RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 RAB5AP20339 215 aa13.04□□□□□ -0.32
CHD1-212ENST00000614616 GPR143P51810 404 aa13.04□□□□□ -0.32
CHD1-212ENST00000614616 ZNF791Q3KP31 576 aaPredicted RBP13.04□□□□□ -0.32
CHD1-212ENST00000614616 NADSYN1Q6IA69 706 aa13.04□□□□□ -0.32
CHD1-212ENST00000614616 BRAT1Q6PJG6 821 aa13.04□□□□□ -0.32
CHD1-212ENST00000614616 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.04□□□□□ -0.32
CHD1-212ENST00000614616 KLHDC8BQ8IXV7 354 aa13.04□□□□□ -0.32
CHD1-212ENST00000614616 METTL21AQ8WXB1 218 aa13.04□□□□□ -0.32
CHD1-212ENST00000614616 HOXB13Q92826 284 aaPredicted RBP13.04□□□□□ -0.32
CHD1-212ENST00000614616 ZNF582Q96NG8 517 aaPredicted RBP13.04□□□□□ -0.32
CHD1-212ENST00000614616 ZNF251Q9BRH9 671 aa13.04□□□□□ -0.32
CHD1-212ENST00000614616 SUCNR1Q9BXA5 334 aa13.04□□□□□ -0.32
CHD1-212ENST00000614616 FZD3Q9NPG1 666 aa13.04□□□□□ -0.32
CHD1-212ENST00000614616 TOGARAM1Q9Y4F4 1720 aa13.04□□□□□ -0.32
CHD1-212ENST00000614616 SCN1AP35498 2009 aa13.04□□□□□ -0.32
CHD1-212ENST00000614616 OR2A25A4D2G3 310 aa13.04□□□□□ -0.32
CHD1-212ENST00000614616 NFYBP25208 207 aa13.04□□□□□ -0.32
CHD1-212ENST00000614616 EXO1Q9UQ84 846 aaKnown RBP13.04□□□□□ -0.32
CHD1-212ENST00000614616 DOCK2Q92608 1830 aa13.04□□□□□ -0.32
CHD1-212ENST00000614616 SLC16A6O15403 523 aa13.04□□□□□ -0.32
CHD1-212ENST00000614616 FBXO24O75426 580 aa13.04□□□□□ -0.32
CHD1-212ENST00000614616 RGS11O94810 467 aa13.04□□□□□ -0.32
CHD1-212ENST00000614616 GBAP04062 536 aa13.04□□□□□ -0.32
CHD1-212ENST00000614616 PCCBP05166 539 aa13.04□□□□□ -0.32
CHD1-212ENST00000614616 TIA1P31483 386 aaKnown RBP eCLIP13.04□□□□□ -0.322e-6■■■■□ 22.2
CHD1-212ENST00000614616 WDR5P61964 334 aaKnown RBP13.04□□□□□ -0.32
CHD1-212ENST00000614616 LILRA2Q8N149 483 aa13.04□□□□□ -0.32
CHD1-212ENST00000614616 RPL3LQ92901 407 aaKnown RBP13.04□□□□□ -0.32
CHD1-212ENST00000614616 PAPOLGQ9BWT3 736 aaKnown RBP13.04□□□□□ -0.32
CHD1-212ENST00000614616 SORBS1Q9BX66 1292 aaKnown RBP13.04□□□□□ -0.32
CHD1-212ENST00000614616 RLIMQ9NVW2 624 aa13.04□□□□□ -0.32
CHD1-212ENST00000614616 KMT2EQ8IZD2 1858 aa13.04□□□□□ -0.32
CHD1-212ENST00000614616 NCR1O76036 304 aa13.04□□□□□ -0.32
CHD1-212ENST00000614616 SEC61A1P61619 476 aaKnown RBP13.04□□□□□ -0.32
CHD1-212ENST00000614616 DHCR24Q15392 516 aa13.04□□□□□ -0.32
CHD1-212ENST00000614616 PAGE3Q5JUK9 113 aa13.04□□□□□ -0.32
CHD1-212ENST00000614616 TMIGD1Q6UXZ0 262 aa13.04□□□□□ -0.32
CHD1-212ENST00000614616 MOB1BQ7L9L4 216 aa13.04□□□□□ -0.32
CHD1-212ENST00000614616 OR4D10Q8NGI6 311 aa13.04□□□□□ -0.32
CHD1-212ENST00000614616 C16orf78Q8WTQ4 265 aa13.04□□□□□ -0.32
CHD1-212ENST00000614616 CMKLR1Q99788 373 aa13.04□□□□□ -0.32
CHD1-212ENST00000614616 C1orf123Q9NWV4 160 aa13.04□□□□□ -0.32
CHD1-212ENST00000614616 FAM96BQ9Y3D0 163 aa13.04□□□□□ -0.32
CHD1-212ENST00000614616 RREB1Q92766 1687 aa13.03□□□□□ -0.32
CHD1-212ENST00000614616 TRIM77I1YAP6 450 aa13.03□□□□□ -0.32
CHD1-212ENST00000614616 NPY5RQ15761 445 aa13.03□□□□□ -0.32
CHD1-212ENST00000614616 ADGRF3Q8IZF5 1079 aa13.03□□□□□ -0.32
CHD1-212ENST00000614616 TBL1XR1Q9BZK7 514 aa13.03□□□□□ -0.32
CHD1-212ENST00000614616 SEC61A2Q9H9S3 476 aa13.03□□□□□ -0.32
CHD1-212ENST00000614616 TDRD15B5MCY1 1934 aaKnown RBP13.03□□□□□ -0.32
CHD1-212ENST00000614616 A0A0B4J2A0 478 aa13.03□□□□□ -0.32
CHD1-212ENST00000614616 TBC1D3BA6NDS4 549 aa13.03□□□□□ -0.32
CHD1-212ENST00000614616 CELF2O95319 508 aaKnown RBP13.03□□□□□ -0.32
CHD1-212ENST00000614616 MAKP20794 623 aa13.03□□□□□ -0.32
CHD1-212ENST00000614616 CCKBRP32239 447 aa13.03□□□□□ -0.32
CHD1-212ENST00000614616 TLE1Q04724 770 aa13.03□□□□□ -0.32
CHD1-212ENST00000614616 LPCAT3Q6P1A2 487 aa13.03□□□□□ -0.32
CHD1-212ENST00000614616 DBX2Q6ZNG2 339 aa13.03□□□□□ -0.32
CHD1-212ENST00000614616 AMZ2Q86W34 360 aa13.03□□□□□ -0.32
CHD1-212ENST00000614616 BAGE3Q86Y29 109 aa13.03□□□□□ -0.32
CHD1-212ENST00000614616 BAGE2Q86Y30 109 aa13.03□□□□□ -0.32
CHD1-212ENST00000614616 OR4D6Q8NGJ1 314 aa13.03□□□□□ -0.32
CHD1-212ENST00000614616 LMLNQ96KR4 655 aa13.03□□□□□ -0.32
CHD1-212ENST00000614616 WRAP53Q9BUR4 548 aaKnown RBP13.03□□□□□ -0.32
CHD1-212ENST00000614616 POLDIP3Q9BY77 421 aaKnown RBP13.03□□□□□ -0.32
CHD1-212ENST00000614616 SHPKQ9UHJ6 478 aa13.03□□□□□ -0.32
CHD1-212ENST00000614616 RCE1Q9Y256 329 aa13.03□□□□□ -0.32
CHD1-212ENST00000614616 ANKUB1A6NFN9 424 aa13.03□□□□□ -0.32
CHD1-212ENST00000614616 CD63P08962 238 aa13.03□□□□□ -0.32
CHD1-212ENST00000614616 CDKN2DP55273 166 aa13.03□□□□□ -0.32
CHD1-212ENST00000614616 LILRA4P59901 499 aa13.03□□□□□ -0.32
CHD1-212ENST00000614616 EXOSC2Q13868 293 aaKnown RBP13.03□□□□□ -0.32
CHD1-212ENST00000614616 ZNF587Q96SQ5 575 aaPredicted RBP13.03□□□□□ -0.32
CHD1-212ENST00000614616 YJEFN3A6XGL0 299 aa13.03□□□□□ -0.32
CHD1-212ENST00000614616 NFKBIEO00221 500 aa13.03□□□□□ -0.32
CHD1-212ENST00000614616 SYPP08247 313 aa13.03□□□□□ -0.32
CHD1-212ENST00000614616 SMIM6P0DI80 62 aa13.03□□□□□ -0.32
CHD1-212ENST00000614616 RPL23AP62750 156 aaKnown RBP13.03□□□□□ -0.32
CHD1-212ENST00000614616 ZNF695Q8IW36 515 aa13.03□□□□□ -0.32
CHD1-212ENST00000614616 FBXO15Q8NCQ5 510 aaPredicted RBP13.03□□□□□ -0.32
CHD1-212ENST00000614616 MITD1Q8WV92 249 aa13.03□□□□□ -0.32
CHD1-212ENST00000614616 ZNF559Q9BR84 538 aa13.03□□□□□ -0.32
CHD1-212ENST00000614616 KCNS2Q9ULS6 477 aa13.03□□□□□ -0.32
CHD1-212ENST00000614616 PCDHA9Q9Y5H5 950 aa13.03□□□□□ -0.32
CHD1-212ENST00000614616 PLEKHS1Q5SXH7 462 aa13.03□□□□□ -0.32
CHD1-212ENST00000614616 OR52E2Q8NGJ4 325 aa13.03□□□□□ -0.32
CHD1-212ENST00000614616 NINJ1Q92982 152 aa13.03□□□□□ -0.32
CHD1-212ENST00000614616 PNPLA2Q96AD5 504 aa13.03□□□□□ -0.32
CHD1-212ENST00000614616 CCL15-CCL14A0A0B4J2E2 113 aa13.03□□□□□ -0.32
CHD1-212ENST00000614616 MEIS3P2A8K0S8 358 aa13.03□□□□□ -0.32
CHD1-212ENST00000614616 CCL15Q16663 113 aa13.03□□□□□ -0.32
CHD1-212ENST00000614616 LRP5LA4QPB2 252 aa13.02□□□□□ -0.32
CHD1-212ENST00000614616 HHLA1C9JL84 531 aa13.02□□□□□ -0.32
CHD1-212ENST00000614616 DPM1O60762 260 aa13.02□□□□□ -0.32
CHD1-212ENST00000614616 TAF10Q12962 218 aa13.02□□□□□ -0.32
CHD1-212ENST00000614616 RAB31Q13636 194 aa13.02□□□□□ -0.32
CHD1-212ENST00000614616 OR4D1Q15615 310 aa13.02□□□□□ -0.32
CHD1-212ENST00000614616 ADAM5Q6NVV9 412 aa13.02□□□□□ -0.32
CHD1-212ENST00000614616 ZC3H14Q6PJT7 736 aaKnown RBP13.02□□□□□ -0.32
CHD1-212ENST00000614616 P4HA3Q7Z4N8 544 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms