RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 PABPC4LP0CB38 370 aaKnown RBP13.48□□□□□ -0.25
CD48-203ENST00000613788 NCK1P16333 377 aa13.48□□□□□ -0.25
CD48-203ENST00000613788 RPS4Y1P22090 263 aaKnown RBP13.48□□□□□ -0.25
CD48-203ENST00000613788 TNFSF10P50591 281 aa13.48□□□□□ -0.25
CD48-203ENST00000613788 ELOAQ14241 798 aaKnown RBP13.48□□□□□ -0.25
CD48-203ENST00000613788 MAPK14Q16539 360 aa13.48□□□□□ -0.25
CD48-203ENST00000613788 ST3GAL2Q16842 350 aa13.48□□□□□ -0.25
CD48-203ENST00000613788 ZSWIM7Q19AV6 140 aa13.48□□□□□ -0.25
CD48-203ENST00000613788 LINC00303Q3SY05 128 aa13.48□□□□□ -0.25
CD48-203ENST00000613788 LIN52Q52LA3 116 aa13.48□□□□□ -0.25
CD48-203ENST00000613788 LRRC23Q53EV4 343 aaPredicted RBP13.48□□□□□ -0.25
CD48-203ENST00000613788 ZNF311Q5JNZ3 666 aa13.48□□□□□ -0.25
CD48-203ENST00000613788 PDZK1Q5T2W1 519 aa13.48□□□□□ -0.25
CD48-203ENST00000613788 SLC25A25Q6KCM7 469 aa13.48□□□□□ -0.25
CD48-203ENST00000613788 SLC30A6Q6NXT4 461 aa13.48□□□□□ -0.25
CD48-203ENST00000613788 MDGA2Q7Z553 956 aa13.48□□□□□ -0.25
CD48-203ENST00000613788 ZNF227Q86WZ6 799 aa13.48□□□□□ -0.25
CD48-203ENST00000613788 DHFR2Q86XF0 187 aa13.48□□□□□ -0.25
CD48-203ENST00000613788 POGLUT1Q8NBL1 392 aa13.48□□□□□ -0.25
CD48-203ENST00000613788 PSD4Q8NDX1 1056 aa13.48□□□□□ -0.25
CD48-203ENST00000613788 GRHL3Q8TE85 626 aa13.48□□□□□ -0.25
CD48-203ENST00000613788 RNF138Q8WVD3 245 aa13.48□□□□□ -0.25
CD48-203ENST00000613788 WDR60Q8WVS4 1066 aa13.48□□□□□ -0.25
CD48-203ENST00000613788 NSMCE2Q96MF7 247 aa13.48□□□□□ -0.25
CD48-203ENST00000613788 C5orf34Q96MH7 638 aa13.48□□□□□ -0.25
CD48-203ENST00000613788 FLRT3Q9NZU0 649 aa13.48□□□□□ -0.25
CD48-203ENST00000613788 KCNE5Q9UJ90 142 aa13.48□□□□□ -0.25
CD48-203ENST00000613788 CNOT11Q9UKZ1 510 aaKnown RBP13.48□□□□□ -0.25
CD48-203ENST00000613788 ANKRD11Q6UB99 2663 aaPredicted RBP13.48□□□□□ -0.25
CD48-203ENST00000613788 LOC400499M0QZD8 3231 aa13.48□□□□□ -0.25
CD48-203ENST00000613788 SERINC4A6NH21 518 aa13.47□□□□□ -0.25
CD48-203ENST00000613788 ARPC2O15144 300 aa13.47□□□□□ -0.25
CD48-203ENST00000613788 NDUFB5O43674 189 aa13.47□□□□□ -0.25
CD48-203ENST00000613788 DPM1O60762 260 aa13.47□□□□□ -0.25
CD48-203ENST00000613788 SNX4O95219 450 aa13.47□□□□□ -0.25
CD48-203ENST00000613788 SP1P08047 785 aa13.47□□□□□ -0.25
CD48-203ENST00000613788 CCL3P10147 92 aa13.47□□□□□ -0.25
CD48-203ENST00000613788 NID1P14543 1247 aa13.47□□□□□ -0.25
CD48-203ENST00000613788 CNR1P21554 472 aa13.47□□□□□ -0.25
CD48-203ENST00000613788 ADH7P40394 386 aa13.47□□□□□ -0.25
CD48-203ENST00000613788 KCNJ10P78508 379 aa13.47□□□□□ -0.25
CD48-203ENST00000613788 MS4A2Q01362 244 aa13.47□□□□□ -0.25
CD48-203ENST00000613788 COL28A1Q2UY09 1125 aa13.47□□□□□ -0.25
CD48-203ENST00000613788 EIF3MQ7L2H7 374 aaKnown RBP13.47□□□□□ -0.25
CD48-203ENST00000613788 MISPQ8IVT2 679 aa13.47□□□□□ -0.25
CD48-203ENST00000613788 CMIPQ8IY22 773 aa13.47□□□□□ -0.25
CD48-203ENST00000613788 MDS2Q8NDY4 140 aa13.47□□□□□ -0.25
CD48-203ENST00000613788 OR52E4Q8NGH9 312 aa13.47□□□□□ -0.25
CD48-203ENST00000613788 LZICQ8WZA0 190 aa13.47□□□□□ -0.25
CD48-203ENST00000613788 LRGUKQ96M69 825 aa13.47□□□□□ -0.25
CD48-203ENST00000613788 RNF145Q96MT1 663 aa13.47□□□□□ -0.25
CD48-203ENST00000613788 OSBPL11Q9BXB4 747 aa13.47□□□□□ -0.25
CD48-203ENST00000613788 ANGPTL4Q9BY76 406 aa13.47□□□□□ -0.25
CD48-203ENST00000613788 TRIM15Q9C019 465 aa13.47□□□□□ -0.25
CD48-203ENST00000613788 ADPRHL2Q9NX46 363 aa13.47□□□□□ -0.25
CD48-203ENST00000613788 SLC7A8Q9UHI5 535 aa13.47□□□□□ -0.25
CD48-203ENST00000613788 RPS6KA6Q9UK32 745 aa13.47□□□□□ -0.25
CD48-203ENST00000613788 POMPQ9Y244 141 aa13.47□□□□□ -0.25
CD48-203ENST00000613788 ZNF443Q9Y2A4 671 aaPredicted RBP13.47□□□□□ -0.25
CD48-203ENST00000613788 SLC35A3Q9Y2D2 325 aa13.47□□□□□ -0.25
CD48-203ENST00000613788 PCDHGB6Q9Y5F9 930 aa13.47□□□□□ -0.25
CD48-203ENST00000613788 PTPRQQ9UMZ3 2332 aa13.47□□□□□ -0.25
CD48-203ENST00000613788 TRAV17A0A0B4J275 112 aa13.46□□□□□ -0.25
CD48-203ENST00000613788 GTPBP1O00178 669 aaKnown RBP13.46□□□□□ -0.25
CD48-203ENST00000613788 SCO2O43819 266 aa13.46□□□□□ -0.25
CD48-203ENST00000613788 CIB2O75838 187 aa13.46□□□□□ -0.25
CD48-203ENST00000613788 ANGPTL1O95841 491 aa13.46□□□□□ -0.25
CD48-203ENST00000613788 PRKAR1BP31321 381 aa13.46□□□□□ -0.25
CD48-203ENST00000613788 KCNJ2P63252 427 aa13.46□□□□□ -0.25
CD48-203ENST00000613788 C17orf67Q0P5P2 114 aa13.46□□□□□ -0.25
CD48-203ENST00000613788 FGFBP1Q14512 234 aa13.46□□□□□ -0.25
CD48-203ENST00000613788 MTX3Q5HYI7 312 aa13.46□□□□□ -0.25
CD48-203ENST00000613788 PRAMEF20Q5VT98 475 aa13.46□□□□□ -0.25
CD48-203ENST00000613788 APOOLQ6UXV4 268 aa13.46□□□□□ -0.25
CD48-203ENST00000613788 ZNF771Q7L3S4 317 aaPredicted RBP13.46□□□□□ -0.25
CD48-203ENST00000613788 HMGN2P46Q86SG4 172 aa13.46□□□□□ -0.25
CD48-203ENST00000613788 MARCH3Q86UD3 253 aa13.46□□□□□ -0.25
CD48-203ENST00000613788 PACS2Q86VP3 889 aa13.46□□□□□ -0.25
CD48-203ENST00000613788 VRK2Q86Y07 508 aa13.46□□□□□ -0.25
CD48-203ENST00000613788 EID3Q8N140 333 aa13.46□□□□□ -0.25
CD48-203ENST00000613788 TMEM178AQ8NBL3 297 aa13.46□□□□□ -0.25
CD48-203ENST00000613788 CATSPER1Q8NEC5 780 aa13.46□□□□□ -0.25
CD48-203ENST00000613788 C9orf43Q8TAL5 461 aaPredicted RBP13.46□□□□□ -0.25
CD48-203ENST00000613788 PHOSPHO1Q8TCT1 267 aa13.46□□□□□ -0.25
CD48-203ENST00000613788 POP5Q969H6 163 aaKnown RBP13.46□□□□□ -0.25
CD48-203ENST00000613788 TAMM41Q96BW9 452 aa13.46□□□□□ -0.25
CD48-203ENST00000613788 DOHHQ9BU89 302 aa13.46□□□□□ -0.25
CD48-203ENST00000613788 PINK1Q9BXM7 581 aa13.46□□□□□ -0.25
CD48-203ENST00000613788 SLC13A4Q9UKG4 626 aa13.46□□□□□ -0.25
CD48-203ENST00000613788 BAG5Q9UL15 447 aa13.46□□□□□ -0.25
CD48-203ENST00000613788 KLF13Q9Y2Y9 288 aaPredicted RBP13.46□□□□□ -0.25
CD48-203ENST00000613788 CENPVL1A0A0U1RR11 272 aa13.45□□□□□ -0.26
CD48-203ENST00000613788 CFAP73A6NFT4 308 aa13.45□□□□□ -0.26
CD48-203ENST00000613788 KLRC4-KLRK1H3BQV0 150 aa13.45□□□□□ -0.26
CD48-203ENST00000613788 ACOT8O14734 319 aa13.45□□□□□ -0.26
CD48-203ENST00000613788 SUV39H1O43463 412 aa13.45□□□□□ -0.26
CD48-203ENST00000613788 SERPINA1P01009 418 aa13.45□□□□□ -0.26
CD48-203ENST00000613788 CSTAP01040 98 aa13.45□□□□□ -0.26
CD48-203ENST00000613788 OPN1SWP03999 348 aa13.45□□□□□ -0.26
CD48-203ENST00000613788 C8BP07358 591 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms