RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 A0A1B0GTL3 188 aa16.49■□□□□ 0.23
SCARB2-223ENST00000640640 A8MVJ9 347 aa16.49■□□□□ 0.23
SCARB2-223ENST00000640640 H3BNC9 293 aa16.49■□□□□ 0.23
SCARB2-223ENST00000640640 PLPP1O14494 284 aa16.49■□□□□ 0.23
SCARB2-223ENST00000640640 ZNF208O43345 1280 aa16.49■□□□□ 0.23
SCARB2-223ENST00000640640 KDM4BO94953 1096 aa16.49■□□□□ 0.23
SCARB2-223ENST00000640640 GASTP01350 101 aa16.49■□□□□ 0.23
SCARB2-223ENST00000640640 EIF2DP41214 584 aaKnown RBP16.49■□□□□ 0.23
SCARB2-223ENST00000640640 SGCAQ16586 387 aa16.49■□□□□ 0.23
SCARB2-223ENST00000640640 CD300LGQ6UXG3 332 aa16.49■□□□□ 0.23
SCARB2-223ENST00000640640 OR8H3Q8N146 312 aa16.49■□□□□ 0.23
SCARB2-223ENST00000640640 OR1F2PQ96R84 312 aa16.49■□□□□ 0.23
SCARB2-223ENST00000640640 STRADBQ9C0K7 418 aa16.49■□□□□ 0.23
SCARB2-223ENST00000640640 GMEB1Q9Y692 573 aa16.49■□□□□ 0.23
SCARB2-223ENST00000640640 OR14I1A6ND48 311 aa16.49■□□□□ 0.23
SCARB2-223ENST00000640640 SNTB2Q13425 540 aaKnown RBP16.49■□□□□ 0.23
SCARB2-223ENST00000640640 ALG10Q5BKT4 473 aa16.49■□□□□ 0.23
SCARB2-223ENST00000640640 CCSAPQ6IQ19 270 aaPredicted RBP16.49■□□□□ 0.23
SCARB2-223ENST00000640640 ADOQ96SZ5 270 aa16.49■□□□□ 0.23
SCARB2-223ENST00000640640 C1QTNF2Q9BXJ5 285 aa16.49■□□□□ 0.23
SCARB2-223ENST00000640640 SLC6A17Q9H1V8 727 aa16.49■□□□□ 0.23
SCARB2-223ENST00000640640 GPN2Q9H9Y4 310 aaPredicted RBP16.49■□□□□ 0.23
SCARB2-223ENST00000640640 MBNL1Q9NR56 388 aaKnown RBP16.49■□□□□ 0.23
SCARB2-223ENST00000640640 SCP2D1Q9UJQ7 156 aa16.49■□□□□ 0.23
SCARB2-223ENST00000640640 FXYD1O00168 92 aa16.48■□□□□ 0.23
SCARB2-223ENST00000640640 SRPX2O60687 465 aaPredicted RBP16.48■□□□□ 0.23
SCARB2-223ENST00000640640 PNMTP11086 282 aa16.48■□□□□ 0.23
SCARB2-223ENST00000640640 RIDAP52758 137 aaKnown RBP16.48■□□□□ 0.23
SCARB2-223ENST00000640640 TNFRSF17Q02223 184 aa16.48■□□□□ 0.23
SCARB2-223ENST00000640640 PARM1Q6UWI2 310 aa16.48■□□□□ 0.23
SCARB2-223ENST00000640640 TMEM184AQ6ZMB5 413 aa16.48■□□□□ 0.23
SCARB2-223ENST00000640640 ZER1Q7Z7L7 766 aa16.48■□□□□ 0.23
SCARB2-223ENST00000640640 TBC1D20Q96BZ9 403 aa16.48■□□□□ 0.23
SCARB2-223ENST00000640640 MRPL38Q96DV4 380 aaKnown RBP16.48■□□□□ 0.23
SCARB2-223ENST00000640640 DDX31Q9H8H2 851 aaKnown RBP16.48■□□□□ 0.23
SCARB2-223ENST00000640640 FGF22Q9HCT0 170 aa16.48■□□□□ 0.23
SCARB2-223ENST00000640640 ZNF443Q9Y2A4 671 aaPredicted RBP16.48■□□□□ 0.23
SCARB2-223ENST00000640640 PADI2Q9Y2J8 665 aa16.48■□□□□ 0.23
SCARB2-223ENST00000640640 LY75O60449 1722 aa16.48■□□□□ 0.23
SCARB2-223ENST00000640640 FAM171A2A8MVW0 826 aa16.48■□□□□ 0.23
SCARB2-223ENST00000640640 NPIPA2E9PIF3 369 aa16.48■□□□□ 0.23
SCARB2-223ENST00000640640 NPIPA3F8WFD2 350 aa16.48■□□□□ 0.23
SCARB2-223ENST00000640640 BOLA2-SMG1P6H3BVE0 249 aa16.48■□□□□ 0.23
SCARB2-223ENST00000640640 LRRTM2O43300 516 aa16.48■□□□□ 0.23
SCARB2-223ENST00000640640 GSTT2P0CG29 244 aa16.48■□□□□ 0.23
SCARB2-223ENST00000640640 ULK3Q6PHR2 472 aa16.48■□□□□ 0.23
SCARB2-223ENST00000640640 BTBD2Q9BX70 525 aa16.48■□□□□ 0.23
SCARB2-223ENST00000640640 TMEM121BQ9BXQ6 578 aaPredicted RBP16.48■□□□□ 0.23
SCARB2-223ENST00000640640 THSD1Q9NS62 852 aa16.48■□□□□ 0.23
SCARB2-223ENST00000640640 ABHD17CQ6PCB6 329 aa16.48■□□□□ 0.23
SCARB2-223ENST00000640640 FAM111BQ6SJ93 734 aa16.48■□□□□ 0.23
SCARB2-223ENST00000640640 AMDHD1Q96NU7 426 aa16.48■□□□□ 0.23
SCARB2-223ENST00000640640 OR4K3Q96R72 315 aa16.48■□□□□ 0.23
SCARB2-223ENST00000640640 TMEM38AQ9H6F2 299 aa16.48■□□□□ 0.23
SCARB2-223ENST00000640640 ZNF224Q9NZL3 707 aa16.48■□□□□ 0.23
SCARB2-223ENST00000640640 FARSAQ9Y285 508 aaKnown RBP16.48■□□□□ 0.23
SCARB2-223ENST00000640640 ATG4BQ9Y4P1 393 aa16.48■□□□□ 0.23
SCARB2-223ENST00000640640 PRKRAO75569 313 aaKnown RBP16.47■□□□□ 0.23
SCARB2-223ENST00000640640 ITGA3P26006 1051 aa16.47■□□□□ 0.23
SCARB2-223ENST00000640640 CXCL12P48061 93 aa16.47■□□□□ 0.23
SCARB2-223ENST00000640640 DPTQ07507 201 aa16.47■□□□□ 0.23
SCARB2-223ENST00000640640 LRRN1Q6UXK5 716 aa16.47■□□□□ 0.23
SCARB2-223ENST00000640640 IGFN1Q86VF2 1251 aa16.47■□□□□ 0.23
SCARB2-223ENST00000640640 SYT14Q8NB59 555 aa16.47■□□□□ 0.23
SCARB2-223ENST00000640640 HRASLS5Q96KN8 279 aa16.47■□□□□ 0.23
SCARB2-223ENST00000640640 GNG2P59768 71 aa16.47■□□□□ 0.23
SCARB2-223ENST00000640640 KIAA0895LQ68EN5 471 aa16.47■□□□□ 0.23
SCARB2-223ENST00000640640 DNAJC22Q8N4W6 341 aa16.47■□□□□ 0.23
SCARB2-223ENST00000640640 SDR9C7Q8NEX9 313 aa16.47■□□□□ 0.23
SCARB2-223ENST00000640640 CRB3Q9BUF7 120 aa16.47■□□□□ 0.23
SCARB2-223ENST00000640640 TRIP11Q15643 1979 aa16.47■□□□□ 0.23
SCARB2-223ENST00000640640 HTR3EA5X5Y0 456 aa16.47■□□□□ 0.23
SCARB2-223ENST00000640640 CFL1P23528 166 aaKnown RBP16.47■□□□□ 0.23
SCARB2-223ENST00000640640 FRKP42685 505 aaPredicted RBP16.47■□□□□ 0.23
SCARB2-223ENST00000640640 GAB1Q13480 694 aa16.47■□□□□ 0.23
SCARB2-223ENST00000640640 ERV3-1Q14264 604 aa16.47■□□□□ 0.23
SCARB2-223ENST00000640640 GPR18Q14330 331 aa16.47■□□□□ 0.23
SCARB2-223ENST00000640640 PGGHGQ32M88 737 aa16.47■□□□□ 0.23
SCARB2-223ENST00000640640 MRPL2Q5T653 305 aaKnown RBP16.47■□□□□ 0.23
SCARB2-223ENST00000640640 RAET1LQ5VY80 246 aa16.47■□□□□ 0.23
SCARB2-223ENST00000640640 SLC25A25Q6KCM7 469 aa16.47■□□□□ 0.23
SCARB2-223ENST00000640640 WDR77Q9BQA1 342 aaPredicted RBP16.47■□□□□ 0.23
SCARB2-223ENST00000640640 LRIT1Q9P2V4 623 aa16.47■□□□□ 0.23
SCARB2-223ENST00000640640 SLC35A3Q9Y2D2 325 aa16.47■□□□□ 0.23
SCARB2-223ENST00000640640 PLEKHM1Q9Y4G2 1056 aa16.47■□□□□ 0.23
SCARB2-223ENST00000640640 SLC16A6O15403 523 aa16.47■□□□□ 0.23
SCARB2-223ENST00000640640 FARS2O95363 451 aaKnown RBP16.47■□□□□ 0.23
SCARB2-223ENST00000640640 CAPNS1P04632 268 aa16.47■□□□□ 0.23
SCARB2-223ENST00000640640 CCNOP22674 350 aa16.47■□□□□ 0.23
SCARB2-223ENST00000640640 TSPAN31Q12999 210 aa16.47■□□□□ 0.23
SCARB2-223ENST00000640640 SHISA6Q6ZSJ9 500 aa16.47■□□□□ 0.23
SCARB2-223ENST00000640640 NAXEQ8NCW5 288 aa16.47■□□□□ 0.23
SCARB2-223ENST00000640640 OR4C15Q8NGM1 316 aa16.47■□□□□ 0.23
SCARB2-223ENST00000640640 C19orf43Q9BQ61 176 aa16.47■□□□□ 0.23
SCARB2-223ENST00000640640 NDUFAF4Q9P032 175 aa16.47■□□□□ 0.23
SCARB2-223ENST00000640640 NOP16Q9Y3C1 178 aaKnown RBP16.47■□□□□ 0.23
SCARB2-223ENST00000640640 ZNF432O94892 652 aa16.46■□□□□ 0.23
SCARB2-223ENST00000640640 UBL4AP11441 157 aa16.46■□□□□ 0.23
SCARB2-223ENST00000640640 OR1Q1Q15612 314 aa16.46■□□□□ 0.23
SCARB2-223ENST00000640640 ABCA11PQ4W5N1 156 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms