RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 LARS2Q15031 903 aaKnown RBP13.1□□□□□ -0.31
PCDHGA3-202ENST00000612467 DCST2Q5T1A1 773 aa13.1□□□□□ -0.31
PCDHGA3-202ENST00000612467 NXNL2Q5VZ03 156 aa13.1□□□□□ -0.31
PCDHGA3-202ENST00000612467 PLBD1Q6P4A8 553 aa13.1□□□□□ -0.31
PCDHGA3-202ENST00000612467 NRARPQ7Z6K4 114 aa13.1□□□□□ -0.31
PCDHGA3-202ENST00000612467 LAPTM4BQ86VI4 370 aa13.1□□□□□ -0.31
PCDHGA3-202ENST00000612467 METTL27Q8N6F8 245 aaPredicted RBP13.1□□□□□ -0.31
PCDHGA3-202ENST00000612467 DNAJC5GQ8N7S2 189 aa13.1□□□□□ -0.31
PCDHGA3-202ENST00000612467 OR51G2Q8NGK0 314 aa13.1□□□□□ -0.31
PCDHGA3-202ENST00000612467 RLN3Q8WXF3 142 aa13.1□□□□□ -0.31
PCDHGA3-202ENST00000612467 CDCA3Q99618 268 aaPredicted RBP13.1□□□□□ -0.31
PCDHGA3-202ENST00000612467 ZFYVE21Q9BQ24 234 aa13.1□□□□□ -0.31
PCDHGA3-202ENST00000612467 KLHL3Q9UH77 587 aa13.1□□□□□ -0.31
PCDHGA3-202ENST00000612467 CD207Q9UJ71 328 aa13.1□□□□□ -0.31
PCDHGA3-202ENST00000612467 PAIP2BQ9ULR5 123 aaKnown RBP13.1□□□□□ -0.31
PCDHGA3-202ENST00000612467 CLCA2Q9UQC9 943 aa13.1□□□□□ -0.31
PCDHGA3-202ENST00000612467 ASNA1O43681 348 aa13.09□□□□□ -0.31
PCDHGA3-202ENST00000612467 CLUP10909 449 aa13.09□□□□□ -0.31
PCDHGA3-202ENST00000612467 ENDOUP21128 410 aaKnown RBP13.09□□□□□ -0.31
PCDHGA3-202ENST00000612467 GABRA3P34903 492 aa13.09□□□□□ -0.31
PCDHGA3-202ENST00000612467 RORCP51449 518 aa13.09□□□□□ -0.31
PCDHGA3-202ENST00000612467 EEF1A1P68104 462 aaKnown RBP13.09□□□□□ -0.31
PCDHGA3-202ENST00000612467 DAB2P98082 770 aa13.09□□□□□ -0.31
PCDHGA3-202ENST00000612467 ADAM15Q13444 863 aa13.09□□□□□ -0.31
PCDHGA3-202ENST00000612467 KIR2DS3Q14952 304 aa13.09□□□□□ -0.31
PCDHGA3-202ENST00000612467 TMEM184AQ6ZMB5 413 aa13.09□□□□□ -0.31
PCDHGA3-202ENST00000612467 ZNF620Q6ZNG0 422 aa13.09□□□□□ -0.31
PCDHGA3-202ENST00000612467 PEX5LQ8IYB4 626 aa13.09□□□□□ -0.31
PCDHGA3-202ENST00000612467 COX18Q8N8Q8 333 aa13.09□□□□□ -0.31
PCDHGA3-202ENST00000612467 DTX3Q8N9I9 347 aa13.09□□□□□ -0.31
PCDHGA3-202ENST00000612467 OR9A4Q8NGU2 314 aa13.09□□□□□ -0.31
PCDHGA3-202ENST00000612467 PTCHD1Q96NR3 888 aa13.09□□□□□ -0.31
PCDHGA3-202ENST00000612467 SLC38A2Q96QD8 506 aa13.09□□□□□ -0.31
PCDHGA3-202ENST00000612467 TRIM45Q9H8W5 580 aaPredicted RBP13.09□□□□□ -0.31
PCDHGA3-202ENST00000612467 USP36Q9P275 1121 aaKnown RBP13.09□□□□□ -0.31
PCDHGA3-202ENST00000612467 PLEKHB1Q9UF11 243 aaPredicted RBP13.09□□□□□ -0.31
PCDHGA3-202ENST00000612467 FBXL4Q9UKA2 621 aa13.09□□□□□ -0.31
PCDHGA3-202ENST00000612467 CYP8B1Q9UNU6 501 aa13.09□□□□□ -0.31
PCDHGA3-202ENST00000612467 SF3B6Q9Y3B4 125 aaKnown RBP13.09□□□□□ -0.31
PCDHGA3-202ENST00000612467 A3GALT2U3KPV4 340 aa13.09□□□□□ -0.31
PCDHGA3-202ENST00000612467 CD8B2A6NJW9 211 aa13.09□□□□□ -0.31
PCDHGA3-202ENST00000612467 RFPL3O75679 317 aa13.09□□□□□ -0.31
PCDHGA3-202ENST00000612467 CD8BP10966 210 aa13.09□□□□□ -0.31
PCDHGA3-202ENST00000612467 CPEP16870 476 aa13.09□□□□□ -0.31
PCDHGA3-202ENST00000612467 CELP19835 753 aa13.09□□□□□ -0.31
PCDHGA3-202ENST00000612467 LTBRP36941 435 aa13.09□□□□□ -0.31
PCDHGA3-202ENST00000612467 SLC1A3P43003 542 aa13.09□□□□□ -0.31
PCDHGA3-202ENST00000612467 TSFMP43897 325 aaKnown RBP13.09□□□□□ -0.31
PCDHGA3-202ENST00000612467 PGGHGQ32M88 737 aa13.09□□□□□ -0.31
PCDHGA3-202ENST00000612467 ARHGAP11BQ3KRB8 267 aa13.09□□□□□ -0.31
PCDHGA3-202ENST00000612467 MINDY4Q4G0A6 757 aa13.09□□□□□ -0.31
PCDHGA3-202ENST00000612467 FHL5Q5TD97 284 aa13.09□□□□□ -0.31
PCDHGA3-202ENST00000612467 TUBA3EQ6PEY2 450 aa13.09□□□□□ -0.31
PCDHGA3-202ENST00000612467 THSD4Q6ZMP0 1018 aa13.09□□□□□ -0.31
PCDHGA3-202ENST00000612467 MTHFD2LQ9H903 347 aaPredicted RBP13.09□□□□□ -0.31
PCDHGA3-202ENST00000612467 NDRG2Q9UN36 371 aaKnown RBP13.09□□□□□ -0.31
PCDHGA3-202ENST00000612467 VPS13AQ96RL7 3174 aa13.09□□□□□ -0.31
PCDHGA3-202ENST00000612467 TRAV27A0A087WT01 109 aa13.08□□□□□ -0.32
PCDHGA3-202ENST00000612467 A0A1W2PQL4 384 aaPredicted RBP13.08□□□□□ -0.32
PCDHGA3-202ENST00000612467 SAGE2PA6NJ88 616 aa13.08□□□□□ -0.32
PCDHGA3-202ENST00000612467 A8MV72 311 aaPredicted RBP13.08□□□□□ -0.32
PCDHGA3-202ENST00000612467 KDM4EB2RXH2 506 aaPredicted RBP13.08□□□□□ -0.32
PCDHGA3-202ENST00000612467 KLF4O43474 513 aa13.08□□□□□ -0.32
PCDHGA3-202ENST00000612467 MRPL3P09001 348 aaKnown RBP13.08□□□□□ -0.32
PCDHGA3-202ENST00000612467 ST6GAL1P15907 406 aa13.08□□□□□ -0.32
PCDHGA3-202ENST00000612467 ATP6V1E1P36543 226 aa13.08□□□□□ -0.32
PCDHGA3-202ENST00000612467 PSPHP78330 225 aa13.08□□□□□ -0.32
PCDHGA3-202ENST00000612467 MAT1AQ00266 395 aaKnown RBP13.08□□□□□ -0.32
PCDHGA3-202ENST00000612467 ZNF155Q12901 538 aaPredicted RBP13.08□□□□□ -0.32
PCDHGA3-202ENST00000612467 DUSP8Q13202 625 aa13.08□□□□□ -0.32
PCDHGA3-202ENST00000612467 C3orf38Q5JPI3 329 aa13.08□□□□□ -0.32
PCDHGA3-202ENST00000612467 AADACL4Q5VUY2 407 aa13.08□□□□□ -0.32
PCDHGA3-202ENST00000612467 TMPRSS11AQ6ZMR5 421 aa13.08□□□□□ -0.32
PCDHGA3-202ENST00000612467 MBOAT2Q6ZWT7 520 aa13.08□□□□□ -0.32
PCDHGA3-202ENST00000612467 USP53Q70EK8 1073 aa13.08□□□□□ -0.32
PCDHGA3-202ENST00000612467 MINDY2Q8NBR6 621 aa13.08□□□□□ -0.32
PCDHGA3-202ENST00000612467 OR13C2Q8NGS9 318 aa13.08□□□□□ -0.32
PCDHGA3-202ENST00000612467 SPRYD4Q8WW59 207 aaPredicted RBP13.08□□□□□ -0.32
PCDHGA3-202ENST00000612467 RERGQ96A58 199 aaPredicted RBP13.08□□□□□ -0.32
PCDHGA3-202ENST00000612467 SECISBP2Q96T21 854 aaKnown RBP13.08□□□□□ -0.32
PCDHGA3-202ENST00000612467 MAT2BQ9NZL9 334 aa13.08□□□□□ -0.32
PCDHGA3-202ENST00000612467 PHF11Q9UIL8 331 aa13.08□□□□□ -0.32
PCDHGA3-202ENST00000612467 PCOLCE2Q9UKZ9 415 aa13.08□□□□□ -0.32
PCDHGA3-202ENST00000612467 CBLCQ9ULV8 474 aa13.08□□□□□ -0.32
PCDHGA3-202ENST00000612467 DTX4Q9Y2E6 619 aa13.08□□□□□ -0.32
PCDHGA3-202ENST00000612467 CYR61O00622 381 aa13.08□□□□□ -0.32
PCDHGA3-202ENST00000612467 REM1O75628 298 aa13.08□□□□□ -0.32
PCDHGA3-202ENST00000612467 GYPBP06028 91 aa13.08□□□□□ -0.32
PCDHGA3-202ENST00000612467 IFI30P13284 250 aa13.08□□□□□ -0.32
PCDHGA3-202ENST00000612467 FPR3P25089 353 aa13.08□□□□□ -0.32
PCDHGA3-202ENST00000612467 NDUFS1P28331 727 aa13.08□□□□□ -0.32
PCDHGA3-202ENST00000612467 NR4A2P43354 598 aa13.08□□□□□ -0.32
PCDHGA3-202ENST00000612467 RAB40BQ12829 278 aa13.08□□□□□ -0.32
PCDHGA3-202ENST00000612467 ILF3Q12906 894 aaKnown RBP eCLIP13.08□□□□□ -0.32
PCDHGA3-202ENST00000612467 OR1Q1Q15612 314 aa13.08□□□□□ -0.32
PCDHGA3-202ENST00000612467 DECR1Q16698 335 aa13.08□□□□□ -0.32
PCDHGA3-202ENST00000612467 NDUFAF6Q330K2 333 aa13.08□□□□□ -0.32
PCDHGA3-202ENST00000612467 KLHL22Q53GT1 634 aa13.08□□□□□ -0.32
PCDHGA3-202ENST00000612467 KLBQ86Z14 1044 aa13.08□□□□□ -0.32
PCDHGA3-202ENST00000612467 GHDCQ8N2G8 530 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms