RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 KCNK2O95069 426 aa16.57■□□□□ 0.24
CLN6-220ENST00000637450 OXSR1O95747 527 aaPredicted RBP16.57■□□□□ 0.24
CLN6-220ENST00000637450 ACP2P11117 423 aa16.57■□□□□ 0.24
CLN6-220ENST00000637450 ZNF17P17021 662 aa16.57■□□□□ 0.24
CLN6-220ENST00000637450 KRT4P19013 534 aa16.57■□□□□ 0.24
CLN6-220ENST00000637450 TBXA2RP21731 343 aa16.57■□□□□ 0.24
CLN6-220ENST00000637450 SLC6A8P48029 635 aa16.57■□□□□ 0.24
CLN6-220ENST00000637450 SLC18A2Q05940 514 aa16.57■□□□□ 0.24
CLN6-220ENST00000637450 PDE7AQ13946 482 aa16.57■□□□□ 0.24
CLN6-220ENST00000637450 ACKR1Q16570 336 aa16.57■□□□□ 0.24
CLN6-220ENST00000637450 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.57■□□□□ 0.24
CLN6-220ENST00000637450 ZNF550Q7Z398 422 aa16.57■□□□□ 0.24
CLN6-220ENST00000637450 GALNT10Q86SR1 603 aa16.57■□□□□ 0.24
CLN6-220ENST00000637450 C10orf107Q8IVU9 208 aa16.57■□□□□ 0.24
CLN6-220ENST00000637450 GTPBP8Q8N3Z3 284 aaPredicted RBP16.57■□□□□ 0.24
CLN6-220ENST00000637450 EIF1ADQ8N9N8 165 aaKnown RBP16.57■□□□□ 0.24
CLN6-220ENST00000637450 SLC16A11Q8NCK7 471 aa16.57■□□□□ 0.24
CLN6-220ENST00000637450 SLC9A6Q92581 669 aa16.57■□□□□ 0.24
CLN6-220ENST00000637450 ADGRG7Q96K78 797 aa16.57■□□□□ 0.24
CLN6-220ENST00000637450 TSSK3Q96PN8 268 aa16.57■□□□□ 0.24
CLN6-220ENST00000637450 GATA5Q9BWX5 397 aaPredicted RBP16.57■□□□□ 0.24
CLN6-220ENST00000637450 ACSS1Q9NUB1 689 aaPredicted RBP16.57■□□□□ 0.24
CLN6-220ENST00000637450 SH3BP4Q9P0V3 963 aa16.57■□□□□ 0.24
CLN6-220ENST00000637450 DNHD1Q96M86 4753 aa16.57■□□□□ 0.24
CLN6-220ENST00000637450 ABCA2Q9BZC7 2435 aa16.57■□□□□ 0.24
CLN6-220ENST00000637450 SMPD2O60906 423 aa16.56■□□□□ 0.24
CLN6-220ENST00000637450 LINC00032P0C843 101 aa16.56■□□□□ 0.24
CLN6-220ENST00000637450 NEFHP12036 1026 aa16.56■□□□□ 0.24
CLN6-220ENST00000637450 IL11P20809 199 aa16.56■□□□□ 0.24
CLN6-220ENST00000637450 FPR1P21462 350 aa16.56■□□□□ 0.24
CLN6-220ENST00000637450 LOXP28300 417 aaPredicted RBP16.56■□□□□ 0.24
CLN6-220ENST00000637450 ADSLP30566 484 aaPredicted RBP16.56■□□□□ 0.24
CLN6-220ENST00000637450 LCN1P31025 176 aa16.56■□□□□ 0.24
CLN6-220ENST00000637450 EIF1AXP47813 144 aaKnown RBP16.56■□□□□ 0.24
CLN6-220ENST00000637450 LTBQ06643 244 aa16.56■□□□□ 0.24
CLN6-220ENST00000637450 CPTPQ5TA50 214 aa16.56■□□□□ 0.24
CLN6-220ENST00000637450 ANKRD34AQ69YU3 496 aa16.56■□□□□ 0.24
CLN6-220ENST00000637450 ZAR1Q86SH2 424 aa16.56■□□□□ 0.24
CLN6-220ENST00000637450 P3H2Q8IVL5 708 aa16.56■□□□□ 0.24
CLN6-220ENST00000637450 WDR75Q8IWA0 830 aaKnown RBP16.56■□□□□ 0.24
CLN6-220ENST00000637450 OR6Y1Q8NGX8 325 aa16.56■□□□□ 0.24
CLN6-220ENST00000637450 ACTRT2Q8TDY3 377 aa16.56■□□□□ 0.24
CLN6-220ENST00000637450 UBLCP1Q8WVY7 318 aaPredicted RBP16.56■□□□□ 0.24
CLN6-220ENST00000637450 CAVIN3Q969G5 261 aa16.56■□□□□ 0.24
CLN6-220ENST00000637450 C16orf58Q96GQ5 468 aa16.56■□□□□ 0.24
CLN6-220ENST00000637450 ZC3HAV1LQ96H79 300 aaKnown RBP16.56■□□□□ 0.24
CLN6-220ENST00000637450 MS4A4EQ96PG1 132 aa16.56■□□□□ 0.24
CLN6-220ENST00000637450 NPAS1Q99742 590 aa16.56■□□□□ 0.24
CLN6-220ENST00000637450 TRMOQ9BU70 441 aa16.56■□□□□ 0.24
CLN6-220ENST00000637450 PRRG4Q9BZD6 226 aa16.56■□□□□ 0.24
CLN6-220ENST00000637450 KLHL4Q9C0H6 718 aa16.56■□□□□ 0.24
CLN6-220ENST00000637450 PAQR5Q9NXK6 330 aaPredicted RBP16.56■□□□□ 0.24
CLN6-220ENST00000637450 TMED5Q9Y3A6 229 aa16.56■□□□□ 0.24
CLN6-220ENST00000637450 EMC9Q9Y3B6 208 aa16.56■□□□□ 0.24
CLN6-220ENST00000637450 FIS1Q9Y3D6 152 aa16.56■□□□□ 0.24
CLN6-220ENST00000637450 DNAJC15Q9Y5T4 150 aa16.56■□□□□ 0.24
CLN6-220ENST00000637450 A0A1W2PRB8 838 aa16.55■□□□□ 0.24
CLN6-220ENST00000637450 C7orf72A4D263 438 aa16.55■□□□□ 0.24
CLN6-220ENST00000637450 SMIM23A6NLE4 172 aa16.55■□□□□ 0.24
CLN6-220ENST00000637450 LSM1O15116 133 aaKnown RBP16.55■□□□□ 0.24
CLN6-220ENST00000637450 ADAMDEC1O15204 470 aa16.55■□□□□ 0.24
CLN6-220ENST00000637450 TRIM13O60858 407 aa16.55■□□□□ 0.24
CLN6-220ENST00000637450 PSMA4P25789 261 aaKnown RBP16.55■□□□□ 0.24
CLN6-220ENST00000637450 RAC1P63000 192 aa16.55■□□□□ 0.24
CLN6-220ENST00000637450 RPL38P63173 70 aaKnown RBP16.55■□□□□ 0.24
CLN6-220ENST00000637450 PCLAFQ15004 111 aa16.55■□□□□ 0.24
CLN6-220ENST00000637450 DUSP5Q16690 384 aa16.55■□□□□ 0.24
CLN6-220ENST00000637450 CTU2Q2VPK5 515 aaKnown RBP16.55■□□□□ 0.24
CLN6-220ENST00000637450 Q5PR19 223 aa16.55■□□□□ 0.24
CLN6-220ENST00000637450 EXOSC6Q5RKV6 272 aaKnown RBP16.55■□□□□ 0.24
CLN6-220ENST00000637450 KANK2Q63ZY3 851 aa16.55■□□□□ 0.24
CLN6-220ENST00000637450 MFSD12Q6NUT3 480 aa16.55■□□□□ 0.24
CLN6-220ENST00000637450 ZCCHC12Q6PEW1 402 aa16.55■□□□□ 0.24
CLN6-220ENST00000637450 FIGNL1Q6PIW4 674 aa16.55■□□□□ 0.24
CLN6-220ENST00000637450 C4orf33Q8N1A6 199 aa16.55■□□□□ 0.24
CLN6-220ENST00000637450 OR6K3Q8NGY3 331 aa16.55■□□□□ 0.24
CLN6-220ENST00000637450 OR10D3Q8NH80 312 aa16.55■□□□□ 0.24
CLN6-220ENST00000637450 CLHC1Q8NHS4 586 aa16.55■□□□□ 0.24
CLN6-220ENST00000637450 FBXO30Q8TB52 745 aa16.55■□□□□ 0.24
CLN6-220ENST00000637450 EPS8L3Q8TE67 593 aaKnown RBP16.55■□□□□ 0.24
CLN6-220ENST00000637450 ZBTB8AQ96BR9 441 aa16.55■□□□□ 0.24
CLN6-220ENST00000637450 MTERF3Q96E29 417 aa16.55■□□□□ 0.24
CLN6-220ENST00000637450 GMPPAQ96IJ6 420 aaPredicted RBP16.55■□□□□ 0.24
CLN6-220ENST00000637450 HS3ST6Q96QI5 342 aa16.55■□□□□ 0.24
CLN6-220ENST00000637450 UBTD1Q9HAC8 227 aa16.55■□□□□ 0.24
CLN6-220ENST00000637450 MED17Q9NVC6 651 aa16.55■□□□□ 0.24
CLN6-220ENST00000637450 FBXO34Q9NWN3 711 aa16.55■□□□□ 0.24
CLN6-220ENST00000637450 MID2Q9UJV3 735 aa16.55■□□□□ 0.24
CLN6-220ENST00000637450 ARID1AO14497 2285 aa16.55■□□□□ 0.24
CLN6-220ENST00000637450 SS18L1O75177 396 aaPredicted RBP16.54■□□□□ 0.24
CLN6-220ENST00000637450 CHEK2O96017 543 aa16.54■□□□□ 0.24
CLN6-220ENST00000637450 OPN1LWP04000 364 aa16.54■□□□□ 0.24
CLN6-220ENST00000637450 FGF4P08620 206 aa16.54■□□□□ 0.24
CLN6-220ENST00000637450 ALOX5P09917 674 aa16.54■□□□□ 0.24
CLN6-220ENST00000637450 BCKDHAP12694 445 aa16.54■□□□□ 0.24
CLN6-220ENST00000637450 EXOC3L2Q2M3D2 409 aa16.54■□□□□ 0.24
CLN6-220ENST00000637450 PLPPR5Q32ZL2 321 aa16.54■□□□□ 0.24
CLN6-220ENST00000637450 UGT3A2Q3SY77 523 aa16.54■□□□□ 0.24
CLN6-220ENST00000637450 PPP4R4Q6NUP7 873 aa16.54■□□□□ 0.24
CLN6-220ENST00000637450 PRSS57Q6UWY2 283 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms