RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 HPGDP15428 266 aa14.63□□□□□ -0.07
CLN6-216ENST00000636876 CPOXP36551 454 aa14.63□□□□□ -0.07
CLN6-216ENST00000636876 SLC25A3Q00325 362 aa14.63□□□□□ -0.07
CLN6-216ENST00000636876 FOXO1Q12778 655 aa14.63□□□□□ -0.07
CLN6-216ENST00000636876 SCARB2Q14108 478 aa14.63□□□□□ -0.07
CLN6-216ENST00000636876 KLHL26Q53HC5 615 aa14.63□□□□□ -0.07
CLN6-216ENST00000636876 RPS26P11Q5JNZ5 115 aaPredicted RBP14.63□□□□□ -0.07
CLN6-216ENST00000636876 REEP3Q6NUK4 255 aa14.63□□□□□ -0.07
CLN6-216ENST00000636876 C16orf89Q6UX73 402 aa14.63□□□□□ -0.07
CLN6-216ENST00000636876 MARCH3Q86UD3 253 aa14.63□□□□□ -0.07
CLN6-216ENST00000636876 PGAM4Q8N0Y7 254 aa14.63□□□□□ -0.07
CLN6-216ENST00000636876 ZFP62Q8NB50 900 aaPredicted RBP14.63□□□□□ -0.07
CLN6-216ENST00000636876 RBM15BQ8NDT2 890 aaKnown RBP14.63□□□□□ -0.07
CLN6-216ENST00000636876 BBS10Q8TAM1 723 aa14.63□□□□□ -0.07
CLN6-216ENST00000636876 OIT3Q8WWZ8 545 aa14.63□□□□□ -0.07
CLN6-216ENST00000636876 ZNF597Q96LX8 424 aa14.63□□□□□ -0.07
CLN6-216ENST00000636876 FRMD6Q96NE9 622 aa14.63□□□□□ -0.07
CLN6-216ENST00000636876 RTN4RQ9BZR6 473 aa14.63□□□□□ -0.07
CLN6-216ENST00000636876 MTHFD2LQ9H903 347 aaPredicted RBP14.63□□□□□ -0.07
CLN6-216ENST00000636876 BCL2L10Q9HD36 194 aa14.63□□□□□ -0.07
CLN6-216ENST00000636876 SPAG4Q9NPE6 437 aa14.63□□□□□ -0.07
CLN6-216ENST00000636876 TUBA8Q9NY65 449 aaPredicted RBP14.63□□□□□ -0.07
CLN6-216ENST00000636876 TMEM181Q9P2C4 612 aa14.63□□□□□ -0.07
CLN6-216ENST00000636876 ABCD2Q9UBJ2 740 aa14.63□□□□□ -0.07
CLN6-216ENST00000636876 KCNE5Q9UJ90 142 aa14.63□□□□□ -0.07
CLN6-216ENST00000636876 ANAPC2Q9UJX6 822 aa14.63□□□□□ -0.07
CLN6-216ENST00000636876 BOKQ9UMX3 212 aaPredicted RBP14.63□□□□□ -0.07
CLN6-216ENST00000636876 WIF1Q9Y5W5 379 aa14.63□□□□□ -0.07
CLN6-216ENST00000636876 TENM4Q6N022 2769 aa14.63□□□□□ -0.07
CLN6-216ENST00000636876 DSPPQ9NZW4 1301 aa14.63□□□□□ -0.07
CLN6-216ENST00000636876 CENPVL1A0A0U1RR11 272 aa14.62□□□□□ -0.07
CLN6-216ENST00000636876 C2orf72A6NCS6 295 aa14.62□□□□□ -0.07
CLN6-216ENST00000636876 LRRC3CA6NJW4 275 aa14.62□□□□□ -0.07
CLN6-216ENST00000636876 FAM220BPB1ANY3 271 aa14.62□□□□□ -0.07
CLN6-216ENST00000636876 UGT2B17O75795 530 aa14.62□□□□□ -0.07
CLN6-216ENST00000636876 PGM3O95394 542 aa14.62□□□□□ -0.07
CLN6-216ENST00000636876 RPS4Y1P22090 263 aaKnown RBP14.62□□□□□ -0.07
CLN6-216ENST00000636876 PCGF2P35227 344 aa14.62□□□□□ -0.07
CLN6-216ENST00000636876 EEFSECP57772 596 aaKnown RBP14.62□□□□□ -0.07
CLN6-216ENST00000636876 PMP22Q01453 160 aa14.62□□□□□ -0.07
CLN6-216ENST00000636876 LIPEQ05469 1076 aa14.62□□□□□ -0.07
CLN6-216ENST00000636876 C19orf57Q0VDD7 668 aa14.62□□□□□ -0.07
CLN6-216ENST00000636876 MAPK14Q16539 360 aa14.62□□□□□ -0.07
CLN6-216ENST00000636876 VMACQ2NL98 169 aa14.62□□□□□ -0.07
CLN6-216ENST00000636876 PDZK1Q5T2W1 519 aa14.62□□□□□ -0.07
CLN6-216ENST00000636876 PACS2Q86VP3 889 aa14.62□□□□□ -0.07
CLN6-216ENST00000636876 SLC30A8Q8IWU4 369 aa14.62□□□□□ -0.07
CLN6-216ENST00000636876 HIPK4Q8NE63 616 aa14.62□□□□□ -0.07
CLN6-216ENST00000636876 ZG16BQ96DA0 208 aa14.62□□□□□ -0.07
CLN6-216ENST00000636876 TMEM41AQ96HV5 264 aa14.62□□□□□ -0.07
CLN6-216ENST00000636876 REXO5Q96IC2 774 aaKnown RBP14.62□□□□□ -0.07
CLN6-216ENST00000636876 ZFP64Q9NPA5 681 aa14.62□□□□□ -0.07
CLN6-216ENST00000636876 SUCOQ9UBS9 1254 aaKnown RBP14.62□□□□□ -0.07
CLN6-216ENST00000636876 USP22Q9UPT9 525 aa14.62□□□□□ -0.07
CLN6-216ENST00000636876 ANGPT4Q9Y264 503 aa14.62□□□□□ -0.07
CLN6-216ENST00000636876 DTNAQ9Y4J8 743 aa14.62□□□□□ -0.07
CLN6-216ENST00000636876 AGAP5A6NIR3 686 aa14.61□□□□□ -0.07
CLN6-216ENST00000636876 SNPHO15079 494 aa14.61□□□□□ -0.07
CLN6-216ENST00000636876 NDUFB5O43674 189 aa14.61□□□□□ -0.07
CLN6-216ENST00000636876 ANGPTL1O95841 491 aa14.61□□□□□ -0.07
CLN6-216ENST00000636876 RFC3P40938 356 aa14.61□□□□□ -0.07
CLN6-216ENST00000636876 MASP1P48740 699 aa14.61□□□□□ -0.07
CLN6-216ENST00000636876 GSK3BP49841 420 aa14.61□□□□□ -0.07
CLN6-216ENST00000636876 BNIP1Q12981 228 aa14.61□□□□□ -0.07
CLN6-216ENST00000636876 INPP5JQ15735 1006 aaPredicted RBP14.61□□□□□ -0.07
CLN6-216ENST00000636876 FNDC7Q5VTL7 733 aa14.61□□□□□ -0.07
CLN6-216ENST00000636876 TIGD3Q6B0B8 471 aa14.61□□□□□ -0.07
CLN6-216ENST00000636876 ERICH5Q6P6B1 374 aa14.61□□□□□ -0.07
CLN6-216ENST00000636876 RINLQ6ZS11 566 aa14.61□□□□□ -0.07
CLN6-216ENST00000636876 HMGN2P46Q86SG4 172 aa14.61□□□□□ -0.07
CLN6-216ENST00000636876 IFNEQ86WN2 208 aa14.61□□□□□ -0.07
CLN6-216ENST00000636876 PEX5LQ8IYB4 626 aa14.61□□□□□ -0.07
CLN6-216ENST00000636876 MICU2Q8IYU8 434 aa14.61□□□□□ -0.07
CLN6-216ENST00000636876 DEFB107AQ8IZN7 70 aa14.61□□□□□ -0.07
CLN6-216ENST00000636876 ZNF614Q8N883 585 aa14.61□□□□□ -0.07
CLN6-216ENST00000636876 GATSQ8NAP1 163 aa14.61□□□□□ -0.07
CLN6-216ENST00000636876 OR2T12Q8NG77 320 aa14.61□□□□□ -0.07
CLN6-216ENST00000636876 JSRP1Q96MG2 331 aaPredicted RBP14.61□□□□□ -0.07
CLN6-216ENST00000636876 TAAR6Q96RI8 345 aa14.61□□□□□ -0.07
CLN6-216ENST00000636876 QRSL1Q9H0R6 528 aaKnown RBP14.61□□□□□ -0.07
CLN6-216ENST00000636876 SDHAF3Q9NRP4 125 aa14.61□□□□□ -0.07
CLN6-216ENST00000636876 ADA2Q9NZK5 511 aa14.61□□□□□ -0.07
CLN6-216ENST00000636876 GMPR2Q9P2T1 348 aaKnown RBP14.61□□□□□ -0.07
CLN6-216ENST00000636876 HRH3Q9Y5N1 445 aa14.61□□□□□ -0.07
CLN6-216ENST00000636876 MYO18BQ8IUG5 2567 aa14.61□□□□□ -0.07
CLN6-216ENST00000636876 SERINC4A6NH21 518 aa14.6□□□□□ -0.07
CLN6-216ENST00000636876 C17orf51A8MQB3 221 aa14.6□□□□□ -0.07
CLN6-216ENST00000636876 H3BNH8 94 aa14.6□□□□□ -0.07
CLN6-216ENST00000636876 GNB5O14775 395 aa14.6□□□□□ -0.07
CLN6-216ENST00000636876 DNAJA2O60884 412 aa14.6□□□□□ -0.07
CLN6-216ENST00000636876 GLSO94925 669 aaPredicted RBP14.6□□□□□ -0.07
CLN6-216ENST00000636876 DBIP07108 87 aaKnown RBP14.6□□□□□ -0.07
CLN6-216ENST00000636876 ETS2P15036 469 aa14.6□□□□□ -0.07
CLN6-216ENST00000636876 ELAVL4P26378 380 aaKnown RBP14.6□□□□□ -0.07
CLN6-216ENST00000636876 RNF144AP50876 292 aaPredicted RBP14.6□□□□□ -0.07
CLN6-216ENST00000636876 PCBP3P57721 371 aaKnown RBP14.6□□□□□ -0.07
CLN6-216ENST00000636876 PLGLB1Q02325 96 aa14.6□□□□□ -0.07
CLN6-216ENST00000636876 C17orf67Q0P5P2 114 aa14.6□□□□□ -0.07
CLN6-216ENST00000636876 CD226Q15762 336 aa14.6□□□□□ -0.07
CLN6-216ENST00000636876 KRT73Q86Y46 540 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms