RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 MISPQ8IVT2 679 aa16.63■□□□□ 0.25
LITAF-220ENST00000620789 TSPEARQ8WU66 669 aa16.63■□□□□ 0.25
LITAF-220ENST00000620789 SARAFQ96BY9 339 aa16.63■□□□□ 0.25
LITAF-220ENST00000620789 ROPN1LQ96C74 230 aa16.63■□□□□ 0.25
LITAF-220ENST00000620789 NMUR2Q9GZQ4 415 aa16.63■□□□□ 0.25
LITAF-220ENST00000620789 DSN1Q9H410 356 aa16.63■□□□□ 0.25
LITAF-220ENST00000620789 POLE3Q9NRF9 147 aa16.63■□□□□ 0.25
LITAF-220ENST00000620789 MED11Q9P086 117 aa16.63■□□□□ 0.25
LITAF-220ENST00000620789 TNFRSF10DQ9UBN6 386 aa16.63■□□□□ 0.25
LITAF-220ENST00000620789 MRPS18CQ9Y3D5 142 aaKnown RBP16.63■□□□□ 0.25
LITAF-220ENST00000620789 DNAJC13O75165 2243 aa16.62■□□□□ 0.25
LITAF-220ENST00000620789 PRAMEF27A3QJZ7 478 aa16.62■□□□□ 0.25
LITAF-220ENST00000620789 DPP4P27487 766 aa16.62■□□□□ 0.25
LITAF-220ENST00000620789 DSCR4P56555 118 aaPredicted RBP16.62■□□□□ 0.25
LITAF-220ENST00000620789 GTF3C1Q12789 2109 aa16.62■□□□□ 0.25
LITAF-220ENST00000620789 GPR68Q15743 365 aa16.62■□□□□ 0.25
LITAF-220ENST00000620789 CD226Q15762 336 aa16.62■□□□□ 0.25
LITAF-220ENST00000620789 KLHL26Q53HC5 615 aa16.62■□□□□ 0.25
LITAF-220ENST00000620789 AP1ARQ63HQ0 302 aa16.62■□□□□ 0.25
LITAF-220ENST00000620789 OLIG3Q7RTU3 272 aa16.62■□□□□ 0.25
LITAF-220ENST00000620789 GATSQ8NAP1 163 aa16.62■□□□□ 0.25
LITAF-220ENST00000620789 OR14L1PQ8NHC6 308 aa16.62■□□□□ 0.25
LITAF-220ENST00000620789 PTGES2Q9H7Z7 377 aa16.62■□□□□ 0.25
LITAF-220ENST00000620789 SAR1AQ9NR31 198 aa16.62■□□□□ 0.25
LITAF-220ENST00000620789 TAS2R10Q9NYW0 307 aa16.62■□□□□ 0.25
LITAF-220ENST00000620789 SLC25A37Q9NYZ2 338 aa16.62■□□□□ 0.25
LITAF-220ENST00000620789 SLAMF8Q9P0V8 285 aa16.62■□□□□ 0.25
LITAF-220ENST00000620789 LEF1Q9UJU2 399 aaPredicted RBP16.62■□□□□ 0.25
LITAF-220ENST00000620789 DKKL1Q9UK85 242 aa16.62■□□□□ 0.25
LITAF-220ENST00000620789 ACAD8Q9UKU7 415 aa16.62■□□□□ 0.25
LITAF-220ENST00000620789 MKLN1Q9UL63 735 aa16.62■□□□□ 0.25
LITAF-220ENST00000620789 LIPT1Q9Y234 373 aa16.62■□□□□ 0.25
LITAF-220ENST00000620789 SLC6A5Q9Y345 797 aa16.62■□□□□ 0.25
LITAF-220ENST00000620789 NDUFAF1Q9Y375 327 aa16.62■□□□□ 0.25
LITAF-220ENST00000620789 WDR45Q9Y484 360 aa16.62■□□□□ 0.25
LITAF-220ENST00000620789 C15orf38-AP3S2A0A0A6YYH1 394 aa16.61■□□□□ 0.25
LITAF-220ENST00000620789 CLIC1O00299 241 aa16.61■□□□□ 0.25
LITAF-220ENST00000620789 CCL21O00585 134 aa16.61■□□□□ 0.25
LITAF-220ENST00000620789 ANGPT2O15123 496 aa16.61■□□□□ 0.25
LITAF-220ENST00000620789 KIAA0513O60268 411 aa16.61■□□□□ 0.25
LITAF-220ENST00000620789 ZIC2O95409 532 aaPredicted RBP16.61■□□□□ 0.25
LITAF-220ENST00000620789 SNRPB2P08579 225 aaKnown RBP16.61■□□□□ 0.25
LITAF-220ENST00000620789 ETFAP13804 333 aa16.61■□□□□ 0.25
LITAF-220ENST00000620789 CRATP43155 626 aa16.61■□□□□ 0.25
LITAF-220ENST00000620789 HPCAP84074 193 aa16.61■□□□□ 0.25
LITAF-220ENST00000620789 GANABQ14697 944 aaKnown RBP16.61■□□□□ 0.25
LITAF-220ENST00000620789 SYPL1Q16563 259 aa16.61■□□□□ 0.25
LITAF-220ENST00000620789 GXYLT1Q4G148 440 aa16.61■□□□□ 0.25
LITAF-220ENST00000620789 GPAT3Q53EU6 434 aa16.61■□□□□ 0.25
LITAF-220ENST00000620789 NHSL2Q5HYW2 709 aa16.61■□□□□ 0.25
LITAF-220ENST00000620789 EMC4Q5J8M3 183 aa16.61■□□□□ 0.25
LITAF-220ENST00000620789 TYW3Q6IPR3 259 aaKnown RBP16.61■□□□□ 0.25
LITAF-220ENST00000620789 SPATA21Q7Z572 469 aa16.61■□□□□ 0.25
LITAF-220ENST00000620789 MTERF4Q7Z6M4 381 aaKnown RBP16.61■□□□□ 0.25
LITAF-220ENST00000620789 MSRB3Q8IXL7 192 aa16.61■□□□□ 0.25
LITAF-220ENST00000620789 TRNT1Q96Q11 434 aaKnown RBP16.61■□□□□ 0.25
LITAF-220ENST00000620789 SAP130Q9H0E3 1048 aa16.61■□□□□ 0.25
LITAF-220ENST00000620789 NSRP1Q9H0G5 558 aaKnown RBP16.61■□□□□ 0.25
LITAF-220ENST00000620789 RAD21L1Q9H4I0 556 aa16.61■□□□□ 0.25
LITAF-220ENST00000620789 PNPLA3Q9NST1 481 aa16.61■□□□□ 0.25
LITAF-220ENST00000620789 KCNE5Q9UJ90 142 aa16.61■□□□□ 0.25
LITAF-220ENST00000620789 DTNAQ9Y4J8 743 aa16.61■□□□□ 0.25
LITAF-220ENST00000620789 FREM3P0C091 2139 aa16.61■□□□□ 0.25
LITAF-220ENST00000620789 TRBV5-3A0A0A0MS03 114 aa16.6■□□□□ 0.25
LITAF-220ENST00000620789 H3BNH8 94 aa16.6■□□□□ 0.25
LITAF-220ENST00000620789 ZIC3O60481 467 aa16.6■□□□□ 0.25
LITAF-220ENST00000620789 UGT2B17O75795 530 aa16.6■□□□□ 0.25
LITAF-220ENST00000620789 H6PDO95479 791 aa16.6■□□□□ 0.25
LITAF-220ENST00000620789 LDLRP01130 860 aa16.6■□□□□ 0.25
LITAF-220ENST00000620789 MSX1P28360 303 aa16.6■□□□□ 0.25
LITAF-220ENST00000620789 GCKP35557 465 aa16.6■□□□□ 0.25
LITAF-220ENST00000620789 PER3P56645 1201 aa16.6■□□□□ 0.25
LITAF-220ENST00000620789 DSTNP60981 165 aa16.6■□□□□ 0.25
LITAF-220ENST00000620789 GNGT1P63211 74 aa16.6■□□□□ 0.25
LITAF-220ENST00000620789 CRYZQ08257 329 aaKnown RBP16.6■□□□□ 0.25
LITAF-220ENST00000620789 KLF10Q13118 480 aa16.6■□□□□ 0.25
LITAF-220ENST00000620789 RGNQ15493 299 aa16.6■□□□□ 0.25
LITAF-220ENST00000620789 ZNF141Q15928 474 aa16.6■□□□□ 0.25
LITAF-220ENST00000620789 ZNF630Q2M218 657 aaPredicted RBP16.6■□□□□ 0.25
LITAF-220ENST00000620789 PDZK1Q5T2W1 519 aa16.6■□□□□ 0.25
LITAF-220ENST00000620789 WLSQ5T9L3 541 aa16.6■□□□□ 0.25
LITAF-220ENST00000620789 VASNQ6EMK4 673 aa16.6■□□□□ 0.25
LITAF-220ENST00000620789 DLEU7Q6UYE1 221 aa16.6■□□□□ 0.25
LITAF-220ENST00000620789 FRRS1Q6ZNA5 592 aa16.6■□□□□ 0.25
LITAF-220ENST00000620789 IFNEQ86WN2 208 aa16.6■□□□□ 0.25
LITAF-220ENST00000620789 ZNF619Q8N2I2 560 aa16.6■□□□□ 0.25
LITAF-220ENST00000620789 DPP10Q8N608 796 aa16.6■□□□□ 0.25
LITAF-220ENST00000620789 ZNF614Q8N883 585 aa16.6■□□□□ 0.25
LITAF-220ENST00000620789 ANKFN1Q8N957 763 aa16.6■□□□□ 0.25
LITAF-220ENST00000620789 OR5M9Q8NGP3 310 aa16.6■□□□□ 0.25
LITAF-220ENST00000620789 PHOSPHO1Q8TCT1 267 aa16.6■□□□□ 0.25
LITAF-220ENST00000620789 SSC4DQ8WTU2 575 aa16.6■□□□□ 0.25
LITAF-220ENST00000620789 OIT3Q8WWZ8 545 aa16.6■□□□□ 0.25
LITAF-220ENST00000620789 C1GALT1C1Q96EU7 318 aa16.6■□□□□ 0.25
LITAF-220ENST00000620789 ELAC2Q9BQ52 826 aaKnown RBP16.6■□□□□ 0.25
LITAF-220ENST00000620789 TP63Q9H3D4 680 aaPredicted RBP16.6■□□□□ 0.25
LITAF-220ENST00000620789 THUMPD1Q9NXG2 353 aaKnown RBP16.6■□□□□ 0.25
LITAF-220ENST00000620789 VAPAQ9P0L0 249 aa16.6■□□□□ 0.25
LITAF-220ENST00000620789 P2RX2Q9UBL9 471 aa16.6■□□□□ 0.25
LITAF-220ENST00000620789 MEMO1Q9Y316 297 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms