RNA–Protein interactions for RNA: ENST00000639599.1

TARDBP-231, Transcript of TAR DNA binding protein, human

TSL 5

Gene TARDBP, Length 1,283 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-231	ENST00000639599	GALNT10	Q86SR1	603 aa		13.19	□□□□□ -0.3
TARDBP-231	ENST00000639599	OR6Y1	Q8NGX8	325 aa		13.19	□□□□□ -0.3
TARDBP-231	ENST00000639599	OR10D3	Q8NH80	312 aa		13.19	□□□□□ -0.3
TARDBP-231	ENST00000639599	UBLCP1	Q8WVY7	318 aa	Predicted RBP	13.19	□□□□□ -0.3
TARDBP-231	ENST00000639599	SH3YL1	Q96HL8	342 aa	Predicted RBP	13.19	□□□□□ -0.3
TARDBP-231	ENST00000639599	TSSK3	Q96PN8	268 aa		13.19	□□□□□ -0.3
TARDBP-231	ENST00000639599	CCT7	Q99832	543 aa		13.19	□□□□□ -0.3
TARDBP-231	ENST00000639599	RHOXF2	Q9BQY4	288 aa		13.19	□□□□□ -0.3
TARDBP-231	ENST00000639599	REEP4	Q9H6H4	257 aa		13.19	□□□□□ -0.3
TARDBP-231	ENST00000639599	TIGAR	Q9NQ88	270 aa		13.19	□□□□□ -0.3
TARDBP-231	ENST00000639599	MTOR	P42345	2549 aa		13.19	□□□□□ -0.3
TARDBP-231	ENST00000639599	KIAA1549	Q9HCM3	1950 aa		13.19	□□□□□ -0.3
TARDBP-231	ENST00000639599	AKAP6	Q13023	2319 aa		13.18	□□□□□ -0.3
TARDBP-231	ENST00000639599	IGLV3-32	A0A0A0MS00	114 aa		13.18	□□□□□ -0.3
TARDBP-231	ENST00000639599	GJE1	A6NN92	205 aa		13.18	□□□□□ -0.3
TARDBP-231	ENST00000639599		B4DXG7	233 aa		13.18	□□□□□ -0.3
TARDBP-231	ENST00000639599	ALG1L2	C9J202	215 aa		13.18	□□□□□ -0.3
TARDBP-231	ENST00000639599		G3V2L1	256 aa		13.18	□□□□□ -0.3
TARDBP-231	ENST00000639599		H3BNH8	94 aa		13.18	□□□□□ -0.3
TARDBP-231	ENST00000639599	CXCL13	O43927	109 aa		13.18	□□□□□ -0.3
TARDBP-231	ENST00000639599	AQP8	O94778	261 aa		13.18	□□□□□ -0.3
TARDBP-231	ENST00000639599	OXSR1	O95747	527 aa	Predicted RBP	13.18	□□□□□ -0.3
TARDBP-231	ENST00000639599	HSPA4L	O95757	839 aa		13.18	□□□□□ -0.3
TARDBP-231	ENST00000639599	CGA	P01215	116 aa		13.18	□□□□□ -0.3
TARDBP-231	ENST00000639599	PROC	P04070	461 aa		13.18	□□□□□ -0.3
TARDBP-231	ENST00000639599	TUBB	P07437	444 aa		13.18	□□□□□ -0.3
TARDBP-231	ENST00000639599	LCN1	P31025	176 aa		13.18	□□□□□ -0.3
TARDBP-231	ENST00000639599	HPCAL1	P37235	193 aa		13.18	□□□□□ -0.3
TARDBP-231	ENST00000639599	DNAJB13	P59910	316 aa		13.18	□□□□□ -0.3
TARDBP-231	ENST00000639599	LIPM	Q5VYY2	423 aa		13.18	□□□□□ -0.3
TARDBP-231	ENST00000639599	ESPNL	Q6ZVH7	1005 aa		13.18	□□□□□ -0.3
TARDBP-231	ENST00000639599	R3HCC1L	Q7Z5L2	792 aa	Known RBP	13.18	□□□□□ -0.3
TARDBP-231	ENST00000639599	EXOC3L1	Q86VI1	746 aa		13.18	□□□□□ -0.3
TARDBP-231	ENST00000639599	WFDC8	Q8IUA0	241 aa		13.18	□□□□□ -0.3
TARDBP-231	ENST00000639599	DDIAS	Q8IXT1	998 aa		13.18	□□□□□ -0.3
TARDBP-231	ENST00000639599	ZNF527	Q8NB42	609 aa		13.18	□□□□□ -0.3
TARDBP-231	ENST00000639599	LRRN4CL	Q8ND94	238 aa		13.18	□□□□□ -0.3
TARDBP-231	ENST00000639599	OR2V1	Q8NHB1	315 aa		13.18	□□□□□ -0.3
TARDBP-231	ENST00000639599	CIDEC	Q96AQ7	238 aa	Predicted RBP	13.18	□□□□□ -0.3
TARDBP-231	ENST00000639599	COX4I2	Q96KJ9	171 aa		13.18	□□□□□ -0.3
TARDBP-231	ENST00000639599	RNF145	Q96MT1	663 aa		13.18	□□□□□ -0.3
TARDBP-231	ENST00000639599	RTN4R	Q9BZR6	473 aa		13.18	□□□□□ -0.3
TARDBP-231	ENST00000639599	TMEM185B	Q9H7F4	350 aa		13.18	□□□□□ -0.3
TARDBP-231	ENST00000639599	PPCS	Q9HAB8	311 aa		13.18	□□□□□ -0.3
TARDBP-231	ENST00000639599	UBQLN4	Q9NRR5	601 aa		13.18	□□□□□ -0.3
TARDBP-231	ENST00000639599	TMED5	Q9Y3A6	229 aa		13.18	□□□□□ -0.3
TARDBP-231	ENST00000639599	ZFHX3	Q15911	3703 aa		13.18	□□□□□ -0.3
TARDBP-231	ENST00000639599	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	13.17	□□□□□ -0.3
TARDBP-231	ENST00000639599		A0A1W2PPM1	405 aa		13.17	□□□□□ -0.3
TARDBP-231	ENST00000639599		A0A1W2PRB8	838 aa		13.17	□□□□□ -0.3
TARDBP-231	ENST00000639599	TNFSF11	O14788	317 aa		13.17	□□□□□ -0.3
TARDBP-231	ENST00000639599	AZIN1	O14977	448 aa		13.17	□□□□□ -0.3
TARDBP-231	ENST00000639599	SIAH2	O43255	324 aa		13.17	□□□□□ -0.3
TARDBP-231	ENST00000639599	PLIN3	O60664	434 aa		13.17	□□□□□ -0.3
TARDBP-231	ENST00000639599	SS18L1	O75177	396 aa	Predicted RBP	13.17	□□□□□ -0.3
TARDBP-231	ENST00000639599	NKX2-2	O95096	273 aa		13.17	□□□□□ -0.3
TARDBP-231	ENST00000639599	LY6G6D	O95868	133 aa		13.17	□□□□□ -0.3
TARDBP-231	ENST00000639599	OPN1LW	P04000	364 aa		13.17	□□□□□ -0.3
TARDBP-231	ENST00000639599	MAPK1	P28482	360 aa		13.17	□□□□□ -0.3
TARDBP-231	ENST00000639599	PCSK6	P29122	969 aa		13.17	□□□□□ -0.3
TARDBP-231	ENST00000639599	RPL3	P39023	403 aa	Known RBP	13.17	□□□□□ -0.3
TARDBP-231	ENST00000639599	ASMT	P46597	345 aa		13.17	□□□□□ -0.3
TARDBP-231	ENST00000639599	RAC1	P63000	192 aa		13.17	□□□□□ -0.3
TARDBP-231	ENST00000639599	POU6F2	P78424	691 aa	Predicted RBP	13.17	□□□□□ -0.3
TARDBP-231	ENST00000639599	SLC18A2	Q05940	514 aa		13.17	□□□□□ -0.3
TARDBP-231	ENST00000639599	PRSS53	Q2L4Q9	553 aa		13.17	□□□□□ -0.3
TARDBP-231	ENST00000639599	SPDYE7P	Q495Y7	208 aa		13.17	□□□□□ -0.3
TARDBP-231	ENST00000639599	GALNTL6	Q49A17	601 aa		13.17	□□□□□ -0.3
TARDBP-231	ENST00000639599	TMEM201	Q5SNT2	666 aa		13.17	□□□□□ -0.3
TARDBP-231	ENST00000639599	CPTP	Q5TA50	214 aa		13.17	□□□□□ -0.3
TARDBP-231	ENST00000639599	ZNF704	Q6ZNC4	412 aa	Predicted RBP	13.17	□□□□□ -0.3
TARDBP-231	ENST00000639599	KRTAP1-3	Q8IUG1	177 aa		13.17	□□□□□ -0.3
TARDBP-231	ENST00000639599	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	13.17	□□□□□ -0.3
TARDBP-231	ENST00000639599	CLHC1	Q8NHS4	586 aa		13.17	□□□□□ -0.3
TARDBP-231	ENST00000639599	B4GALNT2	Q8NHY0	566 aa		13.17	□□□□□ -0.3
TARDBP-231	ENST00000639599	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	13.17	□□□□□ -0.3	2e-21	■■□□□ 12.4
TARDBP-231	ENST00000639599	EGLN2	Q96KS0	407 aa		13.17	□□□□□ -0.3
TARDBP-231	ENST00000639599	HS3ST6	Q96QI5	342 aa		13.17	□□□□□ -0.3
TARDBP-231	ENST00000639599	ACTR6	Q9GZN1	396 aa		13.17	□□□□□ -0.3
TARDBP-231	ENST00000639599	C12orf49	Q9H741	205 aa		13.17	□□□□□ -0.3
TARDBP-231	ENST00000639599	ZCCHC3	Q9NUD5	404 aa	Known RBP	13.17	□□□□□ -0.3
TARDBP-231	ENST00000639599	MED17	Q9NVC6	651 aa		13.17	□□□□□ -0.3
TARDBP-231	ENST00000639599	EMCN	Q9ULC0	261 aa		13.17	□□□□□ -0.3
TARDBP-231	ENST00000639599	SNX8	Q9Y5X2	465 aa		13.17	□□□□□ -0.3
TARDBP-231	ENST00000639599	EXPH5	Q8NEV8	1989 aa		13.17	□□□□□ -0.3
TARDBP-231	ENST00000639599	DOCK7	Q96N67	2140 aa		13.16	□□□□□ -0.3
TARDBP-231	ENST00000639599	TMEM114	B3SHH9	223 aa		13.16	□□□□□ -0.3
TARDBP-231	ENST00000639599	IGKV1D-16	P01601	117 aa		13.16	□□□□□ -0.3
TARDBP-231	ENST00000639599	NGFR	P08138	427 aa		13.16	□□□□□ -0.3
TARDBP-231	ENST00000639599	KRT16	P08779	473 aa		13.16	□□□□□ -0.3
TARDBP-231	ENST00000639599	PRPH2	P23942	346 aa		13.16	□□□□□ -0.3
TARDBP-231	ENST00000639599	IL32	P24001	234 aa		13.16	□□□□□ -0.3
TARDBP-231	ENST00000639599	CRHR1	P34998	444 aa		13.16	□□□□□ -0.3
TARDBP-231	ENST00000639599	SFTPD	P35247	375 aa		13.16	□□□□□ -0.3
TARDBP-231	ENST00000639599	EIF1	P41567	113 aa	Known RBP	13.16	□□□□□ -0.3
TARDBP-231	ENST00000639599	SLC6A8	P48029	635 aa		13.16	□□□□□ -0.3
TARDBP-231	ENST00000639599	PTH2R	P49190	550 aa		13.16	□□□□□ -0.3
TARDBP-231	ENST00000639599	CARD18	P57730	90 aa		13.16	□□□□□ -0.3
TARDBP-231	ENST00000639599	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	13.16	□□□□□ -0.3
TARDBP-231	ENST00000639599	ZCCHC12	Q6PEW1	402 aa		13.16	□□□□□ -0.3

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