RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 PTHP01270 115 aa20.43■□□□□ 0.86
PNKP-220ENST00000627232 PRG2P13727 222 aa20.43■□□□□ 0.86
PNKP-220ENST00000627232 GNSP15586 552 aa20.43■□□□□ 0.86
PNKP-220ENST00000627232 ZNF141Q15928 474 aa20.43■□□□□ 0.86
PNKP-220ENST00000627232 YOD1Q5VVQ6 348 aaPredicted RBP20.43■□□□□ 0.86
PNKP-220ENST00000627232 ZNF613Q6PF04 617 aa20.43■□□□□ 0.86
PNKP-220ENST00000627232 TMEM80Q96HE8 168 aa20.43■□□□□ 0.86
PNKP-220ENST00000627232 SLC38A2Q96QD8 506 aa20.43■□□□□ 0.86
PNKP-220ENST00000627232 G6PC3Q9BUM1 346 aa20.43■□□□□ 0.86
PNKP-220ENST00000627232 TEX12Q9BXU0 123 aa20.43■□□□□ 0.86
PNKP-220ENST00000627232 OR10A5Q9H207 317 aa20.43■□□□□ 0.86
PNKP-220ENST00000627232 DSN1Q9H410 356 aa20.43■□□□□ 0.86
PNKP-220ENST00000627232 PRDM6Q9NQX0 595 aa20.43■□□□□ 0.86
PNKP-220ENST00000627232 IL20Q9NYY1 176 aa20.43■□□□□ 0.86
PNKP-220ENST00000627232 PRODH2Q9UF12 536 aa20.43■□□□□ 0.86
PNKP-220ENST00000627232 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP20.43■□□□□ 0.86
PNKP-220ENST00000627232 ERVK-19Q9WJR5 959 aa20.43■□□□□ 0.86
PNKP-220ENST00000627232 HRKO00198 91 aa20.43■□□□□ 0.86
PNKP-220ENST00000627232 TLX2O43763 284 aaPredicted RBP20.43■□□□□ 0.86
PNKP-220ENST00000627232 CLPXO76031 633 aa20.43■□□□□ 0.86
PNKP-220ENST00000627232 IFNA16P05015 189 aa20.43■□□□□ 0.86
PNKP-220ENST00000627232 GKN3PP0CG01 181 aa20.43■□□□□ 0.86
PNKP-220ENST00000627232 DBTP11182 482 aaKnown RBP20.43■□□□□ 0.86
PNKP-220ENST00000627232 NR4A1P22736 598 aa20.43■□□□□ 0.86
PNKP-220ENST00000627232 CSF2RBP32927 897 aa20.43■□□□□ 0.86
PNKP-220ENST00000627232 LIPAP38571 399 aa20.43■□□□□ 0.86
PNKP-220ENST00000627232 SEPHS1P49903 392 aa20.43■□□□□ 0.86
PNKP-220ENST00000627232 BNC1Q01954 994 aa20.43■□□□□ 0.86
PNKP-220ENST00000627232 ZNF91Q05481 1191 aa20.43■□□□□ 0.86
PNKP-220ENST00000627232 SNAPC1Q16533 368 aa20.43■□□□□ 0.86
PNKP-220ENST00000627232 MOGQ16653 247 aa20.43■□□□□ 0.86
PNKP-220ENST00000627232 AMZ1Q400G9 498 aa20.43■□□□□ 0.86
PNKP-220ENST00000627232 NPSR1Q6W5P4 371 aa20.43■□□□□ 0.86
PNKP-220ENST00000627232 SLC46A3Q7Z3Q1 461 aa20.43■□□□□ 0.86
PNKP-220ENST00000627232 WDR5BQ86VZ2 330 aa20.43■□□□□ 0.86
PNKP-220ENST00000627232 ZNF615Q8N8J6 731 aa20.43■□□□□ 0.86
PNKP-220ENST00000627232 OR8D4Q8NGM9 314 aa20.43■□□□□ 0.86
PNKP-220ENST00000627232 TMEM163Q8TC26 289 aa20.43■□□□□ 0.86
PNKP-220ENST00000627232 SH3GL3Q99963 347 aa20.43■□□□□ 0.86
PNKP-220ENST00000627232 CNPPD1Q9BV87 410 aa20.43■□□□□ 0.86
PNKP-220ENST00000627232 TSSK6Q9BXA6 273 aa20.43■□□□□ 0.86
PNKP-220ENST00000627232 RACGAP1Q9H0H5 632 aa20.43■□□□□ 0.86
PNKP-220ENST00000627232 PLGRKTQ9HBL7 147 aa20.43■□□□□ 0.86
PNKP-220ENST00000627232 CAPN10Q9HC96 672 aa20.43■□□□□ 0.86
PNKP-220ENST00000627232 SPTBP11277 2137 aa20.42■□□□□ 0.86
PNKP-220ENST00000627232 NPIPB9F8W1W9 429 aa20.42■□□□□ 0.86
PNKP-220ENST00000627232 PIP5K1CO60331 668 aa20.42■□□□□ 0.86
PNKP-220ENST00000627232 IGKV1D-16P01601 117 aa20.42■□□□□ 0.86
PNKP-220ENST00000627232 CSTF2P33240 577 aaKnown RBP eCLIP20.42■□□□□ 0.86
PNKP-220ENST00000627232 DHPSP49366 369 aaPredicted RBP20.42■□□□□ 0.86
PNKP-220ENST00000627232 MLLT1Q03111 559 aaPredicted RBP20.42■□□□□ 0.86
PNKP-220ENST00000627232 SYT14P1Q58G82 188 aa20.42■□□□□ 0.86
PNKP-220ENST00000627232 PDZK1Q5T2W1 519 aa20.42■□□□□ 0.86
PNKP-220ENST00000627232 LINC00299Q6ZSB3 139 aa20.42■□□□□ 0.86
PNKP-220ENST00000627232 TTLL10Q6ZVT0 673 aa20.42■□□□□ 0.86
PNKP-220ENST00000627232 CMIPQ8IY22 773 aa20.42■□□□□ 0.86
PNKP-220ENST00000627232 DEFB123Q8N688 67 aa20.42■□□□□ 0.86
PNKP-220ENST00000627232 Q8N9G6 341 aaPredicted RBP20.42■□□□□ 0.86
PNKP-220ENST00000627232 RCBTB1Q8NDN9 531 aa20.42■□□□□ 0.86
PNKP-220ENST00000627232 OR1L3Q8NH93 324 aa20.42■□□□□ 0.86
PNKP-220ENST00000627232 C16orf52Q8NHV5 167 aa20.42■□□□□ 0.86
PNKP-220ENST00000627232 DTNBP1Q96EV8 351 aa20.42■□□□□ 0.86
PNKP-220ENST00000627232 ZNF582Q96NG8 517 aaPredicted RBP20.42■□□□□ 0.86
PNKP-220ENST00000627232 TMEM27Q9HBJ8 222 aa20.42■□□□□ 0.86
PNKP-220ENST00000627232 ZNF223Q9UK11 482 aaPredicted RBP20.42■□□□□ 0.86
PNKP-220ENST00000627232 CDH10Q9Y6N8 788 aa20.42■□□□□ 0.86
PNKP-220ENST00000627232 ADAMTS20P59510 1910 aa20.41■□□□□ 0.86
PNKP-220ENST00000627232 IRGMA1A4Y4 181 aa20.41■□□□□ 0.86
PNKP-220ENST00000627232 SNTNA6NMZ2 147 aa20.41■□□□□ 0.86
PNKP-220ENST00000627232 M0R3G1 203 aa20.41■□□□□ 0.86
PNKP-220ENST00000627232 HYAL3O43820 417 aaPredicted RBP20.41■□□□□ 0.86
PNKP-220ENST00000627232 NTN1O95631 604 aa20.41■□□□□ 0.86
PNKP-220ENST00000627232 CT45A8P0DMV1 189 aa20.41■□□□□ 0.86
PNKP-220ENST00000627232 CT45A9P0DMV2 189 aa20.41■□□□□ 0.86
PNKP-220ENST00000627232 PNLIPP16233 465 aa20.41■□□□□ 0.86
PNKP-220ENST00000627232 RHAGQ02094 409 aa20.41■□□□□ 0.86
PNKP-220ENST00000627232 PLAURQ03405 335 aa20.41■□□□□ 0.86
PNKP-220ENST00000627232 PRKCDQ05655 676 aa20.41■□□□□ 0.86
PNKP-220ENST00000627232 FGFBP1Q14512 234 aa20.41■□□□□ 0.86
PNKP-220ENST00000627232 CT45A2Q5DJT8 189 aa20.41■□□□□ 0.86
PNKP-220ENST00000627232 ZC3H14Q6PJT7 736 aaKnown RBP20.41■□□□□ 0.86
PNKP-220ENST00000627232 ZNF620Q6ZNG0 422 aa20.41■□□□□ 0.86
PNKP-220ENST00000627232 QSOX2Q6ZRP7 698 aa20.41■□□□□ 0.86
PNKP-220ENST00000627232 C11orf74Q86VG3 221 aa20.41■□□□□ 0.86
PNKP-220ENST00000627232 MEX3DQ86XN8 651 aaKnown RBP20.41■□□□□ 0.86
PNKP-220ENST00000627232 GPR135Q8IZ08 494 aa20.41■□□□□ 0.86
PNKP-220ENST00000627232 CYP4Z2PQ8N1L4 340 aa20.41■□□□□ 0.86
PNKP-220ENST00000627232 OR4N2Q8NGD1 307 aa20.41■□□□□ 0.86
PNKP-220ENST00000627232 WDR36Q8NI36 951 aaKnown RBP20.41■□□□□ 0.86
PNKP-220ENST00000627232 OIT3Q8WWZ8 545 aa20.41■□□□□ 0.86
PNKP-220ENST00000627232 CNOT9Q92600 299 aaKnown RBP20.41■□□□□ 0.86
PNKP-220ENST00000627232 HS6ST2Q96MM7 605 aa20.41■□□□□ 0.86
PNKP-220ENST00000627232 TBC1D23Q9NUY8 699 aa20.41■□□□□ 0.86
PNKP-220ENST00000627232 MED17Q9NVC6 651 aa20.41■□□□□ 0.86
PNKP-220ENST00000627232 MRPS18AQ9NVS2 196 aaKnown RBP20.41■□□□□ 0.86
PNKP-220ENST00000627232 SUSD2Q9UGT4 822 aa20.41■□□□□ 0.86
PNKP-220ENST00000627232 TMEM5Q9Y2B1 443 aa20.41■□□□□ 0.86
PNKP-220ENST00000627232 DTX4Q9Y2E6 619 aa20.41■□□□□ 0.86
PNKP-220ENST00000627232 MAU2Q9Y6X3 613 aa20.41■□□□□ 0.86
PNKP-220ENST00000627232 CLPSP04118 112 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms