RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 FAM151BQ6UXP7 276 aa7.03□□□□□ -1.28
TRIM49B-202ENST00000622138 USP30Q70CQ3 517 aa7.03□□□□□ -1.28
TRIM49B-202ENST00000622138 ZNF551Q7Z340 670 aaPredicted RBP7.03□□□□□ -1.28
TRIM49B-202ENST00000622138 VTCN1Q7Z7D3 282 aa7.03□□□□□ -1.28
TRIM49B-202ENST00000622138 TMEM173Q86WV6 379 aaPredicted RBP7.03□□□□□ -1.28
TRIM49B-202ENST00000622138 LGI4Q8N135 537 aa7.03□□□□□ -1.28
TRIM49B-202ENST00000622138 ZNF687Q8N1G0 1237 aa7.03□□□□□ -1.28
TRIM49B-202ENST00000622138 SYNPOQ8N3V7 929 aa7.03□□□□□ -1.28
TRIM49B-202ENST00000622138 CLDN19Q8N6F1 224 aa7.03□□□□□ -1.28
TRIM49B-202ENST00000622138 KDF1Q8NAX2 398 aaPredicted RBP7.03□□□□□ -1.28
TRIM49B-202ENST00000622138 DBF4BQ8NFT6 615 aa7.03□□□□□ -1.28
TRIM49B-202ENST00000622138 BEST4Q8NFU0 473 aa7.03□□□□□ -1.28
TRIM49B-202ENST00000622138 OR5J2Q8NH18 312 aa7.03□□□□□ -1.28
TRIM49B-202ENST00000622138 ZNF354BQ96LW1 612 aa7.03□□□□□ -1.28
TRIM49B-202ENST00000622138 OR52E6Q96RD3 313 aa7.03□□□□□ -1.28
TRIM49B-202ENST00000622138 SOX7Q9BT81 388 aa7.03□□□□□ -1.28
TRIM49B-202ENST00000622138 GGACTQ9BVM4 153 aa7.03□□□□□ -1.28
TRIM49B-202ENST00000622138 CACYBPQ9HB71 228 aaKnown RBP7.03□□□□□ -1.28
TRIM49B-202ENST00000622138 DUSP22Q9NRW4 184 aa7.03□□□□□ -1.28
TRIM49B-202ENST00000622138 MARCH5Q9NX47 278 aa7.03□□□□□ -1.28
TRIM49B-202ENST00000622138 WBP1LQ9NX94 342 aa7.03□□□□□ -1.28
TRIM49B-202ENST00000622138 DHCR7Q9UBM7 475 aaKnown RBP7.03□□□□□ -1.28
TRIM49B-202ENST00000622138 LHX3Q9UBR4 397 aa7.03□□□□□ -1.28
TRIM49B-202ENST00000622138 SLC9A8Q9Y2E8 581 aa7.03□□□□□ -1.28
TRIM49B-202ENST00000622138 DHRS7Q9Y394 339 aa7.03□□□□□ -1.28
TRIM49B-202ENST00000622138 SPIN1Q9Y657 262 aaPredicted RBP7.03□□□□□ -1.28
TRIM49B-202ENST00000622138 IRGMA1A4Y4 181 aa7.03□□□□□ -1.28
TRIM49B-202ENST00000622138 NPIPB9F8W1W9 429 aa7.03□□□□□ -1.28
TRIM49B-202ENST00000622138 M0R129 80 aa7.03□□□□□ -1.28
TRIM49B-202ENST00000622138 FPGTO14772 594 aa7.03□□□□□ -1.28
TRIM49B-202ENST00000622138 EEF1E1O43324 174 aaKnown RBP7.03□□□□□ -1.28
TRIM49B-202ENST00000622138 SMAD6O43541 496 aaKnown RBP7.03□□□□□ -1.28
TRIM49B-202ENST00000622138 ENTPD6O75354 484 aa7.03□□□□□ -1.28
TRIM49B-202ENST00000622138 AKR7A3O95154 331 aa7.03□□□□□ -1.28
TRIM49B-202ENST00000622138 LATS1O95835 1130 aa7.03□□□□□ -1.28
TRIM49B-202ENST00000622138 CRYABP02511 175 aaKnown RBP7.03□□□□□ -1.28
TRIM49B-202ENST00000622138 NR2F6P10588 404 aa7.03□□□□□ -1.28
TRIM49B-202ENST00000622138 IRF1P10914 325 aa7.03□□□□□ -1.28
TRIM49B-202ENST00000622138 SLC2A1P11166 492 aa7.03□□□□□ -1.28
TRIM49B-202ENST00000622138 RPA2P15927 270 aa7.03□□□□□ -1.28
TRIM49B-202ENST00000622138 ABOP16442 354 aa7.03□□□□□ -1.28
TRIM49B-202ENST00000622138 GJA1P17302 382 aa7.03□□□□□ -1.28
TRIM49B-202ENST00000622138 AGAP20933 346 aa7.03□□□□□ -1.28
TRIM49B-202ENST00000622138 HTR2AP28223 471 aa7.03□□□□□ -1.28
TRIM49B-202ENST00000622138 ABCD3P28288 659 aa7.03□□□□□ -1.28
TRIM49B-202ENST00000622138 MPGP29372 298 aa7.03□□□□□ -1.28
TRIM49B-202ENST00000622138 CDKN2CP42773 168 aa7.03□□□□□ -1.28
TRIM49B-202ENST00000622138 PTGER3P43115 390 aa7.03□□□□□ -1.28
TRIM49B-202ENST00000622138 CSNK1EP49674 416 aaKnown RBP7.03□□□□□ -1.28
TRIM49B-202ENST00000622138 WNT4P56705 351 aa7.03□□□□□ -1.28
TRIM49B-202ENST00000622138 CXADRP78310 365 aa7.03□□□□□ -1.28
TRIM49B-202ENST00000622138 VEZF1Q14119 521 aa7.03□□□□□ -1.28
TRIM49B-202ENST00000622138 PTGES3Q15185 160 aaKnown RBP7.03□□□□□ -1.28
TRIM49B-202ENST00000622138 IRF4Q15306 451 aa7.03□□□□□ -1.28
TRIM49B-202ENST00000622138 ZNF239Q16600 458 aaKnown RBP7.03□□□□□ -1.28
TRIM49B-202ENST00000622138 MINDY4Q4G0A6 757 aa7.03□□□□□ -1.28
TRIM49B-202ENST00000622138 THEM4Q5T1C6 240 aa7.03□□□□□ -1.28
TRIM49B-202ENST00000622138 RNF219Q5W0B1 726 aaPredicted RBP7.03□□□□□ -1.28
TRIM49B-202ENST00000622138 NCEH1Q6PIU2 408 aa7.03□□□□□ -1.28
TRIM49B-202ENST00000622138 PRSS55Q6UWB4 352 aaPredicted RBP7.03□□□□□ -1.28
TRIM49B-202ENST00000622138 TAS1R1Q7RTX1 841 aa7.03□□□□□ -1.28
TRIM49B-202ENST00000622138 MILR1Q7Z6M3 343 aa7.03□□□□□ -1.28
TRIM49B-202ENST00000622138 OAFQ86UD1 273 aa7.03□□□□□ -1.28
TRIM49B-202ENST00000622138 CPXM2Q8N436 756 aa7.03□□□□□ -1.28
TRIM49B-202ENST00000622138 OR10H5Q8NGA6 315 aa7.03□□□□□ -1.28
TRIM49B-202ENST00000622138 OR6K2Q8NGY2 324 aa7.03□□□□□ -1.28
TRIM49B-202ENST00000622138 SOCS4Q8WXH5 440 aa7.03□□□□□ -1.28
TRIM49B-202ENST00000622138 ASB13Q8WXK3 278 aa7.03□□□□□ -1.28
TRIM49B-202ENST00000622138 C1GALT1C1Q96EU7 318 aa7.03□□□□□ -1.28
TRIM49B-202ENST00000622138 LRR1Q96L50 414 aa7.03□□□□□ -1.28
TRIM49B-202ENST00000622138 NIPSNAP1Q9BPW8 284 aa7.03□□□□□ -1.28
TRIM49B-202ENST00000622138 GPR61Q9BZJ8 451 aa7.03□□□□□ -1.28
TRIM49B-202ENST00000622138 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.03□□□□□ -1.28
TRIM49B-202ENST00000622138 ZDHHC4Q9NPG8 344 aa7.03□□□□□ -1.28
TRIM49B-202ENST00000622138 IL17CQ9P0M4 197 aa7.03□□□□□ -1.28
TRIM49B-202ENST00000622138 ZNF629Q9UEG4 869 aaPredicted RBP7.03□□□□□ -1.28
TRIM49B-202ENST00000622138 DLGAP4Q9Y2H0 992 aa7.03□□□□□ -1.28
TRIM49B-202ENST00000622138 FCF1Q9Y324 198 aaKnown RBP7.03□□□□□ -1.28
TRIM49B-202ENST00000622138 SCN8AQ9UQD0 1980 aa7.03□□□□□ -1.28
TRIM49B-202ENST00000622138 A0A1W2PRB8 838 aa7.02□□□□□ -1.29
TRIM49B-202ENST00000622138 TMEM129A0AVI4 362 aa7.02□□□□□ -1.29
TRIM49B-202ENST00000622138 SMIM30A4D0T7 59 aa7.02□□□□□ -1.29
TRIM49B-202ENST00000622138 OR6C74A6NCV1 312 aa7.02□□□□□ -1.29
TRIM49B-202ENST00000622138 FAM86C2PA6NEL3 165 aa7.02□□□□□ -1.29
TRIM49B-202ENST00000622138 COLCA2A8K830 154 aa7.02□□□□□ -1.29
TRIM49B-202ENST00000622138 NEDD8-MDP1E9PL57 170 aa7.02□□□□□ -1.29
TRIM49B-202ENST00000622138 H7C0S8 307 aa7.02□□□□□ -1.29
TRIM49B-202ENST00000622138 GFYI3L273 518 aa7.02□□□□□ -1.29
TRIM49B-202ENST00000622138 MANBAO00462 879 aa7.02□□□□□ -1.29
TRIM49B-202ENST00000622138 COCHO43405 550 aa7.02□□□□□ -1.29
TRIM49B-202ENST00000622138 LY86O95711 162 aa7.02□□□□□ -1.29
TRIM49B-202ENST00000622138 OTCP00480 354 aa7.02□□□□□ -1.29
TRIM49B-202ENST00000622138 HPXP02790 462 aa7.02□□□□□ -1.29
TRIM49B-202ENST00000622138 SBK2P0C263 348 aa7.02□□□□□ -1.29
TRIM49B-202ENST00000622138 TFPIP10646 304 aa7.02□□□□□ -1.29
TRIM49B-202ENST00000622138 IFNGR1P15260 489 aa7.02□□□□□ -1.29
TRIM49B-202ENST00000622138 MGMTP16455 207 aa7.02□□□□□ -1.29
TRIM49B-202ENST00000622138 ADCYAP1P18509 176 aa7.02□□□□□ -1.29
TRIM49B-202ENST00000622138 RCC1P18754 421 aaPredicted RBP7.02□□□□□ -1.29
TRIM49B-202ENST00000622138 EPORP19235 508 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms