RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 IGLV3-32A0A0A0MS00 114 aa16.16■□□□□ 0.18
PNKP-225ENST00000636214 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.16■□□□□ 0.18
PNKP-225ENST00000636214 A0A1W2PRB8 838 aa16.16■□□□□ 0.18
PNKP-225ENST00000636214 A8MXE2 369 aa16.16■□□□□ 0.18
PNKP-225ENST00000636214 B4DXG7 233 aa16.16■□□□□ 0.18
PNKP-225ENST00000636214 ALG1L2C9J202 215 aa16.16■□□□□ 0.18
PNKP-225ENST00000636214 SKAP2O75563 359 aaPredicted RBP16.16■□□□□ 0.18
PNKP-225ENST00000636214 LYPLA1O75608 230 aaPredicted RBP16.16■□□□□ 0.18
PNKP-225ENST00000636214 TNFSF13O75888 250 aa16.16■□□□□ 0.18
PNKP-225ENST00000636214 KCNK2O95069 426 aa16.16■□□□□ 0.18
PNKP-225ENST00000636214 SLU7O95391 586 aaKnown RBP16.16■□□□□ 0.18
PNKP-225ENST00000636214 IGKV1D-16P01601 117 aa16.16■□□□□ 0.18
PNKP-225ENST00000636214 RAF1P04049 648 aa16.16■□□□□ 0.18
PNKP-225ENST00000636214 NGFRP08138 427 aa16.16■□□□□ 0.18
PNKP-225ENST00000636214 KRT16P08779 473 aa16.16■□□□□ 0.18
PNKP-225ENST00000636214 ZNF17P17021 662 aa16.16■□□□□ 0.18
PNKP-225ENST00000636214 ME2P23368 584 aa16.16■□□□□ 0.18
PNKP-225ENST00000636214 FRKP42685 505 aaPredicted RBP16.16■□□□□ 0.18
PNKP-225ENST00000636214 CLDN15P56746 228 aa16.16■□□□□ 0.18
PNKP-225ENST00000636214 POU6F2P78424 691 aaPredicted RBP16.16■□□□□ 0.18
PNKP-225ENST00000636214 LSM12Q3MHD2 195 aaKnown RBP16.16■□□□□ 0.18
PNKP-225ENST00000636214 CPTPQ5TA50 214 aa16.16■□□□□ 0.18
PNKP-225ENST00000636214 PAMR1Q6UXH9 720 aa16.16■□□□□ 0.18
PNKP-225ENST00000636214 GATSQ8NAP1 163 aa16.16■□□□□ 0.18
PNKP-225ENST00000636214 SLC16A11Q8NCK7 471 aa16.16■□□□□ 0.18
PNKP-225ENST00000636214 FIG4Q92562 907 aa16.16■□□□□ 0.18
PNKP-225ENST00000636214 PGM2Q96G03 612 aa16.16■□□□□ 0.18
PNKP-225ENST00000636214 C1orf50Q9BV19 199 aa16.16■□□□□ 0.18
PNKP-225ENST00000636214 RTN4RQ9BZR6 473 aa16.16■□□□□ 0.18
PNKP-225ENST00000636214 NTMQ9P121 344 aa16.16■□□□□ 0.18
PNKP-225ENST00000636214 ATP6V1HQ9UI12 483 aa16.16■□□□□ 0.18
PNKP-225ENST00000636214 FAF1Q9UNN5 650 aaPredicted RBP16.16■□□□□ 0.18
PNKP-225ENST00000636214 HRNRQ86YZ3 2850 aaPredicted RBP16.16■□□□□ 0.18
PNKP-225ENST00000636214 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.15■□□□□ 0.18
PNKP-225ENST00000636214 EIF1AYO14602 144 aaKnown RBP16.15■□□□□ 0.18
PNKP-225ENST00000636214 PLGP00747 810 aaPredicted RBP16.15■□□□□ 0.18
PNKP-225ENST00000636214 CD99P14209 185 aa16.15■□□□□ 0.18
PNKP-225ENST00000636214 TBXA2RP21731 343 aa16.15■□□□□ 0.18
PNKP-225ENST00000636214 EIF1AXP47813 144 aaKnown RBP16.15■□□□□ 0.18
PNKP-225ENST00000636214 SUCLG1P53597 346 aaKnown RBP16.15■□□□□ 0.18
PNKP-225ENST00000636214 MAD2L1Q13257 205 aaPredicted RBP16.15■□□□□ 0.18
PNKP-225ENST00000636214 TP53BP2Q13625 1128 aa16.15■□□□□ 0.18
PNKP-225ENST00000636214 LASP1Q14847 261 aaKnown RBP16.15■□□□□ 0.18
PNKP-225ENST00000636214 MLC1Q15049 377 aa16.15■□□□□ 0.18
PNKP-225ENST00000636214 POU4F3Q15319 338 aa16.15■□□□□ 0.18
PNKP-225ENST00000636214 DUSP5Q16690 384 aa16.15■□□□□ 0.18
PNKP-225ENST00000636214 UGT3A2Q3SY77 523 aa16.15■□□□□ 0.18
PNKP-225ENST00000636214 PDSS1Q5T2R2 415 aa16.15■□□□□ 0.18
PNKP-225ENST00000636214 VWA1Q6PCB0 445 aa16.15■□□□□ 0.18
PNKP-225ENST00000636214 WDR75Q8IWA0 830 aaKnown RBP16.15■□□□□ 0.18
PNKP-225ENST00000636214 METTL25Q8N6Q8 603 aa16.15■□□□□ 0.18
PNKP-225ENST00000636214 ZNF527Q8NB42 609 aa16.15■□□□□ 0.18
PNKP-225ENST00000636214 OR7A2PQ8NGA2 310 aa16.15■□□□□ 0.18
PNKP-225ENST00000636214 OR56A1Q8NGH5 318 aa16.15■□□□□ 0.18
PNKP-225ENST00000636214 FNDC9Q8TBE3 224 aa16.15■□□□□ 0.18
PNKP-225ENST00000636214 HOXB13Q92826 284 aaPredicted RBP16.15■□□□□ 0.18
PNKP-225ENST00000636214 ZBTB8AQ96BR9 441 aa16.15■□□□□ 0.18
PNKP-225ENST00000636214 TUBGCP3Q96CW5 907 aa16.15■□□□□ 0.18
PNKP-225ENST00000636214 FAM120BQ96EK7 910 aaKnown RBP16.15■□□□□ 0.18
PNKP-225ENST00000636214 GIMAP5Q96F15 307 aa16.15■□□□□ 0.18
PNKP-225ENST00000636214 ALPK1Q96QP1 1244 aa16.15■□□□□ 0.18
PNKP-225ENST00000636214 MED18Q9BUE0 208 aa16.15■□□□□ 0.18
PNKP-225ENST00000636214 UBQLN4Q9NRR5 601 aa16.15■□□□□ 0.18
PNKP-225ENST00000636214 PAQR5Q9NXK6 330 aaPredicted RBP16.15■□□□□ 0.18
PNKP-225ENST00000636214 ZNF226Q9NYT6 803 aa16.15■□□□□ 0.18
PNKP-225ENST00000636214 GIMAP2Q9UG22 337 aa16.15■□□□□ 0.18
PNKP-225ENST00000636214 MCTS1Q9ULC4 181 aaKnown RBP16.15■□□□□ 0.18
PNKP-225ENST00000636214 PROCRQ9UNN8 238 aa16.15■□□□□ 0.18
PNKP-225ENST00000636214 H0YC42 278 aa16.14■□□□□ 0.17
PNKP-225ENST00000636214 H3BNH8 94 aa16.14■□□□□ 0.17
PNKP-225ENST00000636214 CFLARO15519 480 aa16.14■□□□□ 0.17
PNKP-225ENST00000636214 SOX30O94993 753 aa16.14■□□□□ 0.17
PNKP-225ENST00000636214 SYNGR4O95473 234 aa16.14■□□□□ 0.17
PNKP-225ENST00000636214 POU2F1P14859 743 aa16.14■□□□□ 0.17
PNKP-225ENST00000636214 CD79BP40259 229 aa16.14■□□□□ 0.17
PNKP-225ENST00000636214 MAP3K8P41279 467 aa16.14■□□□□ 0.17
PNKP-225ENST00000636214 TPD52P55327 224 aaPredicted RBP16.14■□□□□ 0.17
PNKP-225ENST00000636214 CLDN20P56880 219 aa16.14■□□□□ 0.17
PNKP-225ENST00000636214 OCRLQ01968 901 aa16.14■□□□□ 0.17
PNKP-225ENST00000636214 KRT71Q3SY84 523 aa16.14■□□□□ 0.17
PNKP-225ENST00000636214 XKR7Q5GH72 579 aa16.14■□□□□ 0.17
PNKP-225ENST00000636214 IL23RQ5VWK5 629 aa16.14■□□□□ 0.17
PNKP-225ENST00000636214 APOOLQ6UXV4 268 aa16.14■□□□□ 0.17
PNKP-225ENST00000636214 NUDCD3Q8IVD9 361 aa16.14■□□□□ 0.17
PNKP-225ENST00000636214 ADAMTS15Q8TE58 950 aa16.14■□□□□ 0.17
PNKP-225ENST00000636214 AENQ8WTP8 325 aaKnown RBP16.14■□□□□ 0.17
PNKP-225ENST00000636214 OR5P2Q8WZ92 322 aa16.14■□□□□ 0.17
PNKP-225ENST00000636214 MOAP1Q96BY2 351 aa16.14■□□□□ 0.17
PNKP-225ENST00000636214 STARD4Q96DR4 205 aa16.14■□□□□ 0.17
PNKP-225ENST00000636214 OTUB1Q96FW1 271 aaPredicted RBP16.14■□□□□ 0.17
PNKP-225ENST00000636214 SH3YL1Q96HL8 342 aaPredicted RBP16.14■□□□□ 0.17
PNKP-225ENST00000636214 STACQ99469 402 aa16.14■□□□□ 0.17
PNKP-225ENST00000636214 BTBD2Q9BX70 525 aa16.14■□□□□ 0.17
PNKP-225ENST00000636214 CXXC4Q9H2H0 198 aa16.14■□□□□ 0.17
PNKP-225ENST00000636214 NEUROD4Q9HD90 331 aa16.14■□□□□ 0.17
PNKP-225ENST00000636214 FANCFQ9NPI8 374 aa16.14■□□□□ 0.17
PNKP-225ENST00000636214 DUSP22Q9NRW4 184 aa16.14■□□□□ 0.17
PNKP-225ENST00000636214 EMC9Q9Y3B6 208 aa16.14■□□□□ 0.17
PNKP-225ENST00000636214 SHISA8B8ZZ34 492 aa16.13■□□□□ 0.17
PNKP-225ENST00000636214 CTIFO43310 598 aaKnown RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms