RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 AP1ARQ63HQ0 302 aa24.24■■□□□ 1.47
VEGFA-231ENST00000640499 PNPT1Q8TCS8 783 aaKnown RBP24.24■■□□□ 1.47
VEGFA-231ENST00000640499 XAGE5Q8WWM1 108 aa24.24■■□□□ 1.47
VEGFA-231ENST00000640499 SARAFQ96BY9 339 aa24.24■■□□□ 1.47
VEGFA-231ENST00000640499 SPDL1Q96EA4 605 aa24.24■■□□□ 1.47
VEGFA-231ENST00000640499 UGT2B28Q9BY64 529 aa24.24■■□□□ 1.47
VEGFA-231ENST00000640499 SDHAF3Q9NRP4 125 aa24.24■■□□□ 1.47
VEGFA-231ENST00000640499 TMEM45AQ9NWC5 275 aa24.24■■□□□ 1.47
VEGFA-231ENST00000640499 SLAMF8Q9P0V8 285 aa24.24■■□□□ 1.47
VEGFA-231ENST00000640499 ASH1LQ9NR48 2969 aaKnown RBP24.24■■□□□ 1.47
VEGFA-231ENST00000640499 CENPVL1A0A0U1RR11 272 aa24.23■■□□□ 1.47
VEGFA-231ENST00000640499 E9PLN8 166 aa24.23■■□□□ 1.47
VEGFA-231ENST00000640499 NR5A2O00482 541 aa24.23■■□□□ 1.47
VEGFA-231ENST00000640499 OIP5O43482 229 aa24.23■■□□□ 1.47
VEGFA-231ENST00000640499 DCTP40126 519 aa24.23■■□□□ 1.47
VEGFA-231ENST00000640499 CLK3P49761 638 aaKnown RBP24.23■■□□□ 1.47
VEGFA-231ENST00000640499 ATP12AP54707 1039 aa24.23■■□□□ 1.47
VEGFA-231ENST00000640499 GFRA1P56159 465 aa24.23■■□□□ 1.47
VEGFA-231ENST00000640499 IRX1P78414 480 aaPredicted RBP24.23■■□□□ 1.47
VEGFA-231ENST00000640499 C17orf67Q0P5P2 114 aa24.23■■□□□ 1.47
VEGFA-231ENST00000640499 MAPK11Q15759 364 aa24.23■■□□□ 1.47
VEGFA-231ENST00000640499 MSRB3Q8IXL7 192 aa24.23■■□□□ 1.47
VEGFA-231ENST00000640499 TRIML2Q8N7C3 387 aa24.23■■□□□ 1.47
VEGFA-231ENST00000640499 OR4K17Q8NGC6 315 aa24.23■■□□□ 1.47
VEGFA-231ENST00000640499 AURKBQ96GD4 344 aaPredicted RBP24.23■■□□□ 1.47
VEGFA-231ENST00000640499 VKORC1Q9BQB6 163 aa24.23■■□□□ 1.47
VEGFA-231ENST00000640499 ZNF350Q9GZX5 532 aa24.23■■□□□ 1.47
VEGFA-231ENST00000640499 RMND5AQ9H871 391 aa24.23■■□□□ 1.47
VEGFA-231ENST00000640499 TAS2R10Q9NYW0 307 aa24.23■■□□□ 1.47
VEGFA-231ENST00000640499 ACAD8Q9UKU7 415 aa24.23■■□□□ 1.47
VEGFA-231ENST00000640499 PCDHB14Q9Y5E9 798 aa24.23■■□□□ 1.47
VEGFA-231ENST00000640499 FAM215AQ9Y5M1 114 aa24.23■■□□□ 1.47
VEGFA-231ENST00000640499 ICE1Q9Y2F5 2266 aa24.23■■□□□ 1.47
VEGFA-231ENST00000640499 SPTAN1Q13813 2472 aaKnown RBP24.23■■□□□ 1.47
VEGFA-231ENST00000640499 C15orf38-AP3S2A0A0A6YYH1 394 aa24.22■■□□□ 1.47
VEGFA-231ENST00000640499 A0A1W2PQD3 144 aa24.22■■□□□ 1.47
VEGFA-231ENST00000640499 NDUFB5O43674 189 aa24.22■■□□□ 1.47
VEGFA-231ENST00000640499 ATP6V1C1P21283 382 aa24.22■■□□□ 1.47
VEGFA-231ENST00000640499 DPP4P27487 766 aa24.22■■□□□ 1.47
VEGFA-231ENST00000640499 METTL21CQ5VZV1 264 aa24.22■■□□□ 1.47
VEGFA-231ENST00000640499 OR14L1PQ8NHC6 308 aa24.22■■□□□ 1.47
VEGFA-231ENST00000640499 ITLN2Q8WWU7 325 aaPredicted RBP24.22■■□□□ 1.47
VEGFA-231ENST00000640499 ROPN1LQ96C74 230 aa24.22■■□□□ 1.47
VEGFA-231ENST00000640499 SLC25A37Q9NYZ2 338 aa24.22■■□□□ 1.47
VEGFA-231ENST00000640499 HECTD1Q9ULT8 2610 aa24.21■■□□□ 1.47
VEGFA-231ENST00000640499 CLDN1O95832 211 aa24.21■■□□□ 1.47
VEGFA-231ENST00000640499 AK1P00568 194 aa24.21■■□□□ 1.47
VEGFA-231ENST00000640499 KHKP50053 298 aa24.21■■□□□ 1.47
VEGFA-231ENST00000640499 DSCR4P56555 118 aaPredicted RBP24.21■■□□□ 1.47
VEGFA-231ENST00000640499 CDSNQ15517 529 aa24.21■■□□□ 1.47
VEGFA-231ENST00000640499 FLYWCH1Q4VC44 716 aa24.21■■□□□ 1.47
VEGFA-231ENST00000640499 TYW3Q6IPR3 259 aaKnown RBP24.21■■□□□ 1.47
VEGFA-231ENST00000640499 ZNF585AQ6P3V2 769 aa24.21■■□□□ 1.47
VEGFA-231ENST00000640499 ZG16BQ96DA0 208 aa24.21■■□□□ 1.47
VEGFA-231ENST00000640499 C1GALT1C1Q96EU7 318 aa24.21■■□□□ 1.47
VEGFA-231ENST00000640499 WDYHV1Q96HA8 205 aa24.21■■□□□ 1.47
VEGFA-231ENST00000640499 HOXD1Q9GZZ0 328 aa24.21■■□□□ 1.47
VEGFA-231ENST00000640499 SAP130Q9H0E3 1048 aa24.21■■□□□ 1.47
VEGFA-231ENST00000640499 TP63Q9H3D4 680 aaPredicted RBP24.21■■□□□ 1.47
VEGFA-231ENST00000640499 TPT1P8Q9HAU6 139 aa24.21■■□□□ 1.47
VEGFA-231ENST00000640499 EXD2Q9NVH0 621 aa24.21■■□□□ 1.47
VEGFA-231ENST00000640499 MKLN1Q9UL63 735 aa24.21■■□□□ 1.47
VEGFA-231ENST00000640499 PHF3Q92576 2039 aaKnown RBP24.2■■□□□ 1.47
VEGFA-231ENST00000640499 KDM4EB2RXH2 506 aaPredicted RBP24.2■■□□□ 1.46
VEGFA-231ENST00000640499 SCDO00767 359 aa24.2■■□□□ 1.46
VEGFA-231ENST00000640499 DYNC1I1O14576 645 aa24.2■■□□□ 1.46
VEGFA-231ENST00000640499 GMFGO60234 142 aa24.2■■□□□ 1.46
VEGFA-231ENST00000640499 STX11O75558 287 aa24.2■■□□□ 1.46
VEGFA-231ENST00000640499 GUSBP08236 651 aa24.2■■□□□ 1.46
VEGFA-231ENST00000640499 TROVE2P10155 538 aaKnown RBP eCLIP24.2■■□□□ 1.463e-17■■■□□ 18.6
VEGFA-231ENST00000640499 ESRRAP11474 423 aaPredicted RBP24.2■■□□□ 1.46
VEGFA-231ENST00000640499 TCEA1P23193 301 aaKnown RBP24.2■■□□□ 1.46
VEGFA-231ENST00000640499 ARFIP2P53365 341 aa24.2■■□□□ 1.46
VEGFA-231ENST00000640499 PER3P56645 1201 aa24.2■■□□□ 1.46
VEGFA-231ENST00000640499 ZNF141Q15928 474 aa24.2■■□□□ 1.46
VEGFA-231ENST00000640499 MAPK14Q16539 360 aa24.2■■□□□ 1.46
VEGFA-231ENST00000640499 SYPL1Q16563 259 aa24.2■■□□□ 1.46
VEGFA-231ENST00000640499 C6orf10Q5SRN2 563 aa24.2■■□□□ 1.46
VEGFA-231ENST00000640499 LRIF1Q5T3J3 769 aa24.2■■□□□ 1.46
VEGFA-231ENST00000640499 WLSQ5T9L3 541 aa24.2■■□□□ 1.46
VEGFA-231ENST00000640499 ARSKQ6UWY0 536 aa24.2■■□□□ 1.46
VEGFA-231ENST00000640499 FRRS1Q6ZNA5 592 aa24.2■■□□□ 1.46
VEGFA-231ENST00000640499 ANKFN1Q8N957 763 aa24.2■■□□□ 1.46
VEGFA-231ENST00000640499 PHF10Q8WUB8 498 aaKnown RBP24.2■■□□□ 1.46
VEGFA-231ENST00000640499 ABTB1Q969K4 478 aaPredicted RBP24.2■■□□□ 1.46
VEGFA-231ENST00000640499 ZNF524Q96C55 264 aa24.2■■□□□ 1.46
VEGFA-231ENST00000640499 NPAS1Q99742 590 aa24.2■■□□□ 1.46
VEGFA-231ENST00000640499 NMUR2Q9GZQ4 415 aa24.2■■□□□ 1.46
VEGFA-231ENST00000640499 PRDM14Q9GZV8 571 aa24.2■■□□□ 1.46
VEGFA-231ENST00000640499 DKKL1Q9UK85 242 aa24.2■■□□□ 1.46
VEGFA-231ENST00000640499 TRIM33Q9UPN9 1127 aa24.2■■□□□ 1.46
VEGFA-231ENST00000640499 RPH3AQ9Y2J0 694 aaPredicted RBP24.2■■□□□ 1.46
VEGFA-231ENST00000640499 A0A096LPI6 279 aa24.19■■□□□ 1.46
VEGFA-231ENST00000640499 TRBV5-3A0A0A0MS03 114 aa24.19■■□□□ 1.46
VEGFA-231ENST00000640499 UGT2B17O75795 530 aa24.19■■□□□ 1.46
VEGFA-231ENST00000640499 KRT75O95678 551 aa24.19■■□□□ 1.46
VEGFA-231ENST00000640499 AGR2O95994 175 aa24.19■■□□□ 1.46
VEGFA-231ENST00000640499 ACVR2AP27037 513 aa24.19■■□□□ 1.46
VEGFA-231ENST00000640499 STARP49675 285 aa24.19■■□□□ 1.46
VEGFA-231ENST00000640499 GPR68Q15743 365 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms