RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 Vmn1r16K7N775 303 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Cd8aP01731 247 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Cdk1P11440 297 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 RptnP97347 1118 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Krba1Q6NXZ1 1043 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Timd4Q6U7R4 343 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 McubQ810S1 345 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Coro2bQ8BH44 480 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Wdr48Q8BH57 676 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Defb35Q8R2I3 63 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Slc9a8Q8R4D1 576 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 SgtbQ8VD33 304 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Pdcd10Q8VE70 212 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Olfr617Q8VGA1 318 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Lactb2Q99KR3 288 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Nkx2-4Q9EQM3 354 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Arr3Q9EQP6 381 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Fbxo8Q9QZN3 319 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Cdh20Q9Z0M3 801 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Gm17949A0A1B0GRV7 212 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Amd2D3Z6H8 334 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Gm8127E9Q0P0 100 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Enthd1E9Q1Z2 618 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 5430401F13RikE9Q328 175 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 2610001J05RikF2Z3Y9 59 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Gm8094K7N6U8 211 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Ccrl2O35457 360 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Clk4O35493 481 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Amd1P0DMN7 334 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Atp1b1P14094 304 aaKnown RBP7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Prph2P15499 346 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Adrb1P34971 466 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Wdr75Q3U821 830 aaKnown RBP7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Gm813Q3UWK9 176 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Tm9sf4Q8BH24 643 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Kcnmb1Q8CAE3 191 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Mrpl48Q8JZS9 211 aaKnown RBP7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Dlgap5Q8K4R9 808 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Olfr164Q8VF87 315 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Oas3Q8VI93 1138 aaKnown RBP7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 9230112D13RikQ9D260 137 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Znf207Q9JMD0 495 aaKnown RBP7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Slco1a1Q9QXZ6 670 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Acox1Q9R0H0 661 aaKnown RBP7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 PtgfrnQ9WV91 879 aa7.97□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Slc25a34A2ADF7 318 aa7.96□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Skint8A7XV07 398 aa7.96□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Olfr59B1ARL3 323 aa7.96□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 SrsxB2RZI1 361 aa7.96□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Fbxw15L7N1X6 466 aa7.96□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Efna3O08545 230 aa7.96□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 H2-D1P14427 368 aa7.96□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Mmp12P34960 473 aa7.96□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Ccdc69Q3TCJ8 202 aa7.96□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Timm8a2Q4FZG7 97 aa7.96□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 HlxQ61670 476 aa7.96□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Ppp3r1Q63810 170 aa7.96□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Atg4bQ8BGE6 393 aa7.96□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Enpp6Q8BGN3 440 aa7.96□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Trim23Q8BGX0 574 aa7.96□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Zbtb20Q8K0L9 741 aa7.96□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Tssk6Q925K9 273 aa7.96□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Hrasls5Q9CPX5 270 aa7.96□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Phf6Q9D4J7 364 aa7.96□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Slc7a5Q9Z127 512 aa7.96□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Vmn1r90A0A087WR36 309 aa7.96□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Olfr1366A0A1W2P740 328 aa7.96□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 SvaE9PX96 165 aa7.96□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Vmn2r29L7N2D4 852 aa7.96□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Gm8050L7N2E3 205 aa7.96□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Pcsk2P21661 637 aa7.96□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Cbx3P23198 183 aaKnown RBP7.96□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Fpr1P33766 364 aa7.96□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Pcbp3P57722 371 aaKnown RBP7.96□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 1700066B19RikQ3TS39 127 aa7.96□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 DmknQ6P253 517 aa7.96□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Adgrg7Q8BM96 785 aa7.96□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Mettl6Q8BVH9 282 aa7.96□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Shisa7Q8C3Q5 558 aa7.96□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 CenpxQ8C4X1 78 aa7.96□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Vsx1Q91V10 363 aa7.96□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 NaxdQ9CZ42 343 aa7.96□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 EqtnQ9D9V2 337 aa7.96□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Tnfrsf21Q9EPU5 655 aa7.96□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Dclk1Q9JLM8 756 aa7.96□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 HgfacQ9R098 653 aa7.96□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Nup205A0A0J9YUD5 2061 aaKnown RBP7.96□□□□□ -1.13
Sf3b1-201ENSMUST00000027127 Olfr1555-ps1A0A140LHT7 321 aa7.96□□□□□ -1.14
Sf3b1-201ENSMUST00000027127 Zfp282E9PVC2 666 aa7.96□□□□□ -1.14
Sf3b1-201ENSMUST00000027127 FxnO35943 207 aa7.96□□□□□ -1.14
Sf3b1-201ENSMUST00000027127 Rad51dO55230 329 aa7.96□□□□□ -1.14
Sf3b1-201ENSMUST00000027127 Rab2aP53994 212 aa7.96□□□□□ -1.14
Sf3b1-201ENSMUST00000027127 Kcnk2P97438 426 aa7.96□□□□□ -1.14
Sf3b1-201ENSMUST00000027127 P2rx3Q3UR32 397 aa7.96□□□□□ -1.14
Sf3b1-201ENSMUST00000027127 Frg2f1Q6P3A2 227 aa7.96□□□□□ -1.14
Sf3b1-201ENSMUST00000027127 CebpeQ6PZD9 281 aa7.96□□□□□ -1.14
Sf3b1-201ENSMUST00000027127 Olfr835Q7TRG7 311 aa7.96□□□□□ -1.14
Sf3b1-201ENSMUST00000027127 9130023H24RikQ8BG98 337 aa7.96□□□□□ -1.14
Sf3b1-201ENSMUST00000027127 Endod1Q8C522 501 aa7.96□□□□□ -1.14
Sf3b1-201ENSMUST00000027127 Olfr61Q8VGM2 311 aa7.96□□□□□ -1.14
Retrieved 100 of 22,080 RNA–protein pairs in 36.9 ms