RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 TTC23Q5W5X9 447 aa9.74□□□□□ -0.85
VPS11-208ENST00000621676 WDR88Q6ZMY6 472 aa9.74□□□□□ -0.85
VPS11-208ENST00000621676 PPP1R3BQ86XI6 285 aa9.74□□□□□ -0.85
VPS11-208ENST00000621676 DUSP19Q8WTR2 217 aa9.74□□□□□ -0.85
VPS11-208ENST00000621676 ZNF524Q96C55 264 aa9.74□□□□□ -0.85
VPS11-208ENST00000621676 SAMD8Q96LT4 415 aa9.74□□□□□ -0.85
VPS11-208ENST00000621676 NR1H4Q96RI1 486 aaPredicted RBP9.74□□□□□ -0.85
VPS11-208ENST00000621676 TSSK6Q9BXA6 273 aa9.74□□□□□ -0.85
VPS11-208ENST00000621676 ANKRD60Q9BZ19 345 aa9.74□□□□□ -0.85
VPS11-208ENST00000621676 FN3KQ9H479 309 aa9.74□□□□□ -0.85
VPS11-208ENST00000621676 SLC22A11Q9NSA0 550 aa9.74□□□□□ -0.85
VPS11-208ENST00000621676 SEC14L4Q9UDX3 406 aa9.74□□□□□ -0.85
VPS11-208ENST00000621676 CLEC2DQ9UHP7 191 aa9.74□□□□□ -0.85
VPS11-208ENST00000621676 A4GNTQ9UNA3 340 aa9.74□□□□□ -0.85
VPS11-208ENST00000621676 FER1L5A0AVI2 2057 aa9.74□□□□□ -0.85
VPS11-208ENST00000621676 A0A1W2PPK0 400 aa9.74□□□□□ -0.85
VPS11-208ENST00000621676 ABCB7O75027 752 aa9.74□□□□□ -0.85
VPS11-208ENST00000621676 F13BP05160 661 aa9.74□□□□□ -0.85
VPS11-208ENST00000621676 ZNF182P17025 639 aaPredicted RBP9.74□□□□□ -0.85
VPS11-208ENST00000621676 RPL4P36578 427 aaKnown RBP9.74□□□□□ -0.85
VPS11-208ENST00000621676 PCBP3P57721 371 aaKnown RBP9.74□□□□□ -0.85
VPS11-208ENST00000621676 PRTGQ2VWP7 1150 aa9.74□□□□□ -0.85
VPS11-208ENST00000621676 RFX4Q33E94 735 aa9.74□□□□□ -0.85
VPS11-208ENST00000621676 CNPY1Q3B7I2 92 aa9.74□□□□□ -0.85
VPS11-208ENST00000621676 IQCCQ4KMZ1 466 aa9.74□□□□□ -0.85
VPS11-208ENST00000621676 ZNF628Q5EBL2 1059 aa9.74□□□□□ -0.85
VPS11-208ENST00000621676 ZNF605Q86T29 641 aa9.74□□□□□ -0.85
VPS11-208ENST00000621676 BBS1Q8NFJ9 593 aa9.74□□□□□ -0.85
VPS11-208ENST00000621676 OR13C2Q8NGS9 318 aa9.74□□□□□ -0.85
VPS11-208ENST00000621676 GOT1L1Q8NHS2 421 aaPredicted RBP9.74□□□□□ -0.85
VPS11-208ENST00000621676 NT5DC2Q9H857 520 aa9.74□□□□□ -0.85
VPS11-208ENST00000621676 ADAM29Q9UKF5 820 aa9.74□□□□□ -0.85
VPS11-208ENST00000621676 RNF6Q9Y252 685 aa9.74□□□□□ -0.85
VPS11-208ENST00000621676 MRPS18BQ9Y676 258 aaKnown RBP9.74□□□□□ -0.85
VPS11-208ENST00000621676 C2orf92A0A1B0GVN3 265 aa9.74□□□□□ -0.85
VPS11-208ENST00000621676 SP9P0CG40 484 aa9.74□□□□□ -0.85
VPS11-208ENST00000621676 FBXW4P57775 412 aa9.74□□□□□ -0.85
VPS11-208ENST00000621676 VBP1P61758 197 aa9.74□□□□□ -0.85
VPS11-208ENST00000621676 ESRRGP62508 458 aa9.74□□□□□ -0.85
VPS11-208ENST00000621676 CASP12Q6UXS9 341 aa9.74□□□□□ -0.85
VPS11-208ENST00000621676 GPR141Q7Z602 305 aa9.74□□□□□ -0.85
VPS11-208ENST00000621676 ENTHD1Q8IYW4 607 aa9.74□□□□□ -0.85
VPS11-208ENST00000621676 NLGN4YQ8NFZ3 816 aaPredicted RBP9.74□□□□□ -0.85
VPS11-208ENST00000621676 SLC2A12Q8TD20 617 aa9.74□□□□□ -0.85
VPS11-208ENST00000621676 PLEKHA8Q96JA3 519 aa9.74□□□□□ -0.85
VPS11-208ENST00000621676 TSSK2Q96PF2 358 aa9.74□□□□□ -0.85
VPS11-208ENST00000621676 LHPPQ9H008 270 aa9.74□□□□□ -0.85
VPS11-208ENST00000621676 MUC13Q9H3R2 512 aa9.74□□□□□ -0.85
VPS11-208ENST00000621676 TMEM38AQ9H6F2 299 aa9.74□□□□□ -0.85
VPS11-208ENST00000621676 Q9N2J8 555 aa9.74□□□□□ -0.85
VPS11-208ENST00000621676 ZNF443Q9Y2A4 671 aaPredicted RBP9.74□□□□□ -0.85
VPS11-208ENST00000621676 ADAM18Q9Y3Q7 739 aa9.74□□□□□ -0.85
VPS11-208ENST00000621676 TMEM131Q92545 1883 aa9.73□□□□□ -0.85
VPS11-208ENST00000621676 ZNF106Q9H2Y7 1883 aaKnown RBP9.73□□□□□ -0.85
VPS11-208ENST00000621676 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.73□□□□□ -0.85
VPS11-208ENST00000621676 MEN1O00255 615 aa9.73□□□□□ -0.85
VPS11-208ENST00000621676 SLC1A7O00341 560 aa9.73□□□□□ -0.85
VPS11-208ENST00000621676 CTNSO60931 367 aa9.73□□□□□ -0.85
VPS11-208ENST00000621676 ENTPD6O75354 484 aa9.73□□□□□ -0.85
VPS11-208ENST00000621676 RFPL3O75679 317 aa9.73□□□□□ -0.85
VPS11-208ENST00000621676 PABPC4LP0CB38 370 aaKnown RBP9.73□□□□□ -0.85
VPS11-208ENST00000621676 SMIM10L1P0DMW3 83 aa9.73□□□□□ -0.85
VPS11-208ENST00000621676 ETV5P41161 510 aa9.73□□□□□ -0.85
VPS11-208ENST00000621676 RPL5P46777 297 aaKnown RBP9.73□□□□□ -0.85
VPS11-208ENST00000621676 UGT2B15P54855 530 aa9.73□□□□□ -0.85
VPS11-208ENST00000621676 ADARB1P78563 741 aaKnown RBP9.73□□□□□ -0.85
VPS11-208ENST00000621676 ZNF33BQ06732 778 aa9.73□□□□□ -0.85
VPS11-208ENST00000621676 ATP1A1-AS1Q5TC04 95 aa9.73□□□□□ -0.85
VPS11-208ENST00000621676 IL20RBQ6UXL0 311 aa9.73□□□□□ -0.85
VPS11-208ENST00000621676 PAPD5Q8NDF8 572 aaKnown RBP9.73□□□□□ -0.85
VPS11-208ENST00000621676 NT5CQ8TCD5 201 aa9.73□□□□□ -0.85
VPS11-208ENST00000621676 PTPMT1Q8WUK0 201 aaPredicted RBP9.73□□□□□ -0.85
VPS11-208ENST00000621676 METTL21AQ8WXB1 218 aa9.73□□□□□ -0.85
VPS11-208ENST00000621676 SLC41A3Q96GZ6 507 aa9.73□□□□□ -0.85
VPS11-208ENST00000621676 MSANTD3Q96H12 275 aa9.73□□□□□ -0.85
VPS11-208ENST00000621676 SMIM10Q96HG1 83 aa9.73□□□□□ -0.85
VPS11-208ENST00000621676 OR11A1Q9GZK7 315 aa9.73□□□□□ -0.85
VPS11-208ENST00000621676 PCDHGA6Q9Y5G7 932 aa9.73□□□□□ -0.85
VPS11-208ENST00000621676 THY1P04216 161 aa9.73□□□□□ -0.85
VPS11-208ENST00000621676 ZGLP1P0C6A0 271 aa9.73□□□□□ -0.85
VPS11-208ENST00000621676 JMJD7P0C870 316 aa9.73□□□□□ -0.85
VPS11-208ENST00000621676 RHCEP18577 417 aa9.73□□□□□ -0.85
VPS11-208ENST00000621676 ISL1P61371 349 aa9.73□□□□□ -0.85
VPS11-208ENST00000621676 RAB39AQ14964 217 aa9.73□□□□□ -0.85
VPS11-208ENST00000621676 DMRTC1Q5HYR2 192 aa9.73□□□□□ -0.85
VPS11-208ENST00000621676 ALG10BQ5I7T1 473 aa9.73□□□□□ -0.85
VPS11-208ENST00000621676 LAIR2Q6ISS4 152 aa9.73□□□□□ -0.85
VPS11-208ENST00000621676 APLFQ8IW19 511 aaPredicted RBP9.73□□□□□ -0.85
VPS11-208ENST00000621676 CHCHD4Q8N4Q1 142 aa9.73□□□□□ -0.85
VPS11-208ENST00000621676 OR4C6Q8NH72 309 aa9.73□□□□□ -0.85
VPS11-208ENST00000621676 DNAJB8Q8NHS0 232 aa9.73□□□□□ -0.85
VPS11-208ENST00000621676 SLC38A4Q969I6 547 aa9.73□□□□□ -0.85
VPS11-208ENST00000621676 ZNF501Q96CX3 271 aaPredicted RBP9.73□□□□□ -0.85
VPS11-208ENST00000621676 NODALQ96S42 347 aa9.73□□□□□ -0.85
VPS11-208ENST00000621676 COPS4Q9BT78 406 aa9.73□□□□□ -0.85
VPS11-208ENST00000621676 RPS6KB2Q9UBS0 482 aa9.73□□□□□ -0.85
VPS11-208ENST00000621676 C19orf53Q9UNZ5 99 aaPredicted RBP9.73□□□□□ -0.85
VPS11-208ENST00000621676 PHF3Q92576 2039 aaKnown RBP9.73□□□□□ -0.85
VPS11-208ENST00000621676 ICOSLGO75144 302 aa9.72□□□□□ -0.85
VPS11-208ENST00000621676 CT45A8P0DMV1 189 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms