RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Ptpn7Q8BUM3 359 aa21.07■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Ctdsp2Q8BX07 270 aa21.07■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Fbxl22Q8C7B6 236 aa21.07■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Slc16a14Q8K1C7 512 aa21.07■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Abcg5Q99PE8 652 aa21.07■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Metap1dQ9CPW9 335 aa21.07■□□□□ 0.96
Scn1b-201ENSMUST00000098548 5530401A14RikQ9D3H9 131 aa21.07■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Fabp12Q9DAK4 132 aa21.07■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Spata19Q9DAQ9 154 aa21.07■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Pbld1Q9DCG6 288 aa21.07■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Mapk11Q9WUI1 364 aa21.07■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Zfp407G3UVV3 2246 aa21.07■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Stpg3A2RSX4 306 aa21.06■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Znf382B2RXC5 579 aa21.06■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Tmed7D3YZZ5 224 aa21.06■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Zfp282E9PVC2 666 aa21.06■□□□□ 0.96
Scn1b-201ENSMUST00000098548 SvaE9PX96 165 aa21.06■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Bmp4P21275 408 aa21.06■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Ido1P28776 407 aaKnown RBP21.06■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Slc5a12Q49B93 619 aa21.06■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Ankrd37Q569N2 159 aa21.06■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Thoc6Q5U4D9 341 aa21.06■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Olfr857Q7TRF7 309 aa21.06■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Mfn2Q80U63 757 aa21.06■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Ubash3bQ8BGG7 638 aa21.06■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Tmem251Q8BH26 163 aa21.06■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Ccdc126Q8BIS8 140 aa21.06■□□□□ 0.96
Scn1b-201ENSMUST00000098548 TiparpQ8C1B2 657 aa21.06■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Atxn7l2Q8C8K6 696 aa21.06■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Olfr1047Q8VGS0 319 aa21.06■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Lims1Q99JW4 325 aa21.06■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Sntb1Q99L88 537 aaKnown RBP21.06■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Nsa2Q9CR47 260 aaKnown RBP21.06■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Q9CZV2 255 aa21.06■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Nos1apQ9D3A8 503 aa21.06■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Snx5Q9D8U8 404 aa21.06■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Jph1Q9ET80 660 aa21.06■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Ptdss2Q9Z1X2 473 aa21.06■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Gm5565A0A0G2JGB2 317 aa21.06■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Esp22A8R0V4 111 aa21.06■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Zfp563B8JJZ9 448 aa21.06■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Amd2D3Z6H8 334 aa21.06■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Gm3298E9PW80 205 aa21.06■□□□□ 0.96
Scn1b-201ENSMUST00000098548 5430401F13RikE9Q328 175 aa21.06■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Vmn1r20K7N778 303 aa21.06■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Gtpbp1O08582 668 aaKnown RBP21.06■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Hsd17b10O08756 261 aaKnown RBP21.06■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Dbil5O09035 87 aa21.06■□□□□ 0.96
Scn1b-201ENSMUST00000098548 P03976 113 aa21.06■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Amd1P0DMN7 334 aa21.06■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Slc30a1Q60738 503 aa21.06■□□□□ 0.96
Scn1b-201ENSMUST00000098548 St8sia1Q64687 355 aa21.06■□□□□ 0.96
Scn1b-201ENSMUST00000098548 WdcpQ6NV72 663 aa21.06■□□□□ 0.96
Scn1b-201ENSMUST00000098548 DmknQ6P253 517 aa21.06■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Pum2Q80U58 1066 aaKnown RBP21.06■□□□□ 0.96
Scn1b-201ENSMUST00000098548 D2hgdhQ8CIM3 535 aa21.06■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Il17rdQ8JZL1 738 aa21.06■□□□□ 0.96
Scn1b-201ENSMUST00000098548 ThtpaQ8JZL3 224 aa21.06■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Slc25a36Q922G0 311 aa21.06■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Tram2Q924Z5 370 aa21.06■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Lyrm1Q9CQB7 122 aa21.06■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Olfr938Q9EQ93 315 aa21.06■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Izumo1rQ9EQF4 244 aa21.06■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Eif3iQ9QZD9 325 aaKnown RBP21.06■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Eif2s3yQ9Z0N2 472 aa21.06■□□□□ 0.96
Scn1b-201ENSMUST00000098548 9930021J03RikH3BKP8 2027 aa21.05■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Gm4869A0A1B0GSG7 984 aa21.05■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Olfr1206A2ATJ9 307 aa21.05■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Il20rbE9Q9A6 308 aa21.05■□□□□ 0.96
Scn1b-201ENSMUST00000098548 ClppO88696 272 aa21.05■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Atp1b1P14094 304 aaKnown RBP21.05■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Acp2P24638 423 aa21.05■□□□□ 0.96
Scn1b-201ENSMUST00000098548 IapP24822 559 aa21.05■□□□□ 0.96
Scn1b-201ENSMUST00000098548 CtgfP29268 348 aa21.05■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Nsg2P47759 171 aa21.05■□□□□ 0.96
Scn1b-201ENSMUST00000098548 S100a13P97352 98 aa21.05■□□□□ 0.96
Scn1b-201ENSMUST00000098548 JupQ02257 745 aaKnown RBP21.05■□□□□ 0.96
Scn1b-201ENSMUST00000098548 FuzQ3UYI6 415 aa21.05■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Mup20Q5FW60 181 aa21.05■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Olfr684Q7TRN8 312 aa21.05■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Zar1Q80SU3 361 aa21.05■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Cpeb2Q812E0 521 aaKnown RBP21.05■□□□□ 0.96
Scn1b-201ENSMUST00000098548 MkxQ8BIA3 353 aa21.05■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Cdcp2Q8BQH6 427 aa21.05■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Fam131aQ8BWU3 361 aa21.05■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Cldn17Q8BXA6 224 aa21.05■□□□□ 0.96
Scn1b-201ENSMUST00000098548 SynpoQ8CC35 929 aaKnown RBP21.05■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Ston1Q8CDJ8 730 aa21.05■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Csnka2ipQ8CH19 720 aa21.05■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Eipr1Q8K0G5 386 aa21.05■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Sirt4Q8R216 333 aa21.05■□□□□ 0.96
Scn1b-201ENSMUST00000098548 FggQ8VCM7 436 aa21.05■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Olfr763Q8VGC1 309 aa21.05■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Olfr160Q8VGE3 309 aa21.05■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Tcf19Q99KJ5 263 aa21.05■□□□□ 0.96
Scn1b-201ENSMUST00000098548 HrgQ9ESB3 525 aa21.05■□□□□ 0.96
Scn1b-201ENSMUST00000098548 ChmlQ9QZD5 621 aa21.05■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Ppp1r17Q9Z2E4 159 aa21.05■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Vmn1r77E9PY60 306 aa21.04■□□□□ 0.96
Scn1b-201ENSMUST00000098548 Aff2O55112 1272 aa21.04■□□□□ 0.96
Retrieved 100 of 22,080 RNA–protein pairs in 21.8 ms