RNA–Protein interactions for RNA: ENST00000640465.1

ZC3H11A-215, Transcript of zinc finger CCCH-type containing 11A, humanhuman

TSL 1 (best)

Gene ZC3H11A, Length 4,365 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H11A-215ENST00000640465 SUMO3P55854 103 aaPredicted RBP3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 RAB2AP61019 212 aa3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 ABHD18Q0P651 414 aa3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 NOGQ13253 232 aa3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 CLN3Q13286 438 aa3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 HABP2Q14520 560 aaPredicted RBP3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 GANABQ14697 944 aaKnown RBP3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 HLXQ14774 488 aaPredicted RBP3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 SF3A2Q15428 464 aaKnown RBP3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 SNAPC1Q16533 368 aa3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 ZSWIM7Q19AV6 140 aa3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 YOD1Q5VVQ6 348 aaPredicted RBP3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 SLC27A4Q6P1M0 643 aa3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 CHRDL2Q6WN34 429 aa3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 C16orf59Q7L2K0 433 aa3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 C12orf40Q86WS4 652 aa3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 RELL2Q8NC24 303 aaPredicted RBP3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 OR10G2Q8NGC3 310 aa3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 POC1BQ8TC44 478 aa3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 METTL6Q8TCB7 284 aa3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 ABHD5Q8WTS1 349 aa3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 ADIPOR1Q96A54 375 aa3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 CHFRQ96EP1 664 aa3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 HARBI1Q96MB7 349 aa3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 MS4A4EQ96PG1 132 aa3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 TSSK3Q96PN8 268 aa3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 SLC38A2Q96QD8 506 aa3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 ACTR6Q9GZN1 396 aa3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 METTL17Q9H7H0 456 aaPredicted RBP3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 SEBOXQ9HB31 216 aaPredicted RBP3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 PDFQ9HBH1 243 aa3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 MRPL17Q9NRX2 175 aaKnown RBP3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 GKN1Q9NS71 199 aa3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 ABCC13Q9NSE7 274 aa3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 IMP3Q9NV31 184 aaKnown RBP3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 MRPL22Q9NWU5 206 aaKnown RBP3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 ZDHHC3Q9NYG2 299 aa3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 CNOT2Q9NZN8 540 aaKnown RBP3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 SEC14L3Q9UDX4 400 aa3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 RGS17Q9UGC6 210 aaPredicted RBP3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 KCND3Q9UK17 655 aa3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 AAR2Q9Y312 384 aaKnown RBP3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 ZFP37Q9Y6Q3 630 aaPredicted RBP3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 HEATR5BQ9P2D3 2071 aa3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 CFAP47Q6ZTR5 3102 aa3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 SPTBP11277 2137 aa3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 A0A1W2PQU0 124 aa3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 MANSC4A6NHS7 340 aaPredicted RBP3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 FAM171A2A8MVW0 826 aa3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 J3QRE1 110 aa3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 ICOSLGO75144 302 aa3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 SCGB1D1O95968 90 aa3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 F11P03951 625 aa3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 SPP1P10451 314 aa3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 IRF1P10914 325 aa3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 SLC2A3P11169 496 aa3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 LAMP1P11279 417 aa3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 AHCYP23526 432 aa3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 CCR1P32246 355 aa3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 RPL9P32969 192 aaKnown RBP3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 SOX6P35712 828 aa3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 LILRA4P59901 499 aa3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 SRSF2Q01130 221 aaKnown RBP3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 GTF2H2Q13888 395 aa3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.84□□□□□ -1.89e-9■■■■■ 54.3
ZC3H11A-215ENST00000640465 RNASE12Q5GAN4 147 aaKnown RBP3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 ATAT1Q5SQI0 421 aa3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 UBXN11Q5T124 520 aa3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 DCAF12L2Q5VW00 463 aa3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 OR5M10Q6IEU7 315 aa3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 GTF2H2CQ6P1K8 395 aa3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 FAM111BQ6SJ93 734 aa3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 ETV3LQ6ZN32 361 aa3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 MOB2Q70IA6 237 aa3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 CMIPQ8IY22 773 aa3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 PUSL1Q8N0Z8 303 aaKnown RBP3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 ZNF808Q8N4W9 903 aaPredicted RBP3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 BBS1Q8NFJ9 593 aa3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 NANPQ8TBE9 248 aa3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 STAG3L4Q8TBR4 150 aa3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 C2CD4CQ8TF44 421 aa3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 NSMAFQ92636 917 aa3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 IGSF8Q969P0 613 aa3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 FAM120BQ96EK7 910 aaKnown RBP3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 TPD52L3Q96J77 140 aa3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 LCORQ96JN0 433 aaPredicted RBP3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 CCDC86Q9H6F5 360 aaKnown RBP3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 IPPKQ9H8X2 491 aa3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 GPN1Q9HCN4 374 aaPredicted RBP3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 MAN2C1Q9NTJ4 1040 aa3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 UBQLN2Q9UHD9 624 aa3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 MGAT4BQ9UQ53 548 aa3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 TIMM8BQ9Y5J9 83 aaPredicted RBP3.84□□□□□ -1.8
ZC3H11A-215ENST00000640465 LRRK1Q38SD2 2015 aa3.83□□□□□ -1.8
ZC3H11A-215ENST00000640465 PQLC2LA1A4F0 135 aa3.83□□□□□ -1.8
ZC3H11A-215ENST00000640465 C5orf58C9J3I9 102 aa3.83□□□□□ -1.8
ZC3H11A-215ENST00000640465 MCRIP1C9JLW8 97 aa3.83□□□□□ -1.8
ZC3H11A-215ENST00000640465 PRSS44E7EML9 344 aa3.83□□□□□ -1.8
ZC3H11A-215ENST00000640465 CLIC1O00299 241 aa3.83□□□□□ -1.8
ZC3H11A-215ENST00000640465 LDOC1O95751 146 aaPredicted RBP3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms