RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 KCNJ5P48544 419 aa10.76□□□□□ -0.69
CLN6-217ENST00000636964 EEF1A1P68104 462 aaKnown RBP10.76□□□□□ -0.69
CLN6-217ENST00000636964 SPIBQ01892 262 aa10.76□□□□□ -0.69
CLN6-217ENST00000636964 ZMAT1Q5H9K5 638 aa10.76□□□□□ -0.69
CLN6-217ENST00000636964 EEF1A1P5Q5VTE0 462 aa10.76□□□□□ -0.69
CLN6-217ENST00000636964 FAM92BQ6ZTR7 304 aa10.76□□□□□ -0.69
CLN6-217ENST00000636964 AVL9Q8NBF6 648 aa10.76□□□□□ -0.69
CLN6-217ENST00000636964 VANGL1Q8TAA9 524 aaPredicted RBP10.76□□□□□ -0.69
CLN6-217ENST00000636964 APH1BQ8WW43 257 aa10.76□□□□□ -0.69
CLN6-217ENST00000636964 Q96MT0 163 aa10.76□□□□□ -0.69
CLN6-217ENST00000636964 COL21A1Q96P44 957 aa10.76□□□□□ -0.69
CLN6-217ENST00000636964 CCDC3Q9BQI4 270 aa10.76□□□□□ -0.69
CLN6-217ENST00000636964 WFDC6Q9BQY6 131 aa10.76□□□□□ -0.69
CLN6-217ENST00000636964 DIMT1Q9UNQ2 313 aaKnown RBP10.76□□□□□ -0.69
CLN6-217ENST00000636964 PADI2Q9Y2J8 665 aa10.76□□□□□ -0.69
CLN6-217ENST00000636964 CACNA1IQ9P0X4 2223 aa10.75□□□□□ -0.69
CLN6-217ENST00000636964 A0A1W2PPC1 479 aa10.75□□□□□ -0.69
CLN6-217ENST00000636964 SLC9B1P1A6NJY1 282 aa10.75□□□□□ -0.69
CLN6-217ENST00000636964 TNFRSF11BO00300 401 aa10.75□□□□□ -0.69
CLN6-217ENST00000636964 B3GALT2O43825 422 aa10.75□□□□□ -0.69
CLN6-217ENST00000636964 LDB3O75112 727 aa10.75□□□□□ -0.69
CLN6-217ENST00000636964 TP53P04637 393 aaPredicted RBP10.75□□□□□ -0.69
CLN6-217ENST00000636964 BUD31P41223 144 aaPredicted RBP10.75□□□□□ -0.69
CLN6-217ENST00000636964 XKP51811 444 aa10.75□□□□□ -0.69
CLN6-217ENST00000636964 ZNF45Q02386 682 aa10.75□□□□□ -0.69
CLN6-217ENST00000636964 SRSF5Q13243 272 aaKnown RBP10.75□□□□□ -0.69
CLN6-217ENST00000636964 PUM1Q14671 1186 aaKnown RBP eCLIP10.75□□□□□ -0.69
CLN6-217ENST00000636964 MLC1Q15049 377 aa10.75□□□□□ -0.69
CLN6-217ENST00000636964 ELOCQ15369 112 aa10.75□□□□□ -0.69
CLN6-217ENST00000636964 TSSK4Q6SA08 328 aa10.75□□□□□ -0.69
CLN6-217ENST00000636964 KRT74Q7RTS7 529 aa10.75□□□□□ -0.69
CLN6-217ENST00000636964 DEFB123Q8N688 67 aa10.75□□□□□ -0.69
CLN6-217ENST00000636964 ZNF540Q8NDQ6 660 aa10.75□□□□□ -0.69
CLN6-217ENST00000636964 ZNF681Q96N22 645 aa10.75□□□□□ -0.69
CLN6-217ENST00000636964 TREX2Q9BQ50 279 aaPredicted RBP10.75□□□□□ -0.69
CLN6-217ENST00000636964 ROGDIQ9GZN7 287 aa10.75□□□□□ -0.69
CLN6-217ENST00000636964 ANKHQ9HCJ1 492 aa10.75□□□□□ -0.69
CLN6-217ENST00000636964 LYARQ9NX58 379 aaKnown RBP10.75□□□□□ -0.69
CLN6-217ENST00000636964 DAPP1Q9UN19 280 aa10.75□□□□□ -0.69
CLN6-217ENST00000636964 AIREO43918 545 aa10.75□□□□□ -0.69
CLN6-217ENST00000636964 BRINP1O60477 761 aa10.75□□□□□ -0.69
CLN6-217ENST00000636964 UBXN7O94888 489 aa10.75□□□□□ -0.69
CLN6-217ENST00000636964 RECKO95980 971 aa10.75□□□□□ -0.69
CLN6-217ENST00000636964 SMIM10L1P0DMW3 83 aa10.75□□□□□ -0.69
CLN6-217ENST00000636964 ITGAMP11215 1152 aa10.75□□□□□ -0.69
CLN6-217ENST00000636964 NME1P15531 152 aaKnown RBP10.75□□□□□ -0.69
CLN6-217ENST00000636964 HOXB6P17509 224 aaKnown RBP10.75□□□□□ -0.69
CLN6-217ENST00000636964 NUDT1P36639 197 aa10.75□□□□□ -0.69
CLN6-217ENST00000636964 TSFMP43897 325 aaKnown RBP10.75□□□□□ -0.69
CLN6-217ENST00000636964 CCDC190Q86UF4 302 aa10.75□□□□□ -0.69
CLN6-217ENST00000636964 RBM45Q8IUH3 476 aaKnown RBP10.75□□□□□ -0.69
CLN6-217ENST00000636964 FAM109AQ8N4B1 249 aa10.75□□□□□ -0.69
CLN6-217ENST00000636964 SPEM1Q8N4L4 309 aa10.75□□□□□ -0.69
CLN6-217ENST00000636964 CSNK1A1LQ8N752 337 aa10.75□□□□□ -0.69
CLN6-217ENST00000636964 ZNF764Q96H86 408 aaPredicted RBP10.75□□□□□ -0.69
CLN6-217ENST00000636964 SMIM10Q96HG1 83 aa10.75□□□□□ -0.69
CLN6-217ENST00000636964 C10orf90Q96M02 699 aa10.75□□□□□ -0.69
CLN6-217ENST00000636964 PRRG3Q9BZD7 231 aa10.75□□□□□ -0.69
CLN6-217ENST00000636964 TWSG1Q9GZX9 223 aa10.75□□□□□ -0.69
CLN6-217ENST00000636964 QRSL1Q9H0R6 528 aaKnown RBP10.75□□□□□ -0.69
CLN6-217ENST00000636964 OR51E2Q9H255 320 aa10.75□□□□□ -0.69
CLN6-217ENST00000636964 A4GALTQ9NPC4 353 aa10.75□□□□□ -0.69
CLN6-217ENST00000636964 SEMA3GQ9NS98 782 aa10.75□□□□□ -0.69
CLN6-217ENST00000636964 RLIMQ9NVW2 624 aa10.75□□□□□ -0.69
CLN6-217ENST00000636964 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.75□□□□□ -0.692e-6■■□□□ 13.9
CLN6-217ENST00000636964 LYVE1Q9Y5Y7 322 aa10.75□□□□□ -0.69
CLN6-217ENST00000636964 URB1O60287 2271 aaKnown RBP10.75□□□□□ -0.69
CLN6-217ENST00000636964 CABIN1Q9Y6J0 2220 aa10.75□□□□□ -0.69
CLN6-217ENST00000636964 URADA6NGE7 173 aa10.74□□□□□ -0.69
CLN6-217ENST00000636964 SGK494L7N484 410 aa10.74□□□□□ -0.69
CLN6-217ENST00000636964 OR7A10O76100 309 aa10.74□□□□□ -0.69
CLN6-217ENST00000636964 C21orf33P30042 268 aaPredicted RBP10.74□□□□□ -0.69
CLN6-217ENST00000636964 TNFRSF17Q02223 184 aa10.74□□□□□ -0.69
CLN6-217ENST00000636964 ZP2Q05996 745 aa10.74□□□□□ -0.69
CLN6-217ENST00000636964 ABHD13Q7L211 337 aa10.74□□□□□ -0.69
CLN6-217ENST00000636964 NOXA1Q86UR1 476 aa10.74□□□□□ -0.69
CLN6-217ENST00000636964 GALNT11Q8NCW6 608 aa10.74□□□□□ -0.69
CLN6-217ENST00000636964 TMEM52Q8NDY8 209 aa10.74□□□□□ -0.69
CLN6-217ENST00000636964 NUP43Q8NFH3 380 aa10.74□□□□□ -0.69
CLN6-217ENST00000636964 GPR32P1Q8NGA4 272 aa10.74□□□□□ -0.69
CLN6-217ENST00000636964 SLC38A4Q969I6 547 aa10.74□□□□□ -0.69
CLN6-217ENST00000636964 ELP4Q96EB1 424 aa10.74□□□□□ -0.69
CLN6-217ENST00000636964 MAP3K3Q99759 626 aa10.74□□□□□ -0.69
CLN6-217ENST00000636964 CBY1Q9Y3M2 126 aa10.74□□□□□ -0.69
CLN6-217ENST00000636964 RGS10O43665 173 aa10.74□□□□□ -0.69
CLN6-217ENST00000636964 EXOC3L2Q2M3D2 409 aa10.74□□□□□ -0.69
CLN6-217ENST00000636964 NKAIN2Q5VXU1 208 aa10.74□□□□□ -0.69
CLN6-217ENST00000636964 KDM4DQ6B0I6 523 aa10.74□□□□□ -0.69
CLN6-217ENST00000636964 Q6ZPB1 254 aaPredicted RBP10.74□□□□□ -0.69
CLN6-217ENST00000636964 SNAPC3Q92966 411 aa10.74□□□□□ -0.69
CLN6-217ENST00000636964 FEVQ99581 238 aa10.74□□□□□ -0.69
CLN6-217ENST00000636964 SLC38A3Q99624 504 aa10.74□□□□□ -0.69
CLN6-217ENST00000636964 RBCK1Q9BYM8 510 aa10.74□□□□□ -0.69
CLN6-217ENST00000636964 TINAGL1Q9GZM7 467 aaPredicted RBP10.74□□□□□ -0.69
CLN6-217ENST00000636964 MMP28Q9H239 520 aa10.74□□□□□ -0.69
CLN6-217ENST00000636964 RPRD1BQ9NQG5 326 aaKnown RBP10.74□□□□□ -0.69
CLN6-217ENST00000636964 KRT84Q9NSB2 600 aa10.74□□□□□ -0.69
CLN6-217ENST00000636964 SEC14L3Q9UDX4 400 aa10.74□□□□□ -0.69
CLN6-217ENST00000636964 NUFIP1Q9UHK0 495 aaKnown RBP10.74□□□□□ -0.69
CLN6-217ENST00000636964 MUTYHQ9UIF7 546 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms