RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 METTL21AQ8WXB1 218 aa19.82■□□□□ 0.76
SPAST-204ENST00000621856 CNOT9Q92600 299 aaKnown RBP19.82■□□□□ 0.76
SPAST-204ENST00000621856 EFHD2Q96C19 240 aaPredicted RBP19.82■□□□□ 0.76
SPAST-204ENST00000621856 POLR2J2Q9GZM3 115 aaKnown RBP19.82■□□□□ 0.76
SPAST-204ENST00000621856 POLR2J3Q9H1A7 115 aaKnown RBP19.82■□□□□ 0.76
SPAST-204ENST00000621856 TESQ9UGI8 421 aaKnown RBP19.82■□□□□ 0.76
SPAST-204ENST00000621856 SLC7A7Q9UM01 511 aa19.82■□□□□ 0.76
SPAST-204ENST00000621856 NPIPB9F8W1W9 429 aa19.81■□□□□ 0.76
SPAST-204ENST00000621856 MEN1O00255 615 aa19.81■□□□□ 0.76
SPAST-204ENST00000621856 SLC1A7O00341 560 aa19.81■□□□□ 0.76
SPAST-204ENST00000621856 ALOX12BO75342 701 aa19.81■□□□□ 0.76
SPAST-204ENST00000621856 BCAS1O75363 584 aaPredicted RBP19.81■□□□□ 0.76
SPAST-204ENST00000621856 ANGPTL1O95841 491 aa19.81■□□□□ 0.76
SPAST-204ENST00000621856 DRD5P21918 477 aa19.81■□□□□ 0.76
SPAST-204ENST00000621856 MMP11P24347 488 aa19.81■□□□□ 0.76
SPAST-204ENST00000621856 CRHBPP24387 322 aa19.81■□□□□ 0.76
SPAST-204ENST00000621856 CRISP1P54107 249 aa19.81■□□□□ 0.76
SPAST-204ENST00000621856 EMP2P54851 167 aa19.81■□□□□ 0.76
SPAST-204ENST00000621856 DCAF7P61962 342 aa19.81■□□□□ 0.76
SPAST-204ENST00000621856 RBM44Q6ZP01 1051 aaKnown RBP19.81■□□□□ 0.76
SPAST-204ENST00000621856 SLC29A4Q7RTT9 530 aa19.81■□□□□ 0.76
SPAST-204ENST00000621856 ANKRD37Q7Z713 158 aa19.81■□□□□ 0.76
SPAST-204ENST00000621856 CCDC71Q8IV32 467 aaPredicted RBP19.81■□□□□ 0.76
SPAST-204ENST00000621856 ZSCAN1Q8NBB4 408 aa19.81■□□□□ 0.76
SPAST-204ENST00000621856 BPIFB6Q8NFQ5 453 aa19.81■□□□□ 0.76
SPAST-204ENST00000621856 OR1N1Q8NGS0 311 aa19.81■□□□□ 0.76
SPAST-204ENST00000621856 LMF1Q96S06 567 aa19.81■□□□□ 0.76
SPAST-204ENST00000621856 RASSF1Q9NS23 344 aa19.81■□□□□ 0.76
SPAST-204ENST00000621856 AKAP7Q9P0M2 348 aaPredicted RBP19.81■□□□□ 0.76
SPAST-204ENST00000621856 AASSQ9UDR5 926 aa19.81■□□□□ 0.76
SPAST-204ENST00000621856 MRTO4Q9UKD2 239 aaKnown RBP19.81■□□□□ 0.76
SPAST-204ENST00000621856 TTC28Q96AY4 2481 aa19.81■□□□□ 0.76
SPAST-204ENST00000621856 VPS13AQ96RL7 3174 aa19.81■□□□□ 0.76
SPAST-204ENST00000621856 IGHV3-20A0A0C4DH32 117 aa19.8■□□□□ 0.76
SPAST-204ENST00000621856 TRAPPC13A5PLN9 417 aa19.8■□□□□ 0.76
SPAST-204ENST00000621856 CDX4O14627 284 aaPredicted RBP19.8■□□□□ 0.76
SPAST-204ENST00000621856 FMO6PO60774 539 aa19.8■□□□□ 0.76
SPAST-204ENST00000621856 LINGO3P0C6S8 592 aa19.8■□□□□ 0.76
SPAST-204ENST00000621856 ZNF806P0C7X5 589 aa19.8■□□□□ 0.76
SPAST-204ENST00000621856 CD59P13987 128 aa19.8■□□□□ 0.76
SPAST-204ENST00000621856 CHMP24386 653 aa19.8■□□□□ 0.76
SPAST-204ENST00000621856 HTR2AP28223 471 aa19.8■□□□□ 0.76
SPAST-204ENST00000621856 FMO3P31513 532 aa19.8■□□□□ 0.76
SPAST-204ENST00000621856 IDH2P48735 452 aaKnown RBP19.8■□□□□ 0.76
SPAST-204ENST00000621856 FGFBP1Q14512 234 aa19.8■□□□□ 0.76
SPAST-204ENST00000621856 EBPQ15125 230 aaKnown RBP19.8■□□□□ 0.76
SPAST-204ENST00000621856 PTGES3Q15185 160 aaKnown RBP19.8■□□□□ 0.76
SPAST-204ENST00000621856 OR1Q1Q15612 314 aa19.8■□□□□ 0.76
SPAST-204ENST00000621856 ZSWIM7Q19AV6 140 aa19.8■□□□□ 0.76
SPAST-204ENST00000621856 LAIR2Q6ISS4 152 aa19.8■□□□□ 0.76
SPAST-204ENST00000621856 ZER1Q7Z7L7 766 aa19.8■□□□□ 0.76
SPAST-204ENST00000621856 NKAIN4Q8IVV8 208 aa19.8■□□□□ 0.76
SPAST-204ENST00000621856 NAXDQ8IW45 347 aa19.8■□□□□ 0.76
SPAST-204ENST00000621856 C9orf40Q8IXQ3 194 aa19.8■□□□□ 0.76
SPAST-204ENST00000621856 NLGN4XQ8N0W4 816 aa19.8■□□□□ 0.76
SPAST-204ENST00000621856 DEPDC4Q8N2C3 294 aa19.8■□□□□ 0.76
SPAST-204ENST00000621856 GNPDA2Q8TDQ7 276 aa19.8■□□□□ 0.76
SPAST-204ENST00000621856 ADIPOR1Q96A54 375 aa19.8■□□□□ 0.76
SPAST-204ENST00000621856 ZNF559Q9BR84 538 aa19.8■□□□□ 0.76
SPAST-204ENST00000621856 FAM192AQ9GZU8 254 aa19.8■□□□□ 0.76
SPAST-204ENST00000621856 REV1Q9UBZ9 1251 aa19.8■□□□□ 0.76
SPAST-204ENST00000621856 VSTM2BA6NLU5 285 aa19.79■□□□□ 0.76
SPAST-204ENST00000621856 OR6C76A6NM76 312 aa19.79■□□□□ 0.76
SPAST-204ENST00000621856 SOX14O95416 240 aa19.79■□□□□ 0.76
SPAST-204ENST00000621856 IL33O95760 270 aa19.79■□□□□ 0.76
SPAST-204ENST00000621856 THY1P04216 161 aa19.79■□□□□ 0.76
SPAST-204ENST00000621856 ZNF28P17035 718 aa19.79■□□□□ 0.76
SPAST-204ENST00000621856 LSM11P83369 360 aaKnown RBP eCLIP19.79■□□□□ 0.76
SPAST-204ENST00000621856 NADK2Q4G0N4 442 aa19.79■□□□□ 0.76
SPAST-204ENST00000621856 LCN10Q6JVE6 187 aa19.79■□□□□ 0.76
SPAST-204ENST00000621856 C1orf94Q6P1W5 598 aa19.79■□□□□ 0.76
SPAST-204ENST00000621856 GRAMD2AQ8IUY3 354 aa19.79■□□□□ 0.76
SPAST-204ENST00000621856 ENTHD1Q8IYW4 607 aa19.79■□□□□ 0.76
SPAST-204ENST00000621856 TOR1AIP2Q8NFQ8 470 aa19.79■□□□□ 0.76
SPAST-204ENST00000621856 PIGXQ8TBF5 258 aa19.79■□□□□ 0.76
SPAST-204ENST00000621856 RNF217Q8TC41 542 aa19.79■□□□□ 0.76
SPAST-204ENST00000621856 ACOT11Q8WXI4 607 aaPredicted RBP19.79■□□□□ 0.76
SPAST-204ENST00000621856 UBE2FQ969M7 185 aa19.79■□□□□ 0.76
SPAST-204ENST00000621856 EDEM2Q9BV94 578 aa19.79■□□□□ 0.76
SPAST-204ENST00000621856 FBXO8Q9NRD0 319 aa19.79■□□□□ 0.76
SPAST-204ENST00000621856 IMPAD1Q9NX62 359 aa19.79■□□□□ 0.76
SPAST-204ENST00000621856 DNAJB12Q9NXW2 375 aaKnown RBP19.79■□□□□ 0.76
SPAST-204ENST00000621856 SLC39A1Q9NY26 324 aa19.79■□□□□ 0.76
SPAST-204ENST00000621856 GPN3Q9UHW5 284 aaPredicted RBP19.79■□□□□ 0.76
SPAST-204ENST00000621856 RNF6Q9Y252 685 aa19.79■□□□□ 0.76
SPAST-204ENST00000621856 TRIM64CA6NLI5 447 aa19.79■□□□□ 0.76
SPAST-204ENST00000621856 H3BN98 237 aa19.79■□□□□ 0.76
SPAST-204ENST00000621856 GABARAPL2P60520 117 aa19.79■□□□□ 0.76
SPAST-204ENST00000621856 PLAURQ03405 335 aa19.79■□□□□ 0.76
SPAST-204ENST00000621856 COX10Q12887 443 aa19.79■□□□□ 0.76
SPAST-204ENST00000621856 TMEM236Q5W0B7 351 aa19.79■□□□□ 0.76
SPAST-204ENST00000621856 PRICKLE2Q7Z3G6 844 aa19.79■□□□□ 0.76
SPAST-204ENST00000621856 CMIPQ8IY22 773 aa19.79■□□□□ 0.76
SPAST-204ENST00000621856 OR4C3Q8NH37 302 aa19.79■□□□□ 0.76
SPAST-204ENST00000621856 CRB3Q9BUF7 120 aa19.79■□□□□ 0.76
SPAST-204ENST00000621856 NRSN2Q9GZP1 204 aa19.79■□□□□ 0.76
SPAST-204ENST00000621856 WWTR1Q9GZV5 400 aa19.79■□□□□ 0.76
SPAST-204ENST00000621856 HOXD1Q9GZZ0 328 aa19.79■□□□□ 0.76
SPAST-204ENST00000621856 TMEM27Q9HBJ8 222 aa19.79■□□□□ 0.76
SPAST-204ENST00000621856 SERINC4A6NH21 518 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms