RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 A0A087WV62 115 aa10.06□□□□□ -0.8
TARDBP-221ENST00000619555 OR2M5A3KFT3 312 aa10.06□□□□□ -0.8
TARDBP-221ENST00000619555 SIAH2O43255 324 aa10.06□□□□□ -0.8
TARDBP-221ENST00000619555 SEC14L5O43304 696 aa10.06□□□□□ -0.8
TARDBP-221ENST00000619555 RGS14O43566 566 aa10.06□□□□□ -0.8
TARDBP-221ENST00000619555 SEC22BO75396 215 aa10.06□□□□□ -0.8
TARDBP-221ENST00000619555 PSMG1O95456 288 aa10.06□□□□□ -0.8
TARDBP-221ENST00000619555 CRHP06850 196 aa10.06□□□□□ -0.8
TARDBP-221ENST00000619555 SDC1P18827 310 aa10.06□□□□□ -0.8
TARDBP-221ENST00000619555 CD79BP40259 229 aa10.06□□□□□ -0.8
TARDBP-221ENST00000619555 KIR2DL2P43627 348 aaPredicted RBP10.06□□□□□ -0.8
TARDBP-221ENST00000619555 GSTM5P46439 218 aa10.06□□□□□ -0.8
TARDBP-221ENST00000619555 RFX3P48380 749 aa10.06□□□□□ -0.8
TARDBP-221ENST00000619555 CLDN20P56880 219 aa10.06□□□□□ -0.8
TARDBP-221ENST00000619555 RPL38P63173 70 aaKnown RBP10.06□□□□□ -0.8
TARDBP-221ENST00000619555 SIRPAP78324 504 aa10.06□□□□□ -0.8
TARDBP-221ENST00000619555 PDCD2Q16342 344 aaPredicted RBP10.06□□□□□ -0.8
TARDBP-221ENST00000619555 OR2A2Q6IF42 318 aa10.06□□□□□ -0.8
TARDBP-221ENST00000619555 Q71RC1 249 aaPredicted RBP10.06□□□□□ -0.8
TARDBP-221ENST00000619555 MARCH3Q86UD3 253 aa10.06□□□□□ -0.8
TARDBP-221ENST00000619555 CXorf67Q86X51 503 aaPredicted RBP10.06□□□□□ -0.8
TARDBP-221ENST00000619555 MEIOBQ8N635 442 aa10.06□□□□□ -0.8
TARDBP-221ENST00000619555 ELP4Q96EB1 424 aa10.06□□□□□ -0.8
TARDBP-221ENST00000619555 PPP1R36Q96LQ0 422 aa10.06□□□□□ -0.8
TARDBP-221ENST00000619555 AMDHD1Q96NU7 426 aa10.06□□□□□ -0.8
TARDBP-221ENST00000619555 PINK1Q9BXM7 581 aa10.06□□□□□ -0.8
TARDBP-221ENST00000619555 MYNNQ9NPC7 610 aa10.06□□□□□ -0.8
TARDBP-221ENST00000619555 MIEF1Q9NQG6 463 aa10.06□□□□□ -0.8
TARDBP-221ENST00000619555 SDHAF3Q9NRP4 125 aa10.06□□□□□ -0.8
TARDBP-221ENST00000619555 BEX4Q9NWD9 120 aaPredicted RBP10.06□□□□□ -0.8
TARDBP-221ENST00000619555 C1orf109Q9NX04 203 aa10.06□□□□□ -0.8
TARDBP-221ENST00000619555 KLHL28Q9NXS3 571 aa10.06□□□□□ -0.8
TARDBP-221ENST00000619555 NKIRAS1Q9NYS0 192 aa10.06□□□□□ -0.8
TARDBP-221ENST00000619555 TAS2R7Q9NYW3 318 aa10.06□□□□□ -0.8
TARDBP-221ENST00000619555 EIF3LQ9Y262 564 aaKnown RBP10.06□□□□□ -0.8
TARDBP-221ENST00000619555 NUP214P35658 2090 aaPredicted RBP10.05□□□□□ -0.8
TARDBP-221ENST00000619555 GXYLT2A0PJZ3 443 aa10.05□□□□□ -0.8
TARDBP-221ENST00000619555 DEFB108AA8MXU0 73 aa10.05□□□□□ -0.8
TARDBP-221ENST00000619555 HMGB1P1B2RPK0 211 aaPredicted RBP10.05□□□□□ -0.8
TARDBP-221ENST00000619555 SHISA8B8ZZ34 492 aa10.05□□□□□ -0.8
TARDBP-221ENST00000619555 H3BML4 177 aa10.05□□□□□ -0.8
TARDBP-221ENST00000619555 GMFGO60234 142 aa10.05□□□□□ -0.8
TARDBP-221ENST00000619555 PEX11AO75192 247 aa10.05□□□□□ -0.8
TARDBP-221ENST00000619555 IL33O95760 270 aa10.05□□□□□ -0.8
TARDBP-221ENST00000619555 CHEK2O96017 543 aa10.05□□□□□ -0.8
TARDBP-221ENST00000619555 IGKV1D-16P01601 117 aa10.05□□□□□ -0.8
TARDBP-221ENST00000619555 NEFHP12036 1026 aa10.05□□□□□ -0.8
TARDBP-221ENST00000619555 NTSP30990 170 aa10.05□□□□□ -0.8
TARDBP-221ENST00000619555 GABRA3P34903 492 aa10.05□□□□□ -0.8
TARDBP-221ENST00000619555 RPL14P50914 215 aaKnown RBP10.05□□□□□ -0.8
TARDBP-221ENST00000619555 EEFSECP57772 596 aaKnown RBP10.05□□□□□ -0.8
TARDBP-221ENST00000619555 NKX6-1P78426 367 aaPredicted RBP10.05□□□□□ -0.8
TARDBP-221ENST00000619555 OCRLQ01968 901 aa10.05□□□□□ -0.8
TARDBP-221ENST00000619555 DECR1Q16698 335 aa10.05□□□□□ -0.8
TARDBP-221ENST00000619555 GALNTL6Q49A17 601 aa10.05□□□□□ -0.8
TARDBP-221ENST00000619555 APOOLQ6UXV4 268 aa10.05□□□□□ -0.8
TARDBP-221ENST00000619555 ZNF551Q7Z340 670 aaPredicted RBP10.05□□□□□ -0.8
TARDBP-221ENST00000619555 OR2L13Q8N349 312 aa10.05□□□□□ -0.8
TARDBP-221ENST00000619555 FAM76AQ8TAV0 307 aa10.05□□□□□ -0.8
TARDBP-221ENST00000619555 FNDC9Q8TBE3 224 aa10.05□□□□□ -0.8
TARDBP-221ENST00000619555 C1GALT1C1Q96EU7 318 aa10.05□□□□□ -0.8
TARDBP-221ENST00000619555 ZNF845Q96IR2 970 aaPredicted RBP10.05□□□□□ -0.8
TARDBP-221ENST00000619555 LMF2Q9BU23 707 aaKnown RBP10.05□□□□□ -0.8
TARDBP-221ENST00000619555 MANSC1Q9H8J5 431 aa10.05□□□□□ -0.8
TARDBP-221ENST00000619555 Q9N2J8 555 aa10.05□□□□□ -0.8
TARDBP-221ENST00000619555 DDX18Q9NVP1 670 aaKnown RBP10.05□□□□□ -0.8
TARDBP-221ENST00000619555 FAM120CQ9NX05 1096 aaKnown RBP10.05□□□□□ -0.8
TARDBP-221ENST00000619555 ABCG2Q9UNQ0 655 aa10.05□□□□□ -0.8
TARDBP-221ENST00000619555 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.05□□□□□ -0.8
TARDBP-221ENST00000619555 EMC8O43402 210 aa10.04□□□□□ -0.8
TARDBP-221ENST00000619555 TNFRSF21O75509 655 aa10.04□□□□□ -0.8
TARDBP-221ENST00000619555 SLITRK5O94991 958 aa10.04□□□□□ -0.8
TARDBP-221ENST00000619555 UTS2O95399 124 aa10.04□□□□□ -0.8
TARDBP-221ENST00000619555 CGAP01215 116 aa10.04□□□□□ -0.8
TARDBP-221ENST00000619555 POU2F1P14859 743 aa10.04□□□□□ -0.8
TARDBP-221ENST00000619555 CCKARP32238 428 aa10.04□□□□□ -0.8
TARDBP-221ENST00000619555 CLK3P49761 638 aaKnown RBP10.04□□□□□ -0.8
TARDBP-221ENST00000619555 LTBQ06643 244 aa10.04□□□□□ -0.8
TARDBP-221ENST00000619555 GANABQ14697 944 aaKnown RBP10.04□□□□□ -0.8
TARDBP-221ENST00000619555 PON3Q15166 354 aa10.04□□□□□ -0.8
TARDBP-221ENST00000619555 ZNHIT3Q15649 155 aaPredicted RBP10.04□□□□□ -0.8
TARDBP-221ENST00000619555 GRAMD1BQ3KR37 738 aa10.04□□□□□ -0.8
TARDBP-221ENST00000619555 ZNF385BQ569K4 471 aa10.04□□□□□ -0.8
TARDBP-221ENST00000619555 C6orf136Q5SQH8 315 aa10.04□□□□□ -0.8
TARDBP-221ENST00000619555 ANKRD26P1Q6NSI1 321 aa10.04□□□□□ -0.8
TARDBP-221ENST00000619555 C22orf34Q6ZV56 151 aa10.04□□□□□ -0.8
TARDBP-221ENST00000619555 ZNF550Q7Z398 422 aa10.04□□□□□ -0.8
TARDBP-221ENST00000619555 MAVSQ7Z434 540 aa10.04□□□□□ -0.8
TARDBP-221ENST00000619555 BIVMQ86UB2 503 aa10.04□□□□□ -0.8
TARDBP-221ENST00000619555 ZNF610Q8N9Z0 462 aa10.04□□□□□ -0.8
TARDBP-221ENST00000619555 CLHC1Q8NHS4 586 aa10.04□□□□□ -0.8
TARDBP-221ENST00000619555 NUDT8Q8WV74 236 aa10.04□□□□□ -0.8
TARDBP-221ENST00000619555 PIK3R3Q92569 461 aa10.04□□□□□ -0.8
TARDBP-221ENST00000619555 ZNF75CPQ92670 426 aaPredicted RBP10.04□□□□□ -0.8
TARDBP-221ENST00000619555 GFM2Q969S9 779 aaKnown RBP10.04□□□□□ -0.8
TARDBP-221ENST00000619555 PIK3IP1Q96FE7 263 aa10.04□□□□□ -0.8
TARDBP-221ENST00000619555 METTL2AQ96IZ6 378 aaKnown RBP10.04□□□□□ -0.8
TARDBP-221ENST00000619555 C18orf12Q96KH6 178 aa10.04□□□□□ -0.8
TARDBP-221ENST00000619555 TSSK3Q96PN8 268 aa10.04□□□□□ -0.8
TARDBP-221ENST00000619555 MED18Q9BUE0 208 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms