RNA–Protein interactions for RNA: ENST00000637699.1

CLN3-262, Transcript of CLN3, battenin, humanhuman

TSL 2

Gene CLN3, Length 1,228 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-262ENST00000637699 IDUAP35475 653 aa17.32■□□□□ 0.36
CLN3-262ENST00000637699 GSTM5P46439 218 aa17.32■□□□□ 0.36
CLN3-262ENST00000637699 ZNF763Q0D2J5 394 aa17.32■□□□□ 0.36
CLN3-262ENST00000637699 MFSD12Q6NUT3 480 aa17.32■□□□□ 0.36
CLN3-262ENST00000637699 EXOC3L1Q86VI1 746 aa17.32■□□□□ 0.36
CLN3-262ENST00000637699 GATSQ8NAP1 163 aa17.32■□□□□ 0.36
CLN3-262ENST00000637699 GTPBP3Q969Y2 492 aaKnown RBP17.32■□□□□ 0.36
CLN3-262ENST00000637699 S100PBPQ96BU1 408 aa17.32■□□□□ 0.36
CLN3-262ENST00000637699 AMDHD1Q96NU7 426 aa17.32■□□□□ 0.36
CLN3-262ENST00000637699 OR10A4Q9H209 315 aa17.32■□□□□ 0.36
CLN3-262ENST00000637699 TMEM185BQ9H7F4 350 aa17.32■□□□□ 0.36
CLN3-262ENST00000637699 C3orf14Q9HBI5 128 aa17.32■□□□□ 0.36
CLN3-262ENST00000637699 EQTNQ9NQ60 294 aa17.32■□□□□ 0.36
CLN3-262ENST00000637699 GLRX2Q9NS18 164 aa17.32■□□□□ 0.36
CLN3-262ENST00000637699 TMEM216Q9P0N5 145 aa17.32■□□□□ 0.36
CLN3-262ENST00000637699 GRID1Q9ULK0 1009 aa17.32■□□□□ 0.36
CLN3-262ENST00000637699 RNF115Q9Y4L5 304 aa17.32■□□□□ 0.36
CLN3-262ENST00000637699 OVOL3O00110 214 aa17.31■□□□□ 0.36
CLN3-262ENST00000637699 NTN1O95631 604 aa17.31■□□□□ 0.36
CLN3-262ENST00000637699 TUBBP07437 444 aa17.31■□□□□ 0.36
CLN3-262ENST00000637699 SOD3P08294 240 aa17.31■□□□□ 0.36
CLN3-262ENST00000637699 IMPDH1P20839 514 aa17.31■□□□□ 0.36
CLN3-262ENST00000637699 ECHS1P30084 290 aa17.31■□□□□ 0.36
CLN3-262ENST00000637699 AGTR1P30556 359 aa17.31■□□□□ 0.36
CLN3-262ENST00000637699 CDKN1AP38936 164 aa17.31■□□□□ 0.36
CLN3-262ENST00000637699 TSC22D1Q15714 1073 aa17.31■□□□□ 0.36
CLN3-262ENST00000637699 ETFDHQ16134 617 aa17.31■□□□□ 0.36
CLN3-262ENST00000637699 HBMQ6B0K9 141 aa17.31■□□□□ 0.36
CLN3-262ENST00000637699 FAM71E1Q6IPT2 247 aa17.31■□□□□ 0.36
CLN3-262ENST00000637699 RELL1Q8IUW5 271 aa17.31■□□□□ 0.36
CLN3-262ENST00000637699 GTPBP8Q8N3Z3 284 aaPredicted RBP17.31■□□□□ 0.36
CLN3-262ENST00000637699 MNS1Q8NEH6 495 aa17.31■□□□□ 0.36
CLN3-262ENST00000637699 STEAP2Q8NFT2 490 aa17.31■□□□□ 0.36
CLN3-262ENST00000637699 OR2V1Q8NHB1 315 aa17.31■□□□□ 0.36
CLN3-262ENST00000637699 GPR151Q8TDV0 419 aa17.31■□□□□ 0.36
CLN3-262ENST00000637699 IFT81Q8WYA0 676 aa17.31■□□□□ 0.36
CLN3-262ENST00000637699 NEUROG1Q92886 237 aa17.31■□□□□ 0.36
CLN3-262ENST00000637699 FBXW5Q969U6 566 aa17.31■□□□□ 0.36
CLN3-262ENST00000637699 RNF145Q96MT1 663 aa17.31■□□□□ 0.36
CLN3-262ENST00000637699 YAE1D1Q9NRH1 226 aa17.31■□□□□ 0.36
CLN3-262ENST00000637699 SIRT5Q9NXA8 310 aa17.31■□□□□ 0.36
CLN3-262ENST00000637699 TAS2R7Q9NYW3 318 aa17.31■□□□□ 0.36
CLN3-262ENST00000637699 CUBNO60494 3623 aa17.3■□□□□ 0.36
CLN3-262ENST00000637699 CR1P17927 2039 aa17.3■□□□□ 0.36
CLN3-262ENST00000637699 A0A087WZY1 265 aa17.3■□□□□ 0.36
CLN3-262ENST00000637699 A0A0J9YW62 118 aa17.3■□□□□ 0.36
CLN3-262ENST00000637699 CCDC151A5D8V7 595 aa17.3■□□□□ 0.36
CLN3-262ENST00000637699 ADAMDEC1O15204 470 aa17.3■□□□□ 0.36
CLN3-262ENST00000637699 NDUFB5O43674 189 aa17.3■□□□□ 0.36
CLN3-262ENST00000637699 ENO1P06733 434 aaKnown RBP17.3■□□□□ 0.36
CLN3-262ENST00000637699 ACVR1BP36896 505 aa17.3■□□□□ 0.36
CLN3-262ENST00000637699 RAC1P63000 192 aa17.3■□□□□ 0.36
CLN3-262ENST00000637699 LCP2Q13094 533 aa17.3■□□□□ 0.36
CLN3-262ENST00000637699 CPTPQ5TA50 214 aa17.3■□□□□ 0.36
CLN3-262ENST00000637699 ADAM5Q6NVV9 412 aa17.3■□□□□ 0.36
CLN3-262ENST00000637699 PODNL1Q6PEZ8 512 aa17.3■□□□□ 0.36
CLN3-262ENST00000637699 PHC2Q8IXK0 858 aa17.3■□□□□ 0.36
CLN3-262ENST00000637699 ZNF619Q8N2I2 560 aa17.3■□□□□ 0.36
CLN3-262ENST00000637699 OR4C3Q8NH37 302 aa17.3■□□□□ 0.36
CLN3-262ENST00000637699 SMAP2Q8WU79 429 aaPredicted RBP17.3■□□□□ 0.36
CLN3-262ENST00000637699 ROBO4Q8WZ75 1007 aa17.3■□□□□ 0.36
CLN3-262ENST00000637699 OSTF1Q92882 214 aa17.3■□□□□ 0.36
CLN3-262ENST00000637699 FBXO34Q9NWN3 711 aa17.3■□□□□ 0.36
CLN3-262ENST00000637699 ZNF180Q9UJW8 692 aa17.3■□□□□ 0.36
CLN3-262ENST00000637699 LIPT1Q9Y234 373 aa17.3■□□□□ 0.36
CLN3-262ENST00000637699 POLR3HQ9Y535 204 aaPredicted RBP17.3■□□□□ 0.36
CLN3-262ENST00000637699 MAGED1Q9Y5V3 778 aaPredicted RBP17.3■□□□□ 0.36
CLN3-262ENST00000637699 A0A1W2PRB8 838 aa17.29■□□□□ 0.36
CLN3-262ENST00000637699 ALG1L2C9J202 215 aa17.29■□□□□ 0.36
CLN3-262ENST00000637699 OXSR1O95747 527 aaPredicted RBP17.29■□□□□ 0.36
CLN3-262ENST00000637699 IFNA2P01563 188 aa17.29■□□□□ 0.36
CLN3-262ENST00000637699 CD3EP07766 207 aa17.29■□□□□ 0.36
CLN3-262ENST00000637699 SNRPAP09012 282 aaKnown RBP17.29■□□□□ 0.36
CLN3-262ENST00000637699 DANCRP0C864 163 aa17.29■□□□□ 0.36
CLN3-262ENST00000637699 ATP5F1P24539 256 aaPredicted RBP17.29■□□□□ 0.36
CLN3-262ENST00000637699 PSMA4P25789 261 aaKnown RBP17.29■□□□□ 0.36
CLN3-262ENST00000637699 ZNF41P51814 821 aaPredicted RBP17.29■□□□□ 0.36
CLN3-262ENST00000637699 PKNOX1P55347 436 aa17.29■□□□□ 0.36
CLN3-262ENST00000637699 SLC18A2Q05940 514 aa17.29■□□□□ 0.36
CLN3-262ENST00000637699 FAPQ12884 760 aa17.29■□□□□ 0.36
CLN3-262ENST00000637699 IMPG1Q17R60 797 aa17.29■□□□□ 0.36
CLN3-262ENST00000637699 NCMAPQ5T1S8 102 aa17.29■□□□□ 0.36
CLN3-262ENST00000637699 GTF2IRD2BQ6EKJ0 949 aa17.29■□□□□ 0.36
CLN3-262ENST00000637699 ESPNLQ6ZVH7 1005 aa17.29■□□□□ 0.36
CLN3-262ENST00000637699 ZNF551Q7Z340 670 aaPredicted RBP17.29■□□□□ 0.36
CLN3-262ENST00000637699 GTF2IRD2Q86UP8 949 aa17.29■□□□□ 0.36
CLN3-262ENST00000637699 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.29■□□□□ 0.36
CLN3-262ENST00000637699 ZBTB8AQ96BR9 441 aa17.29■□□□□ 0.36
CLN3-262ENST00000637699 SH3YL1Q96HL8 342 aaPredicted RBP17.29■□□□□ 0.36
CLN3-262ENST00000637699 HDHD5Q9BXW7 423 aa17.29■□□□□ 0.36
CLN3-262ENST00000637699 SLCO5A1Q9H2Y9 848 aa17.29■□□□□ 0.36
CLN3-262ENST00000637699 ESRP2Q9H6T0 727 aaKnown RBP17.29■□□□□ 0.36
CLN3-262ENST00000637699 MYNNQ9NPC7 610 aa17.29■□□□□ 0.36
CLN3-262ENST00000637699 MED17Q9NVC6 651 aa17.29■□□□□ 0.36
CLN3-262ENST00000637699 STK38LQ9Y2H1 464 aa17.29■□□□□ 0.36
CLN3-262ENST00000637699 TLX2O43763 284 aaPredicted RBP17.28■□□□□ 0.36
CLN3-262ENST00000637699 ME2P23368 584 aa17.28■□□□□ 0.36
CLN3-262ENST00000637699 IL32P24001 234 aa17.28■□□□□ 0.36
CLN3-262ENST00000637699 PRKAG1P54619 331 aa17.28■□□□□ 0.36
CLN3-262ENST00000637699 PRKAA2P54646 552 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms