RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 FAM46AQ96IP4 442 aaKnown RBP5.26□□□□□ -1.57
SCN1A-209ENST00000635750 TRIB1Q96RU8 372 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 LMF1Q96S06 567 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 CMSS1Q9BQ75 279 aaKnown RBP5.26□□□□□ -1.57
SCN1A-209ENST00000635750 KCND3Q9UK17 655 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 POLHQ9Y253 713 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 FAM96BQ9Y3D0 163 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 RHBDD3Q9Y3P4 386 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 ACTL7AQ9Y615 435 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 A0A096LPI6 279 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 SMIM30A4D0T7 59 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 GOSR2O14653 212 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 SLC43A1O75387 559 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 DIRAS1O95057 198 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 METTL15P1P0C7V9 234 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 BCKDHBP21953 392 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 GJA5P36382 358 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 CSN1S1P47710 185 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 SNTB2Q13425 540 aaKnown RBP5.26□□□□□ -1.57
SCN1A-209ENST00000635750 PRICKLE2Q7Z3G6 844 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 OR2A12Q8NGT7 310 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 FOXRED1Q96CU9 486 aaPredicted RBP5.26□□□□□ -1.57
SCN1A-209ENST00000635750 IGSF21Q96ID5 467 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 C1orf74Q96LT6 269 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 SPO11Q9Y5K1 396 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 ENTPD2Q9Y5L3 495 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 UBR1Q8IWV7 1749 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 TRIP11Q15643 1979 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 CDC14CA4D256 554 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 EME2A4GXA9 379 aaPredicted RBP5.26□□□□□ -1.57
SCN1A-209ENST00000635750 PCDH17O14917 1159 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 YY2O15391 372 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 COCHO43405 550 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 RGS11O94810 467 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 EPOP01588 193 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 HOXD11P31277 338 aaPredicted RBP5.26□□□□□ -1.57
SCN1A-209ENST00000635750 AKR1C1Q04828 323 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 CLVS2Q5SYC1 327 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 ZNF684Q5T5D7 378 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 Q6ZSR6 202 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 USP51Q70EK9 711 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 FNDC9Q8TBE3 224 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 ZNF566Q969W8 418 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 HHIPQ96QV1 700 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 CLSTN3Q9BQT9 956 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 NICN1Q9BSH3 213 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 NPFFR2Q9Y5X5 522 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 LRRC10BA6NIK2 292 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 INMT-MINDY4F8WBC2 141 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 NUDT21O43809 227 aaKnown RBP5.26□□□□□ -1.57
SCN1A-209ENST00000635750 S1PR4O95977 384 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 SERPINF1P36955 418 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 SLC1A3P43003 542 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 STC1P52823 247 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 GALNT1Q10472 559 aaPredicted RBP5.26□□□□□ -1.57
SCN1A-209ENST00000635750 MICAQ29983 383 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 SLC36A2Q495M3 483 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 PDZD9Q8IXQ8 264 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 CLDN19Q8N6F1 224 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 SUMF2Q8NBJ7 301 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 LRR1Q96L50 414 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 ZFYVE21Q9BQ24 234 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 PDCD1LG2Q9BQ51 273 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 TMEM43Q9BTV4 400 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 ST6GALNAC4Q9H4F1 302 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 LGALS13Q9UHV8 139 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 TRAPPC2LQ9UL33 140 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 STUB1Q9UNE7 303 aa5.26□□□□□ -1.57
SCN1A-209ENST00000635750 SALL3Q9BXA9 1300 aa5.25□□□□□ -1.57
SCN1A-209ENST00000635750 E7ESA3 106 aa5.25□□□□□ -1.57
SCN1A-209ENST00000635750 GPR39O43194 453 aa5.25□□□□□ -1.57
SCN1A-209ENST00000635750 OR2T1O43869 369 aa5.25□□□□□ -1.57
SCN1A-209ENST00000635750 TCN2P20062 427 aa5.25□□□□□ -1.57
SCN1A-209ENST00000635750 PYCR1P32322 319 aa5.25□□□□□ -1.57
SCN1A-209ENST00000635750 KDELR2P33947 212 aa5.25□□□□□ -1.57
SCN1A-209ENST00000635750 PPT1P50897 306 aa5.25□□□□□ -1.57
SCN1A-209ENST00000635750 SUB1P53999 127 aaKnown RBP eCLIP5.25□□□□□ -1.57
SCN1A-209ENST00000635750 GPR50Q13585 617 aa5.25□□□□□ -1.57
SCN1A-209ENST00000635750 LTC4SQ16873 150 aa5.25□□□□□ -1.57
SCN1A-209ENST00000635750 HEPHL1Q6MZM0 1159 aa5.25□□□□□ -1.57
SCN1A-209ENST00000635750 CRTC1Q6UUV9 634 aa5.25□□□□□ -1.57
SCN1A-209ENST00000635750 SBSNQ6UWP8 590 aa5.25□□□□□ -1.57
SCN1A-209ENST00000635750 SCCPDHQ8NBX0 429 aa5.25□□□□□ -1.57
SCN1A-209ENST00000635750 ANKRD9Q96BM1 317 aaPredicted RBP5.25□□□□□ -1.57
SCN1A-209ENST00000635750 CMTM3Q96MX0 182 aa5.25□□□□□ -1.57
SCN1A-209ENST00000635750 MS4A4EQ96PG1 132 aa5.25□□□□□ -1.57
SCN1A-209ENST00000635750 GPR22Q99680 433 aa5.25□□□□□ -1.57
SCN1A-209ENST00000635750 TPPP3Q9BW30 176 aa5.25□□□□□ -1.57
SCN1A-209ENST00000635750 ACSS1Q9NUB1 689 aaPredicted RBP5.25□□□□□ -1.57
SCN1A-209ENST00000635750 POT1Q9NUX5 634 aa5.25□□□□□ -1.57
SCN1A-209ENST00000635750 SLC6A5Q9Y345 797 aa5.25□□□□□ -1.57
SCN1A-209ENST00000635750 IGHG1P01857 330 aa5.25□□□□□ -1.57
SCN1A-209ENST00000635750 GAAP10253 952 aa5.25□□□□□ -1.57
SCN1A-209ENST00000635750 ZNF182P17025 639 aaPredicted RBP5.25□□□□□ -1.57
SCN1A-209ENST00000635750 ZNF181Q2M3W8 571 aa5.25□□□□□ -1.57
SCN1A-209ENST00000635750 ANKRD22Q5VYY1 191 aa5.25□□□□□ -1.57
SCN1A-209ENST00000635750 ATG9BQ674R7 924 aa5.25□□□□□ -1.57
SCN1A-209ENST00000635750 KLHDC8AQ8IYD2 350 aa5.25□□□□□ -1.57
SCN1A-209ENST00000635750 MS4A15Q8N5U1 240 aa5.25□□□□□ -1.57
SCN1A-209ENST00000635750 FAM122AQ96E09 287 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms