RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 SLC36A4Q6YBV0 504 aa6.96□□□□□ -1.29
PDE6A-205ENST00000617647 Q6ZSR9 355 aa6.96□□□□□ -1.29
PDE6A-205ENST00000617647 KCTD9Q7L273 389 aa6.96□□□□□ -1.29
PDE6A-205ENST00000617647 TAS1R3Q7RTX0 852 aa6.96□□□□□ -1.29
PDE6A-205ENST00000617647 OR5M1Q8NGP8 315 aa6.96□□□□□ -1.29
PDE6A-205ENST00000617647 MFSD8Q8NHS3 518 aa6.96□□□□□ -1.29
PDE6A-205ENST00000617647 GNPDA2Q8TDQ7 276 aa6.96□□□□□ -1.29
PDE6A-205ENST00000617647 CRYGNQ8WXF5 182 aa6.96□□□□□ -1.29
PDE6A-205ENST00000617647 MASTLQ96GX5 879 aa6.96□□□□□ -1.29
PDE6A-205ENST00000617647 THOC3Q96J01 351 aaKnown RBP6.96□□□□□ -1.29
PDE6A-205ENST00000617647 FCRL5Q96RD9 977 aa6.96□□□□□ -1.29
PDE6A-205ENST00000617647 NUDT4Q9NZJ9 180 aa6.96□□□□□ -1.29
PDE6A-205ENST00000617647 TRPC4Q9UBN4 977 aa6.96□□□□□ -1.29
PDE6A-205ENST00000617647 FARSAQ9Y285 508 aaKnown RBP6.96□□□□□ -1.29
PDE6A-205ENST00000617647 TAF1P21675 1872 aa6.96□□□□□ -1.29
PDE6A-205ENST00000617647 A0A1B0GV50 99 aa6.96□□□□□ -1.3
PDE6A-205ENST00000617647 NAP1L6A6NFF2 107 aa6.96□□□□□ -1.3
PDE6A-205ENST00000617647 FLRT2O43155 660 aa6.96□□□□□ -1.3
PDE6A-205ENST00000617647 MBTPS2O43462 519 aa6.96□□□□□ -1.3
PDE6A-205ENST00000617647 KCNQ2O43526 872 aa6.96□□□□□ -1.3
PDE6A-205ENST00000617647 GIMD1P0DJR0 217 aa6.96□□□□□ -1.3
PDE6A-205ENST00000617647 CKBP12277 381 aa6.96□□□□□ -1.3
PDE6A-205ENST00000617647 OSMP13725 252 aa6.96□□□□□ -1.3
PDE6A-205ENST00000617647 PKMP14618 531 aaKnown RBP6.96□□□□□ -1.3
PDE6A-205ENST00000617647 SNRPBP14678 240 aaKnown RBP6.96□□□□□ -1.3
PDE6A-205ENST00000617647 FABP4P15090 132 aa6.96□□□□□ -1.3
PDE6A-205ENST00000617647 IFNGR1P15260 489 aa6.96□□□□□ -1.3
PDE6A-205ENST00000617647 MGMTP16455 207 aa6.96□□□□□ -1.3
PDE6A-205ENST00000617647 EPORP19235 508 aa6.96□□□□□ -1.3
PDE6A-205ENST00000617647 MRPL19P49406 292 aaKnown RBP6.96□□□□□ -1.3
PDE6A-205ENST00000617647 RABGGTBP53611 331 aa6.96□□□□□ -1.3
PDE6A-205ENST00000617647 CNTN1Q12860 1018 aa6.96□□□□□ -1.3
PDE6A-205ENST00000617647 TNFAIP1Q13829 316 aa6.96□□□□□ -1.3
PDE6A-205ENST00000617647 SURF2Q15527 256 aaPredicted RBP6.96□□□□□ -1.3
PDE6A-205ENST00000617647 TMEM69Q5SWH9 247 aa6.96□□□□□ -1.3
PDE6A-205ENST00000617647 HBMQ6B0K9 141 aa6.96□□□□□ -1.3
PDE6A-205ENST00000617647 PHYKPLQ8IUZ5 450 aa6.96□□□□□ -1.3
PDE6A-205ENST00000617647 FAM24BQ8N5W8 94 aa6.96□□□□□ -1.3
PDE6A-205ENST00000617647 C15orf54Q8N8G6 183 aa6.96□□□□□ -1.3
PDE6A-205ENST00000617647 OR52B4Q8NGK2 314 aa6.96□□□□□ -1.3
PDE6A-205ENST00000617647 DUSP19Q8WTR2 217 aa6.96□□□□□ -1.3
PDE6A-205ENST00000617647 MFSD1Q9H3U5 465 aa6.96□□□□□ -1.3
PDE6A-205ENST00000617647 RNF19AQ9NV58 838 aa6.96□□□□□ -1.3
PDE6A-205ENST00000617647 ARL15Q9NXU5 204 aa6.96□□□□□ -1.3
PDE6A-205ENST00000617647 PCDHB9Q9Y5E1 797 aa6.96□□□□□ -1.3
PDE6A-205ENST00000617647 COL16A1Q07092 1604 aaPredicted RBP6.96□□□□□ -1.3
PDE6A-205ENST00000617647 VEGFDO43915 354 aa6.96□□□□□ -1.3
PDE6A-205ENST00000617647 RPP40O75818 363 aaKnown RBP6.96□□□□□ -1.3
PDE6A-205ENST00000617647 AQP8O94778 261 aa6.96□□□□□ -1.3
PDE6A-205ENST00000617647 S1PR4O95977 384 aa6.96□□□□□ -1.3
PDE6A-205ENST00000617647 H1F0P07305 194 aaKnown RBP6.96□□□□□ -1.3
PDE6A-205ENST00000617647 C1GALT1C1LP0DN25 315 aa6.96□□□□□ -1.3
PDE6A-205ENST00000617647 CRABP1P29762 137 aa6.96□□□□□ -1.3
PDE6A-205ENST00000617647 CD80P33681 288 aa6.96□□□□□ -1.3
PDE6A-205ENST00000617647 ACVR1BP36896 505 aa6.96□□□□□ -1.3
PDE6A-205ENST00000617647 IFNGR2P38484 337 aa6.96□□□□□ -1.3
PDE6A-205ENST00000617647 DGKGP49619 791 aa6.96□□□□□ -1.3
PDE6A-205ENST00000617647 CCL23P55773 120 aa6.96□□□□□ -1.3
PDE6A-205ENST00000617647 CARD18P57730 90 aa6.96□□□□□ -1.3
PDE6A-205ENST00000617647 NHLH2Q02577 135 aa6.96□□□□□ -1.3
PDE6A-205ENST00000617647 SRSF11Q05519 484 aaKnown RBP6.96□□□□□ -1.3
PDE6A-205ENST00000617647 NFATC4Q14934 902 aa6.96□□□□□ -1.3
PDE6A-205ENST00000617647 UBXN2BQ14CS0 331 aa6.96□□□□□ -1.3
PDE6A-205ENST00000617647 PGM5Q15124 567 aa6.96□□□□□ -1.3
PDE6A-205ENST00000617647 C18orf21Q32NC0 220 aaPredicted RBP6.96□□□□□ -1.3
PDE6A-205ENST00000617647 UBXN11Q5T124 520 aa6.96□□□□□ -1.3
PDE6A-205ENST00000617647 RNF219Q5W0B1 726 aaPredicted RBP6.96□□□□□ -1.3
PDE6A-205ENST00000617647 EEF1DP3Q658K8 133 aa6.96□□□□□ -1.3
PDE6A-205ENST00000617647 OR7E24Q6IFN5 339 aa6.96□□□□□ -1.3
PDE6A-205ENST00000617647 USP50Q70EL3 339 aaPredicted RBP6.96□□□□□ -1.3
PDE6A-205ENST00000617647 SMIM5Q71RC9 77 aa6.96□□□□□ -1.3
PDE6A-205ENST00000617647 GLT6D1Q7Z4J2 308 aa6.96□□□□□ -1.3
PDE6A-205ENST00000617647 NPAS3Q8IXF0 933 aa6.96□□□□□ -1.3
PDE6A-205ENST00000617647 ZNF283Q8N7M2 679 aa6.96□□□□□ -1.3
PDE6A-205ENST00000617647 PCSK9Q8NBP7 692 aaKnown RBP6.96□□□□□ -1.3
PDE6A-205ENST00000617647 CHST14Q8NCH0 376 aa6.96□□□□□ -1.3
PDE6A-205ENST00000617647 OR51G2Q8NGK0 314 aa6.96□□□□□ -1.3
PDE6A-205ENST00000617647 OR13C4Q8NGS5 318 aa6.96□□□□□ -1.3
PDE6A-205ENST00000617647 CASTOR1Q8WTX7 329 aa6.96□□□□□ -1.3
PDE6A-205ENST00000617647 ZNF707Q96C28 371 aaPredicted RBP6.96□□□□□ -1.3
PDE6A-205ENST00000617647 C14orf144Q96I85 54 aa6.96□□□□□ -1.3
PDE6A-205ENST00000617647 CLCC1Q96S66 551 aa6.96□□□□□ -1.3
PDE6A-205ENST00000617647 DUSP26Q9BV47 211 aa6.96□□□□□ -1.3
PDE6A-205ENST00000617647 GPR61Q9BZJ8 451 aa6.96□□□□□ -1.3
PDE6A-205ENST00000617647 ULBP1Q9BZM6 244 aa6.96□□□□□ -1.3
PDE6A-205ENST00000617647 TRIM36Q9NQ86 728 aa6.96□□□□□ -1.3
PDE6A-205ENST00000617647 TUBG2Q9NRH3 451 aa6.96□□□□□ -1.3
PDE6A-205ENST00000617647 GTF2A1LQ9UNN4 478 aa6.96□□□□□ -1.3
PDE6A-205ENST00000617647 EEF1E1-BLOC1S5C9J1V9 151 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 FAM72CH0Y354 149 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 CACNB4O00305 520 aaPredicted RBP6.95□□□□□ -1.3
PDE6A-205ENST00000617647 UBL3O95164 117 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 PCDH8O95206 1070 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 HPP00738 406 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 CPEP16870 476 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 BPIP17213 487 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 SHC1P29353 583 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 CAP2P40123 477 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 E2F1Q01094 437 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 ECH1Q13011 328 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms