RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 Q6ZSR9 355 aa13.86□□□□□ -0.19
SNPH-203ENST00000614659 GAREM2Q75VX8 874 aa13.86□□□□□ -0.19
SNPH-203ENST00000614659 TMEFF1Q8IYR6 380 aa13.86□□□□□ -0.19
SNPH-203ENST00000614659 ACOT11Q8WXI4 607 aaPredicted RBP13.86□□□□□ -0.19
SNPH-203ENST00000614659 NANOS1Q8WY41 292 aaKnown RBP13.86□□□□□ -0.19
SNPH-203ENST00000614659 MAP3K3Q99759 626 aa13.86□□□□□ -0.19
SNPH-203ENST00000614659 SLC6A16Q9GZN6 736 aa13.86□□□□□ -0.19
SNPH-203ENST00000614659 TAS2R3Q9NYW6 316 aa13.86□□□□□ -0.19
SNPH-203ENST00000614659 ARPC4-TTLL3A0A0A6YYG9 625 aa13.85□□□□□ -0.19
SNPH-203ENST00000614659 MYOGP15173 224 aa13.85□□□□□ -0.19
SNPH-203ENST00000614659 PXNP49023 591 aaPredicted RBP13.85□□□□□ -0.19
SNPH-203ENST00000614659 CTSCP53634 463 aa13.85□□□□□ -0.19
SNPH-203ENST00000614659 CLRN1P58418 232 aa13.85□□□□□ -0.19
SNPH-203ENST00000614659 FGL1Q08830 312 aa13.85□□□□□ -0.19
SNPH-203ENST00000614659 NTRK2Q16620 822 aa13.85□□□□□ -0.19
SNPH-203ENST00000614659 ALG10BQ5I7T1 473 aa13.85□□□□□ -0.19
SNPH-203ENST00000614659 TMED4Q7Z7H5 227 aa13.85□□□□□ -0.19
SNPH-203ENST00000614659 ZNF100Q8IYN0 542 aa13.85□□□□□ -0.19
SNPH-203ENST00000614659 S100PBPQ96BU1 408 aa13.85□□□□□ -0.19
SNPH-203ENST00000614659 TCTN2Q96GX1 697 aa13.85□□□□□ -0.19
SNPH-203ENST00000614659 SLA2Q9H6Q3 261 aa13.85□□□□□ -0.19
SNPH-203ENST00000614659 HCRTR2O43614 444 aa13.85□□□□□ -0.19
SNPH-203ENST00000614659 SRPX2O60687 465 aaPredicted RBP13.85□□□□□ -0.19
SNPH-203ENST00000614659 CSTBP04080 98 aaKnown RBP13.85□□□□□ -0.19
SNPH-203ENST00000614659 PRKCAP17252 672 aa13.85□□□□□ -0.19
SNPH-203ENST00000614659 VAMP1P23763 118 aa13.85□□□□□ -0.19
SNPH-203ENST00000614659 HLA-FP30511 346 aa13.85□□□□□ -0.19
SNPH-203ENST00000614659 CA5AP35218 305 aa13.85□□□□□ -0.19
SNPH-203ENST00000614659 RGS6P49758 472 aa13.85□□□□□ -0.19
SNPH-203ENST00000614659 HNRNPFP52597 415 aaKnown RBP13.85□□□□□ -0.19
SNPH-203ENST00000614659 TMEM225Q6GV28 225 aa13.85□□□□□ -0.19
SNPH-203ENST00000614659 MAMDC2Q7Z304 686 aaPredicted RBP13.85□□□□□ -0.19
SNPH-203ENST00000614659 ERVK13-1Q9NX77 482 aa13.85□□□□□ -0.19
SNPH-203ENST00000614659 SOX1O00570 391 aaPredicted RBP13.85□□□□□ -0.19
SNPH-203ENST00000614659 ART1P52961 327 aa13.85□□□□□ -0.19
SNPH-203ENST00000614659 ARG2P78540 354 aa13.85□□□□□ -0.19
SNPH-203ENST00000614659 SF3A2Q15428 464 aaKnown RBP13.85□□□□□ -0.19
SNPH-203ENST00000614659 GFOD2Q3B7J2 385 aa13.85□□□□□ -0.19
SNPH-203ENST00000614659 IER5LQ5T953 404 aa13.85□□□□□ -0.19
SNPH-203ENST00000614659 UBQLNLQ8IYU4 475 aa13.85□□□□□ -0.19
SNPH-203ENST00000614659 C1QTNF2Q9BXJ5 285 aa13.85□□□□□ -0.19
SNPH-203ENST00000614659 ABCG5Q9H222 651 aa13.85□□□□□ -0.19
SNPH-203ENST00000614659 CXCL16Q9H2A7 254 aa13.85□□□□□ -0.19
SNPH-203ENST00000614659 VSTM2BA6NLU5 285 aa13.85□□□□□ -0.19
SNPH-203ENST00000614659 DNASE1P24855 282 aa13.85□□□□□ -0.19
SNPH-203ENST00000614659 RIDAP52758 137 aaKnown RBP13.85□□□□□ -0.19
SNPH-203ENST00000614659 TMEM52BQ4KMG9 183 aa13.85□□□□□ -0.19
SNPH-203ENST00000614659 PLBD1Q6P4A8 553 aa13.85□□□□□ -0.19
SNPH-203ENST00000614659 ADAMTSL4Q6UY14 1074 aa13.85□□□□□ -0.19
SNPH-203ENST00000614659 GAB3Q8WWW8 586 aa13.85□□□□□ -0.19
SNPH-203ENST00000614659 JPH3Q8WXH2 748 aaPredicted RBP13.85□□□□□ -0.19
SNPH-203ENST00000614659 THSD1Q9NS62 852 aa13.85□□□□□ -0.19
SNPH-203ENST00000614659 TAAR2Q9P1P5 351 aa13.85□□□□□ -0.19
SNPH-203ENST00000614659 MMP2P08253 660 aa13.84□□□□□ -0.19
SNPH-203ENST00000614659 HCKP08631 526 aa13.84□□□□□ -0.19
SNPH-203ENST00000614659 SPARCP09486 303 aa13.84□□□□□ -0.19
SNPH-203ENST00000614659 CLUP10909 449 aa13.84□□□□□ -0.19
SNPH-203ENST00000614659 SLC5A2P31639 672 aa13.84□□□□□ -0.19
SNPH-203ENST00000614659 SLC6A9P48067 706 aa13.84□□□□□ -0.19
SNPH-203ENST00000614659 PSPHP78330 225 aa13.84□□□□□ -0.19
SNPH-203ENST00000614659 FRMPD2BQ6IN97 320 aa13.84□□□□□ -0.19
SNPH-203ENST00000614659 KIF18BQ86Y91 864 aa13.84□□□□□ -0.19
SNPH-203ENST00000614659 OR2L8Q8NGY9 312 aa13.84□□□□□ -0.19
SNPH-203ENST00000614659 OR5K2Q8NHB8 316 aa13.84□□□□□ -0.19
SNPH-203ENST00000614659 ELP5Q8TE02 316 aa13.84□□□□□ -0.19
SNPH-203ENST00000614659 GGHQ92820 318 aa13.84□□□□□ -0.19
SNPH-203ENST00000614659 UHRF1Q96T88 793 aaPredicted RBP13.84□□□□□ -0.19
SNPH-203ENST00000614659 ZNF700Q9H0M5 742 aa13.84□□□□□ -0.19
SNPH-203ENST00000614659 SACM1LQ9NTJ5 587 aa13.84□□□□□ -0.19
SNPH-203ENST00000614659 KCND3Q9UK17 655 aa13.84□□□□□ -0.19
SNPH-203ENST00000614659 C13orf42A0A1B0GVH6 325 aa13.84□□□□□ -0.19
SNPH-203ENST00000614659 SMIM30A4D0T7 59 aa13.84□□□□□ -0.19
SNPH-203ENST00000614659 ATE1O95260 518 aa13.84□□□□□ -0.19
SNPH-203ENST00000614659 H2BFMP0C1H6 154 aa13.84□□□□□ -0.19
SNPH-203ENST00000614659 ZNF767PQ75MW2 155 aa13.84□□□□□ -0.19
SNPH-203ENST00000614659 FUNDC1Q8IVP5 155 aa13.84□□□□□ -0.19
SNPH-203ENST00000614659 ACOT4Q8N9L9 421 aa13.84□□□□□ -0.19
SNPH-203ENST00000614659 SEC61A2Q9H9S3 476 aa13.84□□□□□ -0.19
SNPH-203ENST00000614659 NANSQ9NR45 359 aa13.84□□□□□ -0.19
SNPH-203ENST00000614659 COL5A3P25940 1745 aaPredicted RBP13.84□□□□□ -0.19
SNPH-203ENST00000614659 A0A1W2PQL4 384 aaPredicted RBP13.84□□□□□ -0.19
SNPH-203ENST00000614659 FTCDNL1E5RQL4 147 aa13.84□□□□□ -0.19
SNPH-203ENST00000614659 FAM227AF5H4B4 570 aa13.84□□□□□ -0.19
SNPH-203ENST00000614659 CERS1P27544 350 aa13.84□□□□□ -0.19
SNPH-203ENST00000614659 TAP2Q03519 686 aa13.84□□□□□ -0.19
SNPH-203ENST00000614659 RELAQ04206 551 aa13.84□□□□□ -0.19
SNPH-203ENST00000614659 TMPPEQ6ZT21 453 aa13.84□□□□□ -0.19
SNPH-203ENST00000614659 ALG8Q9BVK2 526 aa13.84□□□□□ -0.19
SNPH-203ENST00000614659 TMEM38AQ9H6F2 299 aa13.84□□□□□ -0.19
SNPH-203ENST00000614659 A4GALTQ9NPC4 353 aa13.84□□□□□ -0.19
SNPH-203ENST00000614659 SLC7A7Q9UM01 511 aa13.84□□□□□ -0.19
SNPH-203ENST00000614659 CXorf51AA0A1B0GTR3 108 aa13.84□□□□□ -0.19
SNPH-203ENST00000614659 ANTXRLA6NF34 631 aa13.84□□□□□ -0.19
SNPH-203ENST00000614659 M0R3H8 397 aa13.84□□□□□ -0.19
SNPH-203ENST00000614659 KLK8O60259 260 aa13.84□□□□□ -0.19
SNPH-203ENST00000614659 PRAF2O60831 178 aa13.84□□□□□ -0.19
SNPH-203ENST00000614659 SCGB1D2O95969 90 aa13.84□□□□□ -0.19
SNPH-203ENST00000614659 IGLV3-27P01718 113 aa13.84□□□□□ -0.19
SNPH-203ENST00000614659 ACP2P11117 423 aa13.84□□□□□ -0.19
SNPH-203ENST00000614659 TNFRSF1BP20333 461 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms