RNA–Protein interactions for RNA: ENST00000641523.1

CASC19-238, Transcript of cancer susceptibility 19, human

BASIC

Gene CASC19, Length 1,558 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-238	ENST00000641523	HTR3E	A5X5Y0	456 aa		5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	OR6C68	A6NDL8	312 aa		5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	CXorf65	A6NEN9	183 aa		5.8	□□□□□ -1.48
CASC19-238	ENST00000641523		K7EM74	188 aa		5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	IFNL4	K9M1U5	179 aa		5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	PSIP1	O75475	530 aa	Known RBP	5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	TTC4	O95801	387 aa		5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	GBA	P04062	536 aa		5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	MPC1L	P0DKB6	136 aa		5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	ERG	P11308	486 aa		5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	GP1BB	P13224	206 aa		5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	EZR	P15311	586 aa	Known RBP	5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	EPOR	P19235	508 aa		5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	ITGA3	P26006	1051 aa		5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	SOX6	P35712	828 aa		5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	BDKRB1	P46663	353 aa		5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	RGS4	P49798	205 aa		5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	PNLIPRP2	P54317	469 aa		5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	VSX2	P58304	361 aa	Predicted RBP	5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	PMP22	Q01453	160 aa		5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	INPP5J	Q15735	1006 aa	Predicted RBP	5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	NADK2	Q4G0N4	442 aa		5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	CTSL3P	Q5NE16	218 aa		5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	WASHC2D	Q5SRD0	308 aa		5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	AGAP7P	Q5VUJ5	663 aa		5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	SHE	Q5VZ18	495 aa		5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	CCDC137	Q6PK04	289 aa	Known RBP	5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	PRUNE1	Q86TP1	453 aa		5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	KLB	Q86Z14	1044 aa		5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	UEVLD	Q8IX04	471 aa		5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	RASGEF1C	Q8N431	466 aa		5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	PAQR4	Q8N4S7	273 aa	Predicted RBP	5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	PNLDC1	Q8NA58	520 aa	Known RBP	5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	PSMA8	Q8TAA3	256 aa		5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	AGR3	Q8TD06	166 aa		5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	AGAP4	Q96P64	663 aa		5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	DPH7	Q9BTV6	452 aa		5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	PCBD2	Q9H0N5	130 aa		5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	HRH4	Q9H3N8	390 aa		5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	ZNF304	Q9HCX3	659 aa		5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	MRPS30	Q9NP92	439 aa	Known RBP	5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	AGPAT4	Q9NRZ5	378 aa		5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	GLRX2	Q9NS18	164 aa		5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	ZNF282	Q9UDV7	671 aa	Predicted RBP	5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	LEF1	Q9UJU2	399 aa	Predicted RBP	5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	FBXL4	Q9UKA2	621 aa		5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	PACSIN3	Q9UKS6	424 aa		5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	DHDH	Q9UQ10	334 aa		5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	MAD1L1	Q9Y6D9	718 aa		5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	SVIL	O95425	2214 aa		5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	FAM90A8P	A6NJQ4	464 aa		5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	ARHGEF33	A8MVX0	844 aa		5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	KDM4E	B2RXH2	506 aa	Predicted RBP	5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	MAP2K7	O14733	419 aa		5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	NIPSNAP2	O75323	286 aa		5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	AVIL	O75366	819 aa		5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	UMOD	P07911	640 aa		5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	ANXA5	P08758	320 aa		5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	FAM58BP	P0C7Q3	252 aa		5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	FAM90A13P	P0C7W8	464 aa		5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	FAM90A24P	P0C7X0	464 aa		5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	PGAM1	P18669	254 aa		5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	FBL	P22087	321 aa	Known RBP	5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	AHCY	P23526	432 aa		5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	CXCR2	P25025	360 aa		5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	COIL	P38432	576 aa	Predicted RBP	5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	CAMP	P49913	170 aa		5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	CCZ1B	P86790	482 aa		5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	CCZ1	P86791	482 aa	Predicted RBP	5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	PRDX1	Q06830	199 aa	Known RBP	5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	ILF2	Q12905	390 aa	Known RBP	5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	NDUFA9	Q16795	377 aa		5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	KLHL38	Q2WGJ6	581 aa		5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	HMBOX1	Q6NT76	420 aa		5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	ELMOD2	Q8IZ81	293 aa		5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	C2orf73	Q8N5S3	287 aa	Predicted RBP	5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	DNAAF1	Q8NEP3	725 aa		5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	OR2A1	Q8NGT9	310 aa		5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	MCOLN3	Q8TDD5	553 aa		5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	ACTRT1	Q8TDG2	376 aa		5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	PPP4R1	Q8TF05	950 aa		5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	INPP5D	Q92835	1189 aa		5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	SPACA9	Q96E40	222 aa	Predicted RBP	5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	MMAB	Q96EY8	250 aa	Predicted RBP	5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	SERPINB12	Q96P63	405 aa		5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	NRTN	Q99748	197 aa		5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	WDR77	Q9BQA1	342 aa	Predicted RBP	5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	DUSP26	Q9BV47	211 aa		5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	LHPP	Q9H008	270 aa		5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	TCF7L2	Q9NQB0	619 aa		5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	C20orf96	Q9NUD7	363 aa	Predicted RBP	5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	N6AMT1	Q9Y5N5	214 aa		5.8	□□□□□ -1.48
CASC19-238	ENST00000641523	FER1L5	A0AVI2	2057 aa		5.79	□□□□□ -1.48
CASC19-238	ENST00000641523	SNRNP200	O75643	2136 aa	Known RBP	5.79	□□□□□ -1.48
CASC19-238	ENST00000641523	DIDO1	Q9BTC0	2240 aa	Known RBP	5.79	□□□□□ -1.48
CASC19-238	ENST00000641523	IGLV3-12	A0A075B6K2	115 aa		5.79	□□□□□ -1.48
CASC19-238	ENST00000641523		A0A0J9YVX5	310 aa		5.79	□□□□□ -1.48
CASC19-238	ENST00000641523	VSTM2B	A6NLU5	285 aa		5.79	□□□□□ -1.48
CASC19-238	ENST00000641523	ANXA2P2	A6NMY6	339 aa		5.79	□□□□□ -1.48
CASC19-238	ENST00000641523	HCRTR1	O43613	425 aa		5.79	□□□□□ -1.48

Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms