RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 LIPJQ5W064 366 aa16.84■□□□□ 0.29
CACNA1A-227ENST00000636549 GLIS1Q8NBF1 620 aa16.84■□□□□ 0.29
CACNA1A-227ENST00000636549 NTAN1Q96AB6 310 aa16.84■□□□□ 0.29
CACNA1A-227ENST00000636549 BTBD17A6NE02 478 aa16.84■□□□□ 0.29
CACNA1A-227ENST00000636549 CREBL2O60519 120 aaPredicted RBP16.84■□□□□ 0.29
CACNA1A-227ENST00000636549 OMGP23515 440 aa16.84■□□□□ 0.29
CACNA1A-227ENST00000636549 BDKRB2P30411 391 aa16.84■□□□□ 0.29
CACNA1A-227ENST00000636549 SSTR4P31391 388 aa16.84■□□□□ 0.29
CACNA1A-227ENST00000636549 IL34Q6ZMJ4 242 aa16.84■□□□□ 0.29
CACNA1A-227ENST00000636549 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.84■□□□□ 0.29
CACNA1A-227ENST00000636549 ZNF891A8MT65 544 aaPredicted RBP16.84■□□□□ 0.29
CACNA1A-227ENST00000636549 F2P00734 622 aa16.84■□□□□ 0.29
CACNA1A-227ENST00000636549 IRF4Q15306 451 aa16.84■□□□□ 0.29
CACNA1A-227ENST00000636549 TMEM173Q86WV6 379 aaPredicted RBP16.84■□□□□ 0.29
CACNA1A-227ENST00000636549 WDR6Q9NNW5 1121 aaKnown RBP16.84■□□□□ 0.29
CACNA1A-227ENST00000636549 GPR83Q9NYM4 423 aa16.84■□□□□ 0.29
CACNA1A-227ENST00000636549 IER3IP1Q9Y5U9 82 aa16.84■□□□□ 0.29
CACNA1A-227ENST00000636549 AGLP35573 1532 aa16.84■□□□□ 0.29
CACNA1A-227ENST00000636549 MRPL33O75394 65 aaKnown RBP16.84■□□□□ 0.29
CACNA1A-227ENST00000636549 SLC34A2O95436 690 aa16.84■□□□□ 0.29
CACNA1A-227ENST00000636549 UNGP13051 313 aaPredicted RBP16.84■□□□□ 0.29
CACNA1A-227ENST00000636549 RAB31Q13636 194 aa16.84■□□□□ 0.29
CACNA1A-227ENST00000636549 KCNJ11Q14654 390 aa16.84■□□□□ 0.29
CACNA1A-227ENST00000636549 IGDCC3Q8IVU1 814 aa16.84■□□□□ 0.29
CACNA1A-227ENST00000636549 OR8J1Q8NGP2 316 aa16.84■□□□□ 0.29
CACNA1A-227ENST00000636549 NKD2Q969F2 451 aaPredicted RBP16.84■□□□□ 0.29
CACNA1A-227ENST00000636549 NOSIPQ9Y314 301 aaKnown RBP16.84■□□□□ 0.29
CACNA1A-227ENST00000636549 ZNF705GA8MUZ8 300 aaPredicted RBP16.83■□□□□ 0.29
CACNA1A-227ENST00000636549 TIA1P31483 386 aaKnown RBP eCLIP16.83■□□□□ 0.29
CACNA1A-227ENST00000636549 NHSL2Q5HYW2 709 aa16.83■□□□□ 0.29
CACNA1A-227ENST00000636549 FJX1Q86VR8 437 aa16.83■□□□□ 0.29
CACNA1A-227ENST00000636549 PSAT1Q9Y617 370 aa16.83■□□□□ 0.29
CACNA1A-227ENST00000636549 OR5K4A6NMS3 321 aa16.83■□□□□ 0.29
CACNA1A-227ENST00000636549 UBFD1O14562 309 aaKnown RBP16.83■□□□□ 0.29
CACNA1A-227ENST00000636549 CAPNS1P04632 268 aa16.83■□□□□ 0.29
CACNA1A-227ENST00000636549 PABPC4LP0CB38 370 aaKnown RBP16.83■□□□□ 0.29
CACNA1A-227ENST00000636549 PLA1AQ53H76 456 aa16.83■□□□□ 0.29
CACNA1A-227ENST00000636549 ZNF689Q96CS4 500 aaPredicted RBP16.83■□□□□ 0.29
CACNA1A-227ENST00000636549 SLC29A3Q9BZD2 475 aa16.83■□□□□ 0.29
CACNA1A-227ENST00000636549 OR10J4P0C629 311 aa16.83■□□□□ 0.28
CACNA1A-227ENST00000636549 IL2RGP31785 369 aa16.83■□□□□ 0.28
CACNA1A-227ENST00000636549 BIDP55957 195 aa16.83■□□□□ 0.28
CACNA1A-227ENST00000636549 NKX6-1P78426 367 aaPredicted RBP16.83■□□□□ 0.28
CACNA1A-227ENST00000636549 SMIM15Q7Z3B0 74 aa16.83■□□□□ 0.28
CACNA1A-227ENST00000636549 OR5D18Q8NGL1 313 aa16.83■□□□□ 0.28
CACNA1A-227ENST00000636549 OR1J4Q8NGS1 313 aa16.83■□□□□ 0.28
CACNA1A-227ENST00000636549 PHOX2BQ99453 314 aa16.83■□□□□ 0.28
CACNA1A-227ENST00000636549 SIDT1Q9NXL6 827 aaKnown RBP16.83■□□□□ 0.28
CACNA1A-227ENST00000636549 LRRC10BA6NIK2 292 aa16.83■□□□□ 0.28
CACNA1A-227ENST00000636549 UBL4AP11441 157 aa16.83■□□□□ 0.28
CACNA1A-227ENST00000636549 CD6P30203 668 aa16.83■□□□□ 0.28
CACNA1A-227ENST00000636549 NKX2-5P52952 324 aaPredicted RBP16.83■□□□□ 0.28
CACNA1A-227ENST00000636549 INCA1Q0VD86 236 aa16.83■□□□□ 0.28
CACNA1A-227ENST00000636549 CMTM1Q8IZ96 169 aa16.83■□□□□ 0.28
CACNA1A-227ENST00000636549 OR14A2Q96R54 314 aa16.83■□□□□ 0.28
CACNA1A-227ENST00000636549 PIK3CBP42338 1070 aa16.83■□□□□ 0.28
CACNA1A-227ENST00000636549 CDKN2CP42773 168 aa16.83■□□□□ 0.28
CACNA1A-227ENST00000636549 OR4D1Q15615 310 aa16.83■□□□□ 0.28
CACNA1A-227ENST00000636549 XKR5Q6UX68 686 aa16.83■□□□□ 0.28
CACNA1A-227ENST00000636549 FKBP10Q96AY3 582 aa16.83■□□□□ 0.28
CACNA1A-227ENST00000636549 TRMT61AQ96FX7 289 aaKnown RBP16.83■□□□□ 0.28
CACNA1A-227ENST00000636549 TRMT2BQ96GJ1 504 aaKnown RBP16.83■□□□□ 0.28
CACNA1A-227ENST00000636549 MARCH4Q9P2E8 410 aaPredicted RBP16.83■□□□□ 0.28
CACNA1A-227ENST00000636549 PRAMEF27A3QJZ7 478 aa16.82■□□□□ 0.28
CACNA1A-227ENST00000636549 NDUFB7P17568 137 aa16.82■□□□□ 0.28
CACNA1A-227ENST00000636549 RHCEP18577 417 aa16.82■□□□□ 0.28
CACNA1A-227ENST00000636549 PRAMEF9Q5VWM5 478 aa16.82■□□□□ 0.28
CACNA1A-227ENST00000636549 TRAPPC2LH3BP13 241 aa16.82■□□□□ 0.28
CACNA1A-227ENST00000636549 BPIP17213 487 aa16.82■□□□□ 0.28
CACNA1A-227ENST00000636549 ART1P52961 327 aa16.82■□□□□ 0.28
CACNA1A-227ENST00000636549 ELAVL3Q14576 367 aaKnown RBP16.82■□□□□ 0.28
CACNA1A-227ENST00000636549 TMEM205Q6UW68 189 aa16.82■□□□□ 0.28
CACNA1A-227ENST00000636549 ZNF679Q8IYX0 411 aa16.82■□□□□ 0.28
CACNA1A-227ENST00000636549 OR14K1Q8NGZ2 314 aa16.82■□□□□ 0.28
CACNA1A-227ENST00000636549 NKX3-1Q99801 234 aaPredicted RBP16.82■□□□□ 0.28
CACNA1A-227ENST00000636549 OR10A5Q9H207 317 aa16.82■□□□□ 0.28
CACNA1A-227ENST00000636549 OR10A2Q9H208 303 aa16.82■□□□□ 0.28
CACNA1A-227ENST00000636549 PLCXD1Q9NUJ7 323 aa16.82■□□□□ 0.28
CACNA1A-227ENST00000636549 ATP23Q9Y6H3 246 aa16.82■□□□□ 0.28
CACNA1A-227ENST00000636549 DCCP43146 1447 aa16.82■□□□□ 0.28
CACNA1A-227ENST00000636549 SNAP29O95721 258 aa16.82■□□□□ 0.28
CACNA1A-227ENST00000636549 SHEQ5VZ18 495 aa16.82■□□□□ 0.28
CACNA1A-227ENST00000636549 PPP1R3BQ86XI6 285 aa16.82■□□□□ 0.28
CACNA1A-227ENST00000636549 ZDHHC16Q969W1 377 aa16.82■□□□□ 0.28
CACNA1A-227ENST00000636549 SERTM2A0A1B0GWG4 89 aa16.82■□□□□ 0.28
CACNA1A-227ENST00000636549 SLC22A1O15245 554 aa16.82■□□□□ 0.28
CACNA1A-227ENST00000636549 DEFB109BQ30KR1 87 aa16.82■□□□□ 0.28
CACNA1A-227ENST00000636549 UGT2A3Q6UWM9 527 aa16.82■□□□□ 0.28
CACNA1A-227ENST00000636549 TMEM184AQ6ZMB5 413 aa16.82■□□□□ 0.28
CACNA1A-227ENST00000636549 METTL4Q8N3J2 472 aa16.82■□□□□ 0.28
CACNA1A-227ENST00000636549 C2CD4AQ8NCU7 369 aaPredicted RBP16.82■□□□□ 0.28
CACNA1A-227ENST00000636549 FAM83FQ8NEG4 500 aaPredicted RBP16.82■□□□□ 0.28
CACNA1A-227ENST00000636549 OR9Q2Q8NGE9 314 aa16.82■□□□□ 0.28
CACNA1A-227ENST00000636549 APIPQ96GX9 242 aa16.82■□□□□ 0.28
CACNA1A-227ENST00000636549 CUTCQ9NTM9 273 aa16.82■□□□□ 0.28
CACNA1A-227ENST00000636549 FAM86C1Q9NVL1 165 aa16.82■□□□□ 0.28
CACNA1A-227ENST00000636549 RAB3AP20336 220 aa16.82■□□□□ 0.28
CACNA1A-227ENST00000636549 SLC35A2P78381 396 aa16.82■□□□□ 0.28
CACNA1A-227ENST00000636549 IKZF1Q13422 519 aa16.82■□□□□ 0.28
CACNA1A-227ENST00000636549 SLC35F5Q8WV83 523 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms