RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 COMTD1Q86VU5 262 aa16.38■□□□□ 0.21
PTCHD3-202ENST00000622555 ARMC10Q8N2F6 343 aa16.38■□□□□ 0.21
PTCHD3-202ENST00000622555 PAPD5Q8NDF8 572 aaKnown RBP16.38■□□□□ 0.21
PTCHD3-202ENST00000622555 POLHQ9Y253 713 aa16.38■□□□□ 0.21
PTCHD3-202ENST00000622555 SYT5O00445 386 aa16.37■□□□□ 0.21
PTCHD3-202ENST00000622555 SCDO00767 359 aa16.37■□□□□ 0.21
PTCHD3-202ENST00000622555 TIPRLO75663 272 aa16.37■□□□□ 0.21
PTCHD3-202ENST00000622555 OXSR1O95747 527 aaPredicted RBP16.37■□□□□ 0.21
PTCHD3-202ENST00000622555 FBXO45P0C2W1 286 aa16.37■□□□□ 0.21
PTCHD3-202ENST00000622555 HOXB6P17509 224 aaKnown RBP16.37■□□□□ 0.21
PTCHD3-202ENST00000622555 TBXA2RP21731 343 aa16.37■□□□□ 0.21
PTCHD3-202ENST00000622555 ST13P50502 369 aaKnown RBP16.37■□□□□ 0.21
PTCHD3-202ENST00000622555 EEF1A1P68104 462 aaKnown RBP16.37■□□□□ 0.21
PTCHD3-202ENST00000622555 MRPL2Q5T653 305 aaKnown RBP16.37■□□□□ 0.21
PTCHD3-202ENST00000622555 IRAK1BP1Q5VVH5 260 aa16.37■□□□□ 0.21
PTCHD3-202ENST00000622555 ZDHHC21Q8IVQ6 265 aa16.37■□□□□ 0.21
PTCHD3-202ENST00000622555 PQLC1Q8N2U9 271 aa16.37■□□□□ 0.21
PTCHD3-202ENST00000622555 CLIP4Q8N3C7 705 aa16.37■□□□□ 0.21
PTCHD3-202ENST00000622555 ASB15Q8WXK1 588 aa16.37■□□□□ 0.21
PTCHD3-202ENST00000622555 PSMF1Q92530 271 aa16.37■□□□□ 0.21
PTCHD3-202ENST00000622555 SPACA9Q96E40 222 aaPredicted RBP16.37■□□□□ 0.21
PTCHD3-202ENST00000622555 LHPPQ9H008 270 aa16.37■□□□□ 0.21
PTCHD3-202ENST00000622555 ARMC7Q9H6L4 198 aa16.37■□□□□ 0.21
PTCHD3-202ENST00000622555 YY1AP1Q9H869 796 aa16.37■□□□□ 0.21
PTCHD3-202ENST00000622555 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.37■□□□□ 0.21
PTCHD3-202ENST00000622555 RLIMQ9NVW2 624 aa16.37■□□□□ 0.21
PTCHD3-202ENST00000622555 KLHL28Q9NXS3 571 aa16.37■□□□□ 0.21
PTCHD3-202ENST00000622555 DKK4Q9UBT3 224 aa16.37■□□□□ 0.21
PTCHD3-202ENST00000622555 LRCH1Q9Y2L9 728 aa16.37■□□□□ 0.21
PTCHD3-202ENST00000622555 hCG_2039718K7EN88 272 aa16.36■□□□□ 0.21
PTCHD3-202ENST00000622555 EPPINO95925 133 aa16.36■□□□□ 0.21
PTCHD3-202ENST00000622555 LGI1O95970 557 aa16.36■□□□□ 0.21
PTCHD3-202ENST00000622555 FABP3P05413 133 aa16.36■□□□□ 0.21
PTCHD3-202ENST00000622555 MEP1AQ16819 746 aa16.36■□□□□ 0.21
PTCHD3-202ENST00000622555 KLHL26Q53HC5 615 aa16.36■□□□□ 0.21
PTCHD3-202ENST00000622555 ACER2Q5QJU3 275 aa16.36■□□□□ 0.21
PTCHD3-202ENST00000622555 OGFRL1Q5TC84 451 aaPredicted RBP16.36■□□□□ 0.21
PTCHD3-202ENST00000622555 RNF220Q5VTB9 566 aa16.36■□□□□ 0.21
PTCHD3-202ENST00000622555 OPN5Q6U736 354 aa16.36■□□□□ 0.21
PTCHD3-202ENST00000622555 CARM1Q86X55 608 aa16.36■□□□□ 0.21
PTCHD3-202ENST00000622555 TMEM156Q8N614 296 aa16.36■□□□□ 0.21
PTCHD3-202ENST00000622555 VANGL1Q8TAA9 524 aaPredicted RBP16.36■□□□□ 0.21
PTCHD3-202ENST00000622555 IL1RAPQ9NPH3 570 aa16.36■□□□□ 0.21
PTCHD3-202ENST00000622555 SLC9A8Q9Y2E8 581 aa16.36■□□□□ 0.21
PTCHD3-202ENST00000622555 CHST2Q9Y4C5 530 aa16.36■□□□□ 0.21
PTCHD3-202ENST00000622555 DTNAQ9Y4J8 743 aa16.36■□□□□ 0.21
PTCHD3-202ENST00000622555 CPAMD8Q8IZJ3 1885 aa16.36■□□□□ 0.21
PTCHD3-202ENST00000622555 M0R3H8 397 aa16.36■□□□□ 0.21
PTCHD3-202ENST00000622555 EFSO43281 561 aa16.36■□□□□ 0.21
PTCHD3-202ENST00000622555 HNRNPRO43390 633 aaKnown RBP16.36■□□□□ 0.21
PTCHD3-202ENST00000622555 OR6B1O95007 311 aa16.36■□□□□ 0.21
PTCHD3-202ENST00000622555 VLDLRP98155 873 aa16.36■□□□□ 0.21
PTCHD3-202ENST00000622555 KCNC4Q03721 635 aa16.36■□□□□ 0.21
PTCHD3-202ENST00000622555 FGFBP1Q14512 234 aa16.36■□□□□ 0.21
PTCHD3-202ENST00000622555 NUP54Q7Z3B4 507 aa16.36■□□□□ 0.21
PTCHD3-202ENST00000622555 GALNT16Q8N428 558 aa16.36■□□□□ 0.21
PTCHD3-202ENST00000622555 APOBEC4Q8WW27 367 aaKnown RBP16.36■□□□□ 0.21
PTCHD3-202ENST00000622555 OIT3Q8WWZ8 545 aa16.36■□□□□ 0.21
PTCHD3-202ENST00000622555 HGDQ93099 445 aa16.36■□□□□ 0.21
PTCHD3-202ENST00000622555 TMCO6Q96DC7 493 aa16.36■□□□□ 0.21
PTCHD3-202ENST00000622555 ING2Q9H160 280 aa16.36■□□□□ 0.21
PTCHD3-202ENST00000622555 TEKT2Q9UIF3 430 aa16.36■□□□□ 0.21
PTCHD3-202ENST00000622555 RIMS3Q9UJD0 308 aa16.36■□□□□ 0.21
PTCHD3-202ENST00000622555 CDHR4A6H8M9 788 aa16.35■□□□□ 0.21
PTCHD3-202ENST00000622555 PRAMEF25A6NGN4 478 aa16.35■□□□□ 0.21
PTCHD3-202ENST00000622555 SERINC4A6NH21 518 aa16.35■□□□□ 0.21
PTCHD3-202ENST00000622555 IFNW1P05000 195 aa16.35■□□□□ 0.21
PTCHD3-202ENST00000622555 NGFRP08138 427 aa16.35■□□□□ 0.21
PTCHD3-202ENST00000622555 EVI2BP34910 448 aa16.35■□□□□ 0.21
PTCHD3-202ENST00000622555 MAGEA2P43356 314 aa16.35■□□□□ 0.21
PTCHD3-202ENST00000622555 NTRK2Q16620 822 aa16.35■□□□□ 0.21
PTCHD3-202ENST00000622555 ZNF791Q3KP31 576 aaPredicted RBP16.35■□□□□ 0.21
PTCHD3-202ENST00000622555 IL20RBQ6UXL0 311 aa16.35■□□□□ 0.21
PTCHD3-202ENST00000622555 GATSQ8NAP1 163 aa16.35■□□□□ 0.21
PTCHD3-202ENST00000622555 LRTOMTQ8WZ04 291 aa16.35■□□□□ 0.21
PTCHD3-202ENST00000622555 TTC9Q92623 222 aa16.35■□□□□ 0.21
PTCHD3-202ENST00000622555 GATA6Q92908 595 aa16.35■□□□□ 0.21
PTCHD3-202ENST00000622555 C7orf34Q96L11 122 aa16.35■□□□□ 0.21
PTCHD3-202ENST00000622555 NODALQ96S42 347 aa16.35■□□□□ 0.21
PTCHD3-202ENST00000622555 ARHGDIGQ99819 225 aa16.35■□□□□ 0.21
PTCHD3-202ENST00000622555 WFDC6Q9BQY6 131 aa16.35■□□□□ 0.21
PTCHD3-202ENST00000622555 TBL1XR1Q9BZK7 514 aa16.35■□□□□ 0.21
PTCHD3-202ENST00000622555 KLHL4Q9C0H6 718 aa16.35■□□□□ 0.21
PTCHD3-202ENST00000622555 VCX3BQ9H321 246 aa16.35■□□□□ 0.21
PTCHD3-202ENST00000622555 BATF3Q9NR55 127 aa16.35■□□□□ 0.21
PTCHD3-202ENST00000622555 EML6Q6ZMW3 1958 aa16.34■□□□□ 0.21
PTCHD3-202ENST00000622555 A6NL46 340 aa16.34■□□□□ 0.21
PTCHD3-202ENST00000622555 FRS3O43559 492 aa16.34■□□□□ 0.21
PTCHD3-202ENST00000622555 CSTAP01040 98 aa16.34■□□□□ 0.21
PTCHD3-202ENST00000622555 FCGR1AP12314 374 aa16.34■□□□□ 0.21
PTCHD3-202ENST00000622555 HOXD11P31277 338 aaPredicted RBP16.34■□□□□ 0.21
PTCHD3-202ENST00000622555 NRF1Q16656 503 aa16.34■□□□□ 0.21
PTCHD3-202ENST00000622555 DEFB109BQ30KR1 87 aa16.34■□□□□ 0.21
PTCHD3-202ENST00000622555 ABHD17BQ5VST6 288 aa16.34■□□□□ 0.21
PTCHD3-202ENST00000622555 IZUMO2Q6UXV1 221 aa16.34■□□□□ 0.21
PTCHD3-202ENST00000622555 APOOLQ6UXV4 268 aa16.34■□□□□ 0.21
PTCHD3-202ENST00000622555 LACC1Q8IV20 430 aa16.34■□□□□ 0.21
PTCHD3-202ENST00000622555 SPACA3Q8IXA5 215 aa16.34■□□□□ 0.21
PTCHD3-202ENST00000622555 CMIPQ8IY22 773 aa16.34■□□□□ 0.21
PTCHD3-202ENST00000622555 BEST3Q8N1M1 668 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms