RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 GRAMD2AQ8IUY3 354 aa11.19□□□□□ -0.62
CBWD3-208ENST00000612050 ZNF614Q8N883 585 aa11.19□□□□□ -0.62
CBWD3-208ENST00000612050 FADS6Q8N9I5 356 aa11.19□□□□□ -0.62
CBWD3-208ENST00000612050 OR5AK3PQ8NH89 298 aa11.19□□□□□ -0.62
CBWD3-208ENST00000612050 RNF138Q8WVD3 245 aa11.19□□□□□ -0.62
CBWD3-208ENST00000612050 C16orf58Q96GQ5 468 aa11.19□□□□□ -0.62
CBWD3-208ENST00000612050 VIPAS39Q9H9C1 493 aa11.19□□□□□ -0.62
CBWD3-208ENST00000612050 Q9UFV3 132 aa11.19□□□□□ -0.62
CBWD3-208ENST00000612050 FOXD3Q9UJU5 478 aaPredicted RBP11.19□□□□□ -0.62
CBWD3-208ENST00000612050 SETXQ7Z333 2677 aaKnown RBP11.19□□□□□ -0.62
CBWD3-208ENST00000612050 GOLGA8QA0A0J9YX86 632 aa11.18□□□□□ -0.62
CBWD3-208ENST00000612050 GOLGA8OA6NCC3 632 aa11.18□□□□□ -0.62
CBWD3-208ENST00000612050 NKX2-6A6NCS4 301 aa11.18□□□□□ -0.62
CBWD3-208ENST00000612050 GOLGA8NF8WBI6 632 aa11.18□□□□□ -0.62
CBWD3-208ENST00000612050 H3BML4 177 aa11.18□□□□□ -0.62
CBWD3-208ENST00000612050 SDHDO14521 159 aa11.18□□□□□ -0.62
CBWD3-208ENST00000612050 GMFGO60234 142 aa11.18□□□□□ -0.62
CBWD3-208ENST00000612050 DIAPH2O60879 1101 aa11.18□□□□□ -0.62
CBWD3-208ENST00000612050 ANP32DO95626 131 aa11.18□□□□□ -0.62
CBWD3-208ENST00000612050 BMP5P22003 454 aa11.18□□□□□ -0.62
CBWD3-208ENST00000612050 EPHA3P29320 983 aa11.18□□□□□ -0.62
CBWD3-208ENST00000612050 MAP3K8P41279 467 aa11.18□□□□□ -0.62
CBWD3-208ENST00000612050 ASCL1P50553 236 aa11.18□□□□□ -0.62
CBWD3-208ENST00000612050 GFRA1P56159 465 aa11.18□□□□□ -0.62
CBWD3-208ENST00000612050 TXNL4AP83876 142 aaKnown RBP11.18□□□□□ -0.62
CBWD3-208ENST00000612050 OCRLQ01968 901 aa11.18□□□□□ -0.62
CBWD3-208ENST00000612050 SGCBQ16585 318 aa11.18□□□□□ -0.62
CBWD3-208ENST00000612050 GSTA3Q16772 222 aa11.18□□□□□ -0.62
CBWD3-208ENST00000612050 FAM174BQ3ZCQ3 159 aa11.18□□□□□ -0.62
CBWD3-208ENST00000612050 PDSS1Q5T2R2 415 aa11.18□□□□□ -0.62
CBWD3-208ENST00000612050 C6orf120Q7Z4R8 191 aa11.18□□□□□ -0.62
CBWD3-208ENST00000612050 GALNT10Q86SR1 603 aa11.18□□□□□ -0.62
CBWD3-208ENST00000612050 UBQLNLQ8IYU4 475 aa11.18□□□□□ -0.62
CBWD3-208ENST00000612050 FAM110BQ8TC76 370 aa11.18□□□□□ -0.62
CBWD3-208ENST00000612050 PHOSPHO1Q8TCT1 267 aa11.18□□□□□ -0.62
CBWD3-208ENST00000612050 ZNF75CPQ92670 426 aaPredicted RBP11.18□□□□□ -0.62
CBWD3-208ENST00000612050 ZBTB8AQ96BR9 441 aa11.18□□□□□ -0.62
CBWD3-208ENST00000612050 C1GALT1C1Q96EU7 318 aa11.18□□□□□ -0.62
CBWD3-208ENST00000612050 OTUB1Q96FW1 271 aaPredicted RBP11.18□□□□□ -0.62
CBWD3-208ENST00000612050 OR7D2Q96RA2 312 aa11.18□□□□□ -0.62
CBWD3-208ENST00000612050 PANX1Q96RD7 426 aa11.18□□□□□ -0.62
CBWD3-208ENST00000612050 UCK2Q9BZX2 261 aa11.18□□□□□ -0.62
CBWD3-208ENST00000612050 RMND5AQ9H871 391 aa11.18□□□□□ -0.62
CBWD3-208ENST00000612050 AIG1Q9NVV5 245 aa11.18□□□□□ -0.62
CBWD3-208ENST00000612050 PAQR5Q9NXK6 330 aaPredicted RBP11.18□□□□□ -0.62
CBWD3-208ENST00000612050 AP4B1Q9Y6B7 739 aa11.18□□□□□ -0.62
CBWD3-208ENST00000612050 IGLV3-32A0A0A0MS00 114 aa11.18□□□□□ -0.62
CBWD3-208ENST00000612050 MBD3L4A6NDZ8 208 aaPredicted RBP11.18□□□□□ -0.62
CBWD3-208ENST00000612050 MBD3L3A6NE82 208 aaPredicted RBP11.18□□□□□ -0.62
CBWD3-208ENST00000612050 MBD3L5A6NJ08 208 aaPredicted RBP11.18□□□□□ -0.62
CBWD3-208ENST00000612050 POLR3GO15318 223 aaPredicted RBP11.18□□□□□ -0.62
CBWD3-208ENST00000612050 HCRTR2O43614 444 aa11.18□□□□□ -0.62
CBWD3-208ENST00000612050 STX11O75558 287 aa11.18□□□□□ -0.62
CBWD3-208ENST00000612050 IL6P05231 212 aa11.18□□□□□ -0.62
CBWD3-208ENST00000612050 TMIGD3P0DMS9 266 aaPredicted RBP11.18□□□□□ -0.62
CBWD3-208ENST00000612050 FCGR2AP12318 317 aa11.18□□□□□ -0.62
CBWD3-208ENST00000612050 ZNF17P17021 662 aa11.18□□□□□ -0.62
CBWD3-208ENST00000612050 CTSSP25774 331 aa11.18□□□□□ -0.62
CBWD3-208ENST00000612050 UQCRC1P31930 480 aa11.18□□□□□ -0.62
CBWD3-208ENST00000612050 EIF1P41567 113 aaKnown RBP11.18□□□□□ -0.62
CBWD3-208ENST00000612050 KHKP50053 298 aa11.18□□□□□ -0.62
CBWD3-208ENST00000612050 NME5P56597 212 aa11.18□□□□□ -0.62
CBWD3-208ENST00000612050 MYBPHQ13203 477 aa11.18□□□□□ -0.62
CBWD3-208ENST00000612050 SPANXN4Q5MJ08 99 aa11.18□□□□□ -0.62
CBWD3-208ENST00000612050 CCNJQ5T5M9 372 aa11.18□□□□□ -0.62
CBWD3-208ENST00000612050 ANKRD46Q86W74 232 aa11.18□□□□□ -0.62
CBWD3-208ENST00000612050 KIF18BQ86Y91 864 aa11.18□□□□□ -0.62
CBWD3-208ENST00000612050 CLECL1Q8IZS7 167 aa11.18□□□□□ -0.62
CBWD3-208ENST00000612050 GATSQ8NAP1 163 aa11.18□□□□□ -0.62
CBWD3-208ENST00000612050 OR4C3Q8NH37 302 aa11.18□□□□□ -0.62
CBWD3-208ENST00000612050 B4GALNT2Q8NHY0 566 aa11.18□□□□□ -0.62
CBWD3-208ENST00000612050 MBD3L2Q8NHZ7 208 aaPredicted RBP11.18□□□□□ -0.62
CBWD3-208ENST00000612050 ACTRT2Q8TDY3 377 aa11.18□□□□□ -0.62
CBWD3-208ENST00000612050 SMPDL3BQ92485 455 aa11.18□□□□□ -0.62
CBWD3-208ENST00000612050 WNT2BQ93097 391 aa11.18□□□□□ -0.62
CBWD3-208ENST00000612050 OR52E6Q96RD3 313 aa11.18□□□□□ -0.62
CBWD3-208ENST00000612050 PRRG4Q9BZD6 226 aa11.18□□□□□ -0.62
CBWD3-208ENST00000612050 WDR55Q9H6Y2 383 aaPredicted RBP11.18□□□□□ -0.62
CBWD3-208ENST00000612050 CACYBPQ9HB71 228 aaKnown RBP11.18□□□□□ -0.62
CBWD3-208ENST00000612050 INTS9Q9NV88 658 aaKnown RBP11.18□□□□□ -0.62
CBWD3-208ENST00000612050 FLRT3Q9NZU0 649 aa11.18□□□□□ -0.62
CBWD3-208ENST00000612050 BTNL2Q9UIR0 455 aa11.18□□□□□ -0.62
CBWD3-208ENST00000612050 VDAC3Q9Y277 283 aa11.18□□□□□ -0.62
CBWD3-208ENST00000612050 TMEM247A6NEH6 219 aa11.17□□□□□ -0.62
CBWD3-208ENST00000612050 CLCA1A8K7I4 914 aa11.17□□□□□ -0.62
CBWD3-208ENST00000612050 EEF1E1-BLOC1S5C9J1V9 151 aa11.17□□□□□ -0.62
CBWD3-208ENST00000612050 UBDO15205 165 aa11.17□□□□□ -0.62
CBWD3-208ENST00000612050 SEC14L5O43304 696 aa11.17□□□□□ -0.62
CBWD3-208ENST00000612050 EEF1E1O43324 174 aaKnown RBP11.17□□□□□ -0.62
CBWD3-208ENST00000612050 SLC22A3O75751 556 aa11.17□□□□□ -0.62
CBWD3-208ENST00000612050 TOXO94900 526 aa11.17□□□□□ -0.62
CBWD3-208ENST00000612050 TGDSO95455 350 aa11.17□□□□□ -0.62
CBWD3-208ENST00000612050 IL18BPO95998 194 aa11.17□□□□□ -0.62
CBWD3-208ENST00000612050 IGKV1D-16P01601 117 aa11.17□□□□□ -0.62
CBWD3-208ENST00000612050 PGRP06401 933 aa11.17□□□□□ -0.62
CBWD3-208ENST00000612050 ZNF708P17019 499 aa11.17□□□□□ -0.62
CBWD3-208ENST00000612050 CEACAM8P31997 349 aaPredicted RBP11.17□□□□□ -0.62
CBWD3-208ENST00000612050 ADH7P40394 386 aa11.17□□□□□ -0.62
CBWD3-208ENST00000612050 CPA2P48052 419 aa11.17□□□□□ -0.62
CBWD3-208ENST00000612050 LHX2P50458 406 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms