RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 ZNF561Q8N587 486 aa9.72□□□□□ -0.85
VPS11-207ENST00000620429 PCSK9Q8NBP7 692 aaKnown RBP9.72□□□□□ -0.85
VPS11-207ENST00000620429 CHST14Q8NCH0 376 aa9.72□□□□□ -0.85
VPS11-207ENST00000620429 PIH1D2Q8WWB5 315 aa9.72□□□□□ -0.85
VPS11-207ENST00000620429 VOPP1Q96AW1 172 aa9.72□□□□□ -0.85
VPS11-207ENST00000620429 CHFRQ96EP1 664 aa9.72□□□□□ -0.85
VPS11-207ENST00000620429 ADAT1Q9BUB4 502 aaKnown RBP9.72□□□□□ -0.85
VPS11-207ENST00000620429 NDOR1Q9UHB4 597 aa9.72□□□□□ -0.85
VPS11-207ENST00000620429 PCDHB8Q9UN66 801 aa9.72□□□□□ -0.85
VPS11-207ENST00000620429 IGLV3-10A0A075B6K4 115 aa9.72□□□□□ -0.85
VPS11-207ENST00000620429 A0A1B0GUH1 482 aa9.72□□□□□ -0.85
VPS11-207ENST00000620429 A0A1W2PRQ8 180 aa9.72□□□□□ -0.85
VPS11-207ENST00000620429 ARPC5O15511 151 aa9.72□□□□□ -0.85
VPS11-207ENST00000620429 PPIHO43447 177 aaKnown RBP9.72□□□□□ -0.85
VPS11-207ENST00000620429 LATS1O95835 1130 aa9.72□□□□□ -0.85
VPS11-207ENST00000620429 OR8U8P0C7N1 319 aa9.72□□□□□ -0.85
VPS11-207ENST00000620429 UQCRC2P22695 453 aa9.72□□□□□ -0.85
VPS11-207ENST00000620429 ABCD3P28288 659 aa9.72□□□□□ -0.85
VPS11-207ENST00000620429 MPGP29372 298 aa9.72□□□□□ -0.85
VPS11-207ENST00000620429 CNR2P34972 360 aa9.72□□□□□ -0.85
VPS11-207ENST00000620429 CCR6P51684 374 aa9.72□□□□□ -0.85
VPS11-207ENST00000620429 SLC14A1Q13336 389 aa9.72□□□□□ -0.85
VPS11-207ENST00000620429 PEA15Q15121 130 aa9.72□□□□□ -0.85
VPS11-207ENST00000620429 ZSWIM7Q19AV6 140 aa9.72□□□□□ -0.85
VPS11-207ENST00000620429 MPPE1Q53F39 396 aa9.72□□□□□ -0.85
VPS11-207ENST00000620429 AADACL4Q5VUY2 407 aa9.72□□□□□ -0.85
VPS11-207ENST00000620429 SLC22A10Q63ZE4 541 aa9.72□□□□□ -0.85
VPS11-207ENST00000620429 PRICKLE2Q7Z3G6 844 aa9.72□□□□□ -0.85
VPS11-207ENST00000620429 TSEN54Q7Z6J9 526 aaKnown RBP9.72□□□□□ -0.85
VPS11-207ENST00000620429 MON1AQ86VX9 555 aa9.72□□□□□ -0.85
VPS11-207ENST00000620429 GPR135Q8IZ08 494 aa9.72□□□□□ -0.85
VPS11-207ENST00000620429 LGI4Q8N135 537 aa9.72□□□□□ -0.85
VPS11-207ENST00000620429 KDF1Q8NAX2 398 aaPredicted RBP9.72□□□□□ -0.85
VPS11-207ENST00000620429 DBF4BQ8NFT6 615 aa9.72□□□□□ -0.85
VPS11-207ENST00000620429 SNX33Q8WV41 574 aa9.72□□□□□ -0.85
VPS11-207ENST00000620429 ZC3H10Q96K80 434 aaKnown RBP9.72□□□□□ -0.85
VPS11-207ENST00000620429 LRR1Q96L50 414 aa9.72□□□□□ -0.85
VPS11-207ENST00000620429 C20orf85Q9H1P6 137 aa9.72□□□□□ -0.85
VPS11-207ENST00000620429 RERGLQ9H628 205 aa9.72□□□□□ -0.85
VPS11-207ENST00000620429 ASIC5Q9NY37 505 aa9.72□□□□□ -0.85
VPS11-207ENST00000620429 FBXL3Q9UKT7 428 aa9.72□□□□□ -0.85
VPS11-207ENST00000620429 CBLCQ9ULV8 474 aa9.72□□□□□ -0.85
VPS11-207ENST00000620429 NLRC5Q86WI3 1866 aa9.71□□□□□ -0.85
VPS11-207ENST00000620429 LRIT2A6NDA9 550 aa9.71□□□□□ -0.85
VPS11-207ENST00000620429 NEDD8-MDP1E9PL57 170 aa9.71□□□□□ -0.85
VPS11-207ENST00000620429 GFYI3L273 518 aa9.71□□□□□ -0.85
VPS11-207ENST00000620429 RFXAPO00287 272 aa9.71□□□□□ -0.85
VPS11-207ENST00000620429 IMPA2O14732 288 aa9.71□□□□□ -0.85
VPS11-207ENST00000620429 ITGA10O75578 1167 aa9.71□□□□□ -0.85
VPS11-207ENST00000620429 UBBP0CG47 229 aa9.71□□□□□ -0.85
VPS11-207ENST00000620429 UBCP0CG48 685 aaKnown RBP9.71□□□□□ -0.85
VPS11-207ENST00000620429 TYMPP19971 482 aa9.71□□□□□ -0.85
VPS11-207ENST00000620429 RGRP47804 291 aa9.71□□□□□ -0.85
VPS11-207ENST00000620429 RPS14P62263 151 aaKnown RBP9.71□□□□□ -0.85
VPS11-207ENST00000620429 RPS27AP62979 156 aaKnown RBP9.71□□□□□ -0.85
VPS11-207ENST00000620429 UBA52P62987 128 aaKnown RBP9.71□□□□□ -0.85
VPS11-207ENST00000620429 MAT1AQ00266 395 aaKnown RBP9.71□□□□□ -0.85
VPS11-207ENST00000620429 COTL1Q14019 142 aa9.71□□□□□ -0.85
VPS11-207ENST00000620429 SLC24A5Q71RS6 500 aa9.71□□□□□ -0.85
VPS11-207ENST00000620429 SIAH3Q8IW03 269 aa9.71□□□□□ -0.85
VPS11-207ENST00000620429 RELL2Q8NC24 303 aaPredicted RBP9.71□□□□□ -0.85
VPS11-207ENST00000620429 TMEM185AQ8NFB2 350 aa9.71□□□□□ -0.85
VPS11-207ENST00000620429 OR6X1Q8NH79 312 aa9.71□□□□□ -0.85
VPS11-207ENST00000620429 RHOVQ96L33 236 aa9.71□□□□□ -0.85
VPS11-207ENST00000620429 ZNF354BQ96LW1 612 aa9.71□□□□□ -0.85
VPS11-207ENST00000620429 TSSK3Q96PN8 268 aa9.71□□□□□ -0.85
VPS11-207ENST00000620429 GPR62Q9BZJ7 368 aa9.71□□□□□ -0.85
VPS11-207ENST00000620429 ELOVL2Q9NXB9 296 aa9.71□□□□□ -0.85
VPS11-207ENST00000620429 WWOXQ9NZC7 414 aa9.71□□□□□ -0.85
VPS11-207ENST00000620429 ZNF629Q9UEG4 869 aaPredicted RBP9.71□□□□□ -0.85
VPS11-207ENST00000620429 PISDQ9UG56 409 aa9.71□□□□□ -0.85
VPS11-207ENST00000620429 PCDHB10Q9UN67 800 aa9.71□□□□□ -0.85
VPS11-207ENST00000620429 PCDHB9Q9Y5E1 797 aa9.71□□□□□ -0.85
VPS11-207ENST00000620429 IRAK3Q9Y616 596 aa9.71□□□□□ -0.85
VPS11-207ENST00000620429 PTPRDP23468 1912 aa9.71□□□□□ -0.85
VPS11-207ENST00000620429 A0A0D9SEW6 157 aa9.71□□□□□ -0.86
VPS11-207ENST00000620429 METTL21EPA6NDL7 271 aa9.71□□□□□ -0.86
VPS11-207ENST00000620429 MCIDASD6RGH6 385 aa9.71□□□□□ -0.86
VPS11-207ENST00000620429 RFXANKO14593 260 aa9.71□□□□□ -0.86
VPS11-207ENST00000620429 MID1O15344 667 aa9.71□□□□□ -0.86
VPS11-207ENST00000620429 TAPBPO15533 448 aa9.71□□□□□ -0.86
VPS11-207ENST00000620429 KCNK5O95279 499 aa9.71□□□□□ -0.86
VPS11-207ENST00000620429 C1QCP02747 245 aa9.71□□□□□ -0.86
VPS11-207ENST00000620429 ABOP16442 354 aa9.71□□□□□ -0.86
VPS11-207ENST00000620429 CRISP1P54107 249 aa9.71□□□□□ -0.86
VPS11-207ENST00000620429 WNT4P56705 351 aa9.71□□□□□ -0.86
VPS11-207ENST00000620429 YBEYP58557 167 aaPredicted RBP9.71□□□□□ -0.86
VPS11-207ENST00000620429 UBE2IP63279 158 aaKnown RBP9.71□□□□□ -0.86
VPS11-207ENST00000620429 ELAVL2Q12926 359 aaKnown RBP9.71□□□□□ -0.86
VPS11-207ENST00000620429 VEZF1Q14119 521 aa9.71□□□□□ -0.86
VPS11-207ENST00000620429 GANABQ14697 944 aaKnown RBP9.71□□□□□ -0.86
VPS11-207ENST00000620429 TCTN1Q2MV58 587 aa9.71□□□□□ -0.86
VPS11-207ENST00000620429 RSPO2Q6UXX9 243 aaPredicted RBP9.71□□□□□ -0.86
VPS11-207ENST00000620429 CPXM2Q8N436 756 aa9.71□□□□□ -0.86
VPS11-207ENST00000620429 MYEOVQ96EZ4 313 aa9.71□□□□□ -0.86
VPS11-207ENST00000620429 SLC6A18Q96N87 628 aa9.71□□□□□ -0.86
VPS11-207ENST00000620429 SPON2Q9BUD6 331 aa9.71□□□□□ -0.86
VPS11-207ENST00000620429 IFT27Q9BW83 186 aa9.71□□□□□ -0.86
VPS11-207ENST00000620429 METTL9Q9H1A3 318 aa9.71□□□□□ -0.86
VPS11-207ENST00000620429 TEX10Q9NXF1 929 aaPredicted RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms