RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 COL19A1Q14993 1142 aa12.9□□□□□ -0.34
PHGDH-233ENST00000642021 SUZ12Q15022 739 aaKnown RBP12.9□□□□□ -0.34
PHGDH-233ENST00000642021 IDNKQ5T6J7 187 aa12.9□□□□□ -0.34
PHGDH-233ENST00000642021 LAMTOR1Q6IAA8 161 aa12.9□□□□□ -0.34
PHGDH-233ENST00000642021 PLBD1Q6P4A8 553 aa12.9□□□□□ -0.34
PHGDH-233ENST00000642021 FRRS1Q6ZNA5 592 aa12.9□□□□□ -0.34
PHGDH-233ENST00000642021 MBOAT2Q6ZWT7 520 aa12.9□□□□□ -0.34
PHGDH-233ENST00000642021 LIX1LQ8IVB5 337 aa12.9□□□□□ -0.34
PHGDH-233ENST00000642021 KCT2Q8NC54 265 aa12.9□□□□□ -0.34
PHGDH-233ENST00000642021 OR52N1Q8NH53 320 aa12.9□□□□□ -0.34
PHGDH-233ENST00000642021 SUSD6Q92537 303 aa12.9□□□□□ -0.34
PHGDH-233ENST00000642021 COL26A1Q96A83 441 aa12.9□□□□□ -0.34
PHGDH-233ENST00000642021 ARSGQ96EG1 525 aa12.9□□□□□ -0.34
PHGDH-233ENST00000642021 TEX101Q9BY14 249 aa12.9□□□□□ -0.34
PHGDH-233ENST00000642021 CXXC1Q9P0U4 656 aaPredicted RBP12.9□□□□□ -0.34
PHGDH-233ENST00000642021 SLC7A7Q9UM01 511 aa12.9□□□□□ -0.34
PHGDH-233ENST00000642021 ZFR2Q9UPR6 939 aaKnown RBP12.9□□□□□ -0.34
PHGDH-233ENST00000642021 PTPRSQ13332 1948 aa12.89□□□□□ -0.35
PHGDH-233ENST00000642021 C12orf71A8MTZ7 269 aa12.89□□□□□ -0.35
PHGDH-233ENST00000642021 MID1O15344 667 aa12.89□□□□□ -0.35
PHGDH-233ENST00000642021 PKLRP30613 574 aa12.89□□□□□ -0.35
PHGDH-233ENST00000642021 GCGRP47871 477 aa12.89□□□□□ -0.35
PHGDH-233ENST00000642021 PRMT2P55345 433 aa12.89□□□□□ -0.35
PHGDH-233ENST00000642021 ZNF57Q68EA5 555 aaPredicted RBP12.89□□□□□ -0.35
PHGDH-233ENST00000642021 SHISA5Q8N114 240 aa12.89□□□□□ -0.35
PHGDH-233ENST00000642021 TTLQ8NG68 377 aa12.89□□□□□ -0.35
PHGDH-233ENST00000642021 OR2T33Q8NG76 320 aa12.89□□□□□ -0.35
PHGDH-233ENST00000642021 OR2L3Q8NG85 312 aa12.89□□□□□ -0.35
PHGDH-233ENST00000642021 OR7G2Q8NG99 324 aa12.89□□□□□ -0.35
PHGDH-233ENST00000642021 CDS1Q92903 461 aa12.89□□□□□ -0.35
PHGDH-233ENST00000642021 CHFRQ96EP1 664 aa12.89□□□□□ -0.35
PHGDH-233ENST00000642021 COQ7Q99807 217 aa12.89□□□□□ -0.35
PHGDH-233ENST00000642021 TRIM45Q9H8W5 580 aaPredicted RBP12.89□□□□□ -0.35
PHGDH-233ENST00000642021 ASB6Q9NWX5 421 aa12.89□□□□□ -0.35
PHGDH-233ENST00000642021 PTGFRNQ9P2B2 879 aa12.89□□□□□ -0.35
PHGDH-233ENST00000642021 EXTL2Q9UBQ6 330 aa12.89□□□□□ -0.35
PHGDH-233ENST00000642021 POLHQ9Y253 713 aa12.89□□□□□ -0.35
PHGDH-233ENST00000642021 SGK494L7N484 410 aa12.89□□□□□ -0.35
PHGDH-233ENST00000642021 RNF13O43567 381 aa12.89□□□□□ -0.35
PHGDH-233ENST00000642021 GAAP10253 952 aa12.89□□□□□ -0.35
PHGDH-233ENST00000642021 SHC1P29353 583 aa12.89□□□□□ -0.35
PHGDH-233ENST00000642021 PRKAR1BP31321 381 aa12.89□□□□□ -0.35
PHGDH-233ENST00000642021 CTNNB1P35222 781 aa12.89□□□□□ -0.35
PHGDH-233ENST00000642021 HTR2BP41595 481 aa12.89□□□□□ -0.35
PHGDH-233ENST00000642021 ERVK-21P61565 698 aa12.89□□□□□ -0.35
PHGDH-233ENST00000642021 SF3A2Q15428 464 aaKnown RBP12.89□□□□□ -0.35
PHGDH-233ENST00000642021 C1orf53Q5VUE5 145 aa12.89□□□□□ -0.35
PHGDH-233ENST00000642021 SMARCD3Q6STE5 483 aa12.89□□□□□ -0.35
PHGDH-233ENST00000642021 ASB18Q6ZVZ8 466 aa12.89□□□□□ -0.35
PHGDH-233ENST00000642021 REM2Q8IYK8 340 aaPredicted RBP12.89□□□□□ -0.35
PHGDH-233ENST00000642021 TMEM99Q8N816 258 aa12.89□□□□□ -0.35
PHGDH-233ENST00000642021 OR7G1Q8NGA0 311 aa12.89□□□□□ -0.35
PHGDH-233ENST00000642021 OR2L8Q8NGY9 312 aa12.89□□□□□ -0.35
PHGDH-233ENST00000642021 ADAMTS15Q8TE58 950 aa12.89□□□□□ -0.35
PHGDH-233ENST00000642021 DEDD2Q8WXF8 326 aa12.89□□□□□ -0.35
PHGDH-233ENST00000642021 WDR26Q9H7D7 661 aa12.89□□□□□ -0.35
PHGDH-233ENST00000642021 SCN3AQ9NY46 2000 aa12.89□□□□□ -0.35
PHGDH-233ENST00000642021 H2AFY2Q9P0M6 372 aaPredicted RBP12.89□□□□□ -0.35
PHGDH-233ENST00000642021 C1QTNF3-AMACRE9PGA6 284 aa12.88□□□□□ -0.35
PHGDH-233ENST00000642021 E9PI62 339 aa12.88□□□□□ -0.35
PHGDH-233ENST00000642021 CHST10O43529 356 aa12.88□□□□□ -0.35
PHGDH-233ENST00000642021 EFCAB14O75071 495 aa12.88□□□□□ -0.35
PHGDH-233ENST00000642021 DNAJB6O75190 326 aa12.88□□□□□ -0.35
PHGDH-233ENST00000642021 C1QBP02746 253 aa12.88□□□□□ -0.35
PHGDH-233ENST00000642021 PRG2P13727 222 aa12.88□□□□□ -0.35
PHGDH-233ENST00000642021 NDUFV2P19404 249 aa12.88□□□□□ -0.35
PHGDH-233ENST00000642021 SOX9P48436 509 aa12.88□□□□□ -0.35
PHGDH-233ENST00000642021 BTN3A2P78410 334 aa12.88□□□□□ -0.35
PHGDH-233ENST00000642021 IRF4Q15306 451 aa12.88□□□□□ -0.35
PHGDH-233ENST00000642021 CCNJQ5T5M9 372 aa12.88□□□□□ -0.35
PHGDH-233ENST00000642021 AGBL4Q5VU57 503 aa12.88□□□□□ -0.35
PHGDH-233ENST00000642021 TIGD3Q6B0B8 471 aa12.88□□□□□ -0.35
PHGDH-233ENST00000642021 WDR88Q6ZMY6 472 aa12.88□□□□□ -0.35
PHGDH-233ENST00000642021 CXXC5Q7LFL8 322 aaKnown RBP12.88□□□□□ -0.35
PHGDH-233ENST00000642021 OR4N5Q8IXE1 308 aa12.88□□□□□ -0.35
PHGDH-233ENST00000642021 RAB42Q8N4Z0 105 aa12.88□□□□□ -0.35
PHGDH-233ENST00000642021 OR4M1Q8NGD0 313 aa12.88□□□□□ -0.35
PHGDH-233ENST00000642021 GANCQ8TET4 914 aa12.88□□□□□ -0.35
PHGDH-233ENST00000642021 SMAP2Q8WU79 429 aaPredicted RBP12.88□□□□□ -0.35
PHGDH-233ENST00000642021 MOAP1Q96BY2 351 aa12.88□□□□□ -0.35
PHGDH-233ENST00000642021 GON7Q9BXV9 100 aa12.88□□□□□ -0.35
PHGDH-233ENST00000642021 ACTRT3Q9BYD9 372 aa12.88□□□□□ -0.35
PHGDH-233ENST00000642021 DPH1Q9BZG8 443 aa12.88□□□□□ -0.35
PHGDH-233ENST00000642021 ANKRD19PQ9H560 264 aa12.88□□□□□ -0.35
PHGDH-233ENST00000642021 C20orf141Q9NUB4 165 aa12.88□□□□□ -0.35
PHGDH-233ENST00000642021 GSAPA4D1B5 854 aa12.88□□□□□ -0.35
PHGDH-233ENST00000642021 INMT-MINDY4F8WBC2 141 aa12.88□□□□□ -0.35
PHGDH-233ENST00000642021 SLC43A1O75387 559 aa12.88□□□□□ -0.35
PHGDH-233ENST00000642021 ASGR2P07307 311 aa12.88□□□□□ -0.35
PHGDH-233ENST00000642021 RRAS2P62070 204 aaPredicted RBP12.88□□□□□ -0.35
PHGDH-233ENST00000642021 TNK1Q13470 666 aa12.88□□□□□ -0.35
PHGDH-233ENST00000642021 GPR176Q14439 515 aa12.88□□□□□ -0.35
PHGDH-233ENST00000642021 KRT33BQ14525 404 aa12.88□□□□□ -0.35
PHGDH-233ENST00000642021 TCEA2Q15560 299 aa12.88□□□□□ -0.35
PHGDH-233ENST00000642021 CEBPEQ15744 281 aa12.88□□□□□ -0.35
PHGDH-233ENST00000642021 FAM78AQ5JUQ0 283 aa12.88□□□□□ -0.35
PHGDH-233ENST00000642021 MZT2AQ6P582 158 aa12.88□□□□□ -0.35
PHGDH-233ENST00000642021 DNAJC5GQ8N7S2 189 aa12.88□□□□□ -0.35
PHGDH-233ENST00000642021 GRPEL2Q8TAA5 225 aa12.88□□□□□ -0.35
PHGDH-233ENST00000642021 SNAPC3Q92966 411 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms