RNA–Protein interactions for RNA: ENST00000611897.1

HMGB1P24-201, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 328 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-201ENST00000611897 STK32CQ86UX6 486 aa11.96□□□□□ -0.49
HMGB1P24-201ENST00000611897 WDR75Q8IWA0 830 aaKnown RBP11.96□□□□□ -0.49
HMGB1P24-201ENST00000611897 MAPK1IP1LQ8NDC0 245 aa11.96□□□□□ -0.49
HMGB1P24-201ENST00000611897 JADE3Q92613 823 aa11.96□□□□□ -0.49
HMGB1P24-201ENST00000611897 CIDECQ96AQ7 238 aaPredicted RBP11.96□□□□□ -0.49
HMGB1P24-201ENST00000611897 GMPPAQ96IJ6 420 aaPredicted RBP11.96□□□□□ -0.49
HMGB1P24-201ENST00000611897 EGLN2Q96KS0 407 aa11.96□□□□□ -0.49
HMGB1P24-201ENST00000611897 RNF145Q96MT1 663 aa11.96□□□□□ -0.49
HMGB1P24-201ENST00000611897 LMF2Q9BU23 707 aaKnown RBP11.96□□□□□ -0.49
HMGB1P24-201ENST00000611897 REPIN1Q9BWE0 567 aaKnown RBP11.96□□□□□ -0.49
HMGB1P24-201ENST00000611897 GRID1Q9ULK0 1009 aa11.96□□□□□ -0.49
HMGB1P24-201ENST00000611897 PTGDR2Q9Y5Y4 395 aa11.96□□□□□ -0.49
HMGB1P24-201ENST00000611897 FREM1Q5H8C1 2179 aa11.96□□□□□ -0.5
HMGB1P24-201ENST00000611897 CHD3Q12873 2000 aaKnown RBP11.96□□□□□ -0.5
HMGB1P24-201ENST00000611897 FBN3Q75N90 2809 aa11.96□□□□□ -0.5
HMGB1P24-201ENST00000611897 HS3ST1O14792 307 aa11.95□□□□□ -0.5
HMGB1P24-201ENST00000611897 KLF4O43474 513 aa11.95□□□□□ -0.5
HMGB1P24-201ENST00000611897 SEC22BO75396 215 aa11.95□□□□□ -0.5
HMGB1P24-201ENST00000611897 PSMG1O95456 288 aa11.95□□□□□ -0.5
HMGB1P24-201ENST00000611897 OXSR1O95747 527 aaPredicted RBP11.95□□□□□ -0.5
HMGB1P24-201ENST00000611897 PRPS2P11908 318 aa11.95□□□□□ -0.5
HMGB1P24-201ENST00000611897 PRR5P85299 388 aa11.95□□□□□ -0.5
HMGB1P24-201ENST00000611897 SLC18A2Q05940 514 aa11.95□□□□□ -0.5
HMGB1P24-201ENST00000611897 CAPRIN1Q14444 709 aaKnown RBP11.95□□□□□ -0.5
HMGB1P24-201ENST00000611897 TSC22D1Q15714 1073 aa11.95□□□□□ -0.5
HMGB1P24-201ENST00000611897 CFAP157Q5JU67 520 aa11.95□□□□□ -0.5
HMGB1P24-201ENST00000611897 HBMQ6B0K9 141 aa11.95□□□□□ -0.5
HMGB1P24-201ENST00000611897 NOXRED1Q6NXP6 359 aa11.95□□□□□ -0.5
HMGB1P24-201ENST00000611897 TIFABQ6ZNK6 161 aa11.95□□□□□ -0.5
HMGB1P24-201ENST00000611897 ZAR1Q86SH2 424 aa11.95□□□□□ -0.5
HMGB1P24-201ENST00000611897 CCDC63Q8NA47 563 aa11.95□□□□□ -0.5
HMGB1P24-201ENST00000611897 CLHC1Q8NHS4 586 aa11.95□□□□□ -0.5
HMGB1P24-201ENST00000611897 C11orf24Q96F05 449 aaPredicted RBP11.95□□□□□ -0.5
HMGB1P24-201ENST00000611897 TACO1Q9BSH4 297 aaKnown RBP11.95□□□□□ -0.5
HMGB1P24-201ENST00000611897 FANCFQ9NPI8 374 aa11.95□□□□□ -0.5
HMGB1P24-201ENST00000611897 RRAGDQ9NQL2 400 aaPredicted RBP11.95□□□□□ -0.5
HMGB1P24-201ENST00000611897 LAMP3Q9UQV4 416 aa11.95□□□□□ -0.5
HMGB1P24-201ENST00000611897 ABCA1O95477 2261 aa11.95□□□□□ -0.5
HMGB1P24-201ENST00000611897 CADP27708 2225 aa11.95□□□□□ -0.5
HMGB1P24-201ENST00000611897 A0A1W2PRB8 838 aa11.94□□□□□ -0.5
HMGB1P24-201ENST00000611897 SS18L1O75177 396 aaPredicted RBP11.94□□□□□ -0.5
HMGB1P24-201ENST00000611897 RSL1D1O76021 490 aaKnown RBP11.94□□□□□ -0.5
HMGB1P24-201ENST00000611897 NTN1O95631 604 aa11.94□□□□□ -0.5
HMGB1P24-201ENST00000611897 NUDT14O95848 222 aa11.94□□□□□ -0.5
HMGB1P24-201ENST00000611897 TUBBP07437 444 aa11.94□□□□□ -0.5
HMGB1P24-201ENST00000611897 ACP2P11117 423 aa11.94□□□□□ -0.5
HMGB1P24-201ENST00000611897 PPP3CBP16298 524 aa11.94□□□□□ -0.5
HMGB1P24-201ENST00000611897 ZNF17P17021 662 aa11.94□□□□□ -0.5
HMGB1P24-201ENST00000611897 ZNF844Q08AG5 666 aa11.94□□□□□ -0.5
HMGB1P24-201ENST00000611897 TNK1Q13470 666 aa11.94□□□□□ -0.5
HMGB1P24-201ENST00000611897 SLC29A2Q14542 456 aa11.94□□□□□ -0.5
HMGB1P24-201ENST00000611897 GLYR1Q49A26 553 aaPredicted RBP11.94□□□□□ -0.5
HMGB1P24-201ENST00000611897 VPS26BQ4G0F5 336 aa11.94□□□□□ -0.5
HMGB1P24-201ENST00000611897 ZNF385BQ569K4 471 aa11.94□□□□□ -0.5
HMGB1P24-201ENST00000611897 CCNJQ5T5M9 372 aa11.94□□□□□ -0.5
HMGB1P24-201ENST00000611897 CLEC6AQ6EIG7 209 aa11.94□□□□□ -0.5
HMGB1P24-201ENST00000611897 IKBIPQ70UQ0 350 aa11.94□□□□□ -0.5
HMGB1P24-201ENST00000611897 LCA5Q86VQ0 697 aa11.94□□□□□ -0.5
HMGB1P24-201ENST00000611897 GTPBP8Q8N3Z3 284 aaPredicted RBP11.94□□□□□ -0.5
HMGB1P24-201ENST00000611897 COX18Q8N8Q8 333 aa11.94□□□□□ -0.5
HMGB1P24-201ENST00000611897 MNS1Q8NEH6 495 aa11.94□□□□□ -0.5
HMGB1P24-201ENST00000611897 ATP6V1C2Q8NEY4 427 aa11.94□□□□□ -0.5
HMGB1P24-201ENST00000611897 NUP43Q8NFH3 380 aa11.94□□□□□ -0.5
HMGB1P24-201ENST00000611897 OR4C3Q8NH37 302 aa11.94□□□□□ -0.5
HMGB1P24-201ENST00000611897 OR2V1Q8NHB1 315 aa11.94□□□□□ -0.5
HMGB1P24-201ENST00000611897 ZFP28Q8NHY6 868 aa11.94□□□□□ -0.5
HMGB1P24-201ENST00000611897 RAB3IL1Q8TBN0 382 aa11.94□□□□□ -0.5
HMGB1P24-201ENST00000611897 ROBO4Q8WZ75 1007 aa11.94□□□□□ -0.5
HMGB1P24-201ENST00000611897 AKAP1Q92667 903 aaKnown RBP eCLIP11.94□□□□□ -0.5
HMGB1P24-201ENST00000611897 PPCDCQ96CD2 204 aa11.94□□□□□ -0.5
HMGB1P24-201ENST00000611897 TSSK3Q96PN8 268 aa11.94□□□□□ -0.5
HMGB1P24-201ENST00000611897 KLHDC3Q9BQ90 382 aa11.94□□□□□ -0.5
HMGB1P24-201ENST00000611897 TNFRSF12AQ9NP84 129 aa11.94□□□□□ -0.5
HMGB1P24-201ENST00000611897 PLSCR4Q9NRQ2 329 aa11.94□□□□□ -0.5
HMGB1P24-201ENST00000611897 MED17Q9NVC6 651 aa11.94□□□□□ -0.5
HMGB1P24-201ENST00000611897 SH3BP4Q9P0V3 963 aa11.94□□□□□ -0.5
HMGB1P24-201ENST00000611897 PSMC3IPQ9P2W1 217 aaPredicted RBP11.94□□□□□ -0.5
HMGB1P24-201ENST00000611897 ADAM21Q9UKJ8 722 aa11.94□□□□□ -0.5
HMGB1P24-201ENST00000611897 IGLV3-32A0A0A0MS00 114 aa11.93□□□□□ -0.5
HMGB1P24-201ENST00000611897 A0A0J9YW62 118 aa11.93□□□□□ -0.5
HMGB1P24-201ENST00000611897 SMIM23A6NLE4 172 aa11.93□□□□□ -0.5
HMGB1P24-201ENST00000611897 ALG1L2C9J202 215 aa11.93□□□□□ -0.5
HMGB1P24-201ENST00000611897 RNF223E7ERA6 249 aa11.93□□□□□ -0.5
HMGB1P24-201ENST00000611897 RIPK2O43353 540 aa11.93□□□□□ -0.5
HMGB1P24-201ENST00000611897 ABHD2P08910 425 aa11.93□□□□□ -0.5
HMGB1P24-201ENST00000611897 IL32P24001 234 aa11.93□□□□□ -0.5
HMGB1P24-201ENST00000611897 SHC1P29353 583 aa11.93□□□□□ -0.5
HMGB1P24-201ENST00000611897 AGTR1P30556 359 aa11.93□□□□□ -0.5
HMGB1P24-201ENST00000611897 RPL38P63173 70 aaKnown RBP11.93□□□□□ -0.5
HMGB1P24-201ENST00000611897 FOXF1Q12946 379 aa11.93□□□□□ -0.5
HMGB1P24-201ENST00000611897 DUSP5Q16690 384 aa11.93□□□□□ -0.5
HMGB1P24-201ENST00000611897 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.93□□□□□ -0.5
HMGB1P24-201ENST00000611897 TMEM44Q2T9K0 475 aa11.93□□□□□ -0.5
HMGB1P24-201ENST00000611897 PLPPR5Q32ZL2 321 aa11.93□□□□□ -0.5
HMGB1P24-201ENST00000611897 GLE1Q53GS7 698 aaKnown RBP11.93□□□□□ -0.5
HMGB1P24-201ENST00000611897 PDSS1Q5T2R2 415 aa11.93□□□□□ -0.5
HMGB1P24-201ENST00000611897 ZYG11AQ6WRX3 759 aa11.93□□□□□ -0.5
HMGB1P24-201ENST00000611897 BEND4Q6ZU67 534 aa11.93□□□□□ -0.5
HMGB1P24-201ENST00000611897 FRMD7Q6ZUT3 714 aa11.93□□□□□ -0.5
HMGB1P24-201ENST00000611897 ZNF614Q8N883 585 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms