.69□□□□□ -0.86
NIPAL3-201ENST00000003912 ANKK1Q8NFD2 765 aa9.69□□□□□ -0.86
NIPAL3-201ENST00000003912 NEIL3Q8TAT5 605 aa9.69□□□□□ -0.86
NIPAL3-201ENST00000003912 MUCL1Q96DR8 90 aa9.69□□□□□ -0.86
NIPAL3-201ENST00000003912 ZPBPQ9BS86 351 aa9.69□□□□□ -0.86
NIPAL3-201ENST00000003912 USP36Q9P275 1121 aaKnown RBP9.69□□□□□ -0.86
NIPAL3-201ENST00000003912 EMC9Q9Y3B6 208 aa9.69□□□□□ -0.86
NIPAL3-201ENST00000003912 LOXHD1Q8IVV2 1947 aa9.68□□□□□ -0.86
NIPAL3-201ENST00000003912 PRAMEF33A0A0G2JMD5 474 aa9.68□□□□□ -0.86
NIPAL3-201ENST00000003912 XPNPEP2O43895 674 aa9.68□□□□□ -0.86
NIPAL3-201ENST00000003912 PRAMEF10O60809 474 aa9.68□□□□□ -0.86
NIPAL3-201ENST00000003912 CD3GP09693 182 aa9.68□□□□□ -0.86
NIPAL3-201ENST00000003912 FURINP09958 794 aa9.68□□□□□ -0.86
NIPAL3-201ENST00000003912 TNFSF4P23510 183 aa9.68□□□□□ -0.86
NIPAL3-201ENST00000003912 NOVA1P51513 510 aaKnown RBP9.68□□□□□ -0.86
NIPAL3-201ENST00000003912 PCBD1P61457 104 aa9.68□□□□□ -0.86
NIPAL3-201ENST00000003912 OR1Q1Q15612 314 aa9.68□□□□□ -0.86
NIPAL3-201ENST00000003912 SYPL1Q16563 259 aa9.68□□□□□ -0.86
NIPAL3-201ENST00000003912 PRAMEF20Q5VT98 475 aa9.68□□□□□ -0.86
NIPAL3-201ENST00000003912 FAM111BQ6SJ93 734 aa9.68□□□□□ -0.86
NIPAL3-201ENST00000003912 VRK2Q86Y07 508 aa9.68□□□□□ -0.86
NIPAL3-201ENST00000003912 TM4SF18Q96CE8 201 aa9.68□□□□□ -0.86
NIPAL3-201ENST00000003912 MYEOVQ96EZ4 313 aa9.68□□□□□ -0.86
NIPAL3-201ENST00000003912 TEX101Q9BY14 249 aa9.68□□□□□ -0.86
NIPAL3-201ENST00000003912 PLA2G2FQ9BZM2 168 aa9.68□□□□□ -0.86
NIPAL3-201ENST00000003912 GORASP2Q9H8Y8 452 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms