RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 FXNQ16595 210 aa8.64□□□□□ -1.03
PHGDH-228ENST00000641847 ARHGAP11BQ3KRB8 267 aa8.64□□□□□ -1.03
PHGDH-228ENST00000641847 CCNJQ5T5M9 372 aa8.64□□□□□ -1.03
PHGDH-228ENST00000641847 AGAP7PQ5VUJ5 663 aa8.64□□□□□ -1.03
PHGDH-228ENST00000641847 OLIG3Q7RTU3 272 aa8.64□□□□□ -1.03
PHGDH-228ENST00000641847 GALNT10Q86SR1 603 aa8.64□□□□□ -1.03
PHGDH-228ENST00000641847 PRR22Q8IZ63 422 aa8.64□□□□□ -1.03
PHGDH-228ENST00000641847 TAGAPQ8N103 731 aa8.64□□□□□ -1.03
PHGDH-228ENST00000641847 METTL25Q8N6Q8 603 aa8.64□□□□□ -1.03
PHGDH-228ENST00000641847 CHDHQ8NE62 594 aaPredicted RBP8.64□□□□□ -1.03
PHGDH-228ENST00000641847 HIPK4Q8NE63 616 aa8.64□□□□□ -1.03
PHGDH-228ENST00000641847 C17orf47Q8NEP4 570 aa8.64□□□□□ -1.03
PHGDH-228ENST00000641847 OR4N2Q8NGD1 307 aa8.64□□□□□ -1.03
PHGDH-228ENST00000641847 BBS10Q8TAM1 723 aa8.64□□□□□ -1.03
PHGDH-228ENST00000641847 FAM162AQ96A26 154 aa8.64□□□□□ -1.03
PHGDH-228ENST00000641847 C14orf79Q96F83 325 aa8.64□□□□□ -1.03
PHGDH-228ENST00000641847 AGAP4Q96P64 663 aa8.64□□□□□ -1.03
PHGDH-228ENST00000641847 LMF1Q96S06 567 aa8.64□□□□□ -1.03
PHGDH-228ENST00000641847 TRIM15Q9C019 465 aa8.64□□□□□ -1.03
PHGDH-228ENST00000641847 MUC13Q9H3R2 512 aa8.64□□□□□ -1.03
PHGDH-228ENST00000641847 LIN28AQ9H9Z2 209 aaKnown RBP8.64□□□□□ -1.03
PHGDH-228ENST00000641847 CALML5Q9NZT1 146 aa8.64□□□□□ -1.03
PHGDH-228ENST00000641847 MAGEL2Q9UJ55 1249 aa8.64□□□□□ -1.03
PHGDH-228ENST00000641847 CBLCQ9ULV8 474 aa8.64□□□□□ -1.03
PHGDH-228ENST00000641847 POMPQ9Y244 141 aa8.64□□□□□ -1.03
PHGDH-228ENST00000641847 TMEM200CA6NKL6 621 aa8.63□□□□□ -1.03
PHGDH-228ENST00000641847 A8MUI8 341 aa8.63□□□□□ -1.03
PHGDH-228ENST00000641847 WWP2O00308 870 aa8.63□□□□□ -1.03
PHGDH-228ENST00000641847 TO15178 435 aa8.63□□□□□ -1.03
PHGDH-228ENST00000641847 KIAA0513O60268 411 aa8.63□□□□□ -1.03
PHGDH-228ENST00000641847 GMNNO75496 209 aa8.63□□□□□ -1.03
PHGDH-228ENST00000641847 SOX30O94993 753 aa8.63□□□□□ -1.03
PHGDH-228ENST00000641847 KCNK2O95069 426 aa8.63□□□□□ -1.03
PHGDH-228ENST00000641847 H6PDO95479 791 aa8.63□□□□□ -1.03
PHGDH-228ENST00000641847 KRT20P35900 424 aa8.63□□□□□ -1.03
PHGDH-228ENST00000641847 PIGAP37287 484 aa8.63□□□□□ -1.03
PHGDH-228ENST00000641847 CRISP3P54108 245 aa8.63□□□□□ -1.03
PHGDH-228ENST00000641847 NRG3P56975 720 aa8.63□□□□□ -1.03
PHGDH-228ENST00000641847 SOX8P57073 446 aa8.63□□□□□ -1.03
PHGDH-228ENST00000641847 PCBP3P57721 371 aaKnown RBP8.63□□□□□ -1.03
PHGDH-228ENST00000641847 PSPHP78330 225 aa8.63□□□□□ -1.03
PHGDH-228ENST00000641847 MS4A2Q01362 244 aa8.63□□□□□ -1.03
PHGDH-228ENST00000641847 TLE4Q04727 773 aa8.63□□□□□ -1.03
PHGDH-228ENST00000641847 CHRNEQ04844 493 aa8.63□□□□□ -1.03
PHGDH-228ENST00000641847 RBPJQ06330 500 aa8.63□□□□□ -1.03
PHGDH-228ENST00000641847 VEZF1Q14119 521 aa8.63□□□□□ -1.03
PHGDH-228ENST00000641847 FLOT2Q14254 428 aa8.63□□□□□ -1.03
PHGDH-228ENST00000641847 TRIM25Q14258 630 aaKnown RBP8.63□□□□□ -1.03
PHGDH-228ENST00000641847 DECR1Q16698 335 aa8.63□□□□□ -1.03
PHGDH-228ENST00000641847 LRRC23Q53EV4 343 aaPredicted RBP8.63□□□□□ -1.03
PHGDH-228ENST00000641847 INTS11Q5TA45 600 aaKnown RBP8.63□□□□□ -1.03
PHGDH-228ENST00000641847 C1orf146Q5VVC0 180 aa8.63□□□□□ -1.03
PHGDH-228ENST00000641847 PRAMEF8Q5VWM4 474 aa8.63□□□□□ -1.03
PHGDH-228ENST00000641847 PRAMEF7Q5VXH5 474 aa8.63□□□□□ -1.03
PHGDH-228ENST00000641847 FCRLBQ6BAA4 426 aa8.63□□□□□ -1.03
PHGDH-228ENST00000641847 TYW3Q6IPR3 259 aaKnown RBP8.63□□□□□ -1.03
PHGDH-228ENST00000641847 LCN8Q6JVE9 175 aa8.63□□□□□ -1.03
PHGDH-228ENST00000641847 REEP3Q6NUK4 255 aa8.63□□□□□ -1.03
PHGDH-228ENST00000641847 CYP2R1Q6VVX0 501 aa8.63□□□□□ -1.03
PHGDH-228ENST00000641847 C16orf47Q6ZP98 133 aaPredicted RBP8.63□□□□□ -1.03
PHGDH-228ENST00000641847 LRRC74BQ6ZQY2 392 aa8.63□□□□□ -1.03
PHGDH-228ENST00000641847 ZNF295-AS1Q8N0V1 137 aa8.63□□□□□ -1.03
PHGDH-228ENST00000641847 SLC5A8Q8N695 610 aa8.63□□□□□ -1.03
PHGDH-228ENST00000641847 FAM13CQ8NE31 585 aa8.63□□□□□ -1.03
PHGDH-228ENST00000641847 SLC22A8Q8TCC7 542 aa8.63□□□□□ -1.03
PHGDH-228ENST00000641847 BRIX1Q8TDN6 353 aaKnown RBP8.63□□□□□ -1.03
PHGDH-228ENST00000641847 TMBIM1Q969X1 311 aa8.63□□□□□ -1.03
PHGDH-228ENST00000641847 TP53INP1Q96A56 240 aa8.63□□□□□ -1.03
PHGDH-228ENST00000641847 EFHD2Q96C19 240 aaPredicted RBP8.63□□□□□ -1.03
PHGDH-228ENST00000641847 HSPBAP1Q96EW2 488 aa8.63□□□□□ -1.03
PHGDH-228ENST00000641847 CCDC120Q96HB5 630 aa8.63□□□□□ -1.03
PHGDH-228ENST00000641847 THOC3Q96J01 351 aaKnown RBP8.63□□□□□ -1.03
PHGDH-228ENST00000641847 TRNT1Q96Q11 434 aaKnown RBP8.63□□□□□ -1.03
PHGDH-228ENST00000641847 TREX2Q9BQ50 279 aaPredicted RBP8.63□□□□□ -1.03
PHGDH-228ENST00000641847 SLX1AQ9BQ83 275 aa8.63□□□□□ -1.03
PHGDH-228ENST00000641847 ZNF350Q9GZX5 532 aa8.63□□□□□ -1.03
PHGDH-228ENST00000641847 MCCC2Q9HCC0 563 aa8.63□□□□□ -1.03
PHGDH-228ENST00000641847 ACTR3BQ9P1U1 418 aa8.63□□□□□ -1.03
PHGDH-228ENST00000641847 MYOTQ9UBF9 498 aa8.63□□□□□ -1.03
PHGDH-228ENST00000641847 DSPPQ9NZW4 1301 aa8.62□□□□□ -1.03
PHGDH-228ENST00000641847 NPIPA5A0A0B4J1W7 369 aa8.62□□□□□ -1.03
PHGDH-228ENST00000641847 FAM221AA4D161 298 aa8.62□□□□□ -1.03
PHGDH-228ENST00000641847 NPIPA7E9PJI5 369 aa8.62□□□□□ -1.03
PHGDH-228ENST00000641847 ACOT8O14734 319 aa8.62□□□□□ -1.03
PHGDH-228ENST00000641847 MAN1A2O60476 641 aa8.62□□□□□ -1.03
PHGDH-228ENST00000641847 STX11O75558 287 aa8.62□□□□□ -1.03
PHGDH-228ENST00000641847 OR2J2O76002 312 aa8.62□□□□□ -1.03
PHGDH-228ENST00000641847 PDE9AO76083 593 aa8.62□□□□□ -1.03
PHGDH-228ENST00000641847 PGM3O95394 542 aa8.62□□□□□ -1.03
PHGDH-228ENST00000641847 IL33O95760 270 aa8.62□□□□□ -1.03
PHGDH-228ENST00000641847 SERPINA1P01009 418 aa8.62□□□□□ -1.03
PHGDH-228ENST00000641847 IGKV1D-16P01601 117 aa8.62□□□□□ -1.03
PHGDH-228ENST00000641847 OPN1SWP03999 348 aa8.62□□□□□ -1.03
PHGDH-228ENST00000641847 NPIPA8P0DM63 369 aa8.62□□□□□ -1.03
PHGDH-228ENST00000641847 AGAP20933 346 aa8.62□□□□□ -1.03
PHGDH-228ENST00000641847 ATP6V1C1P21283 382 aa8.62□□□□□ -1.03
PHGDH-228ENST00000641847 ABCD3P28288 659 aa8.62□□□□□ -1.03
PHGDH-228ENST00000641847 IL12BP29460 328 aa8.62□□□□□ -1.03
PHGDH-228ENST00000641847 ART1P52961 327 aa8.62□□□□□ -1.03
PHGDH-228ENST00000641847 PSMD4P55036 377 aaKnown RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms