RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 OR2B3O76000 313 aa8.13□□□□□ -1.11
LIG4-204ENST00000611712 PEPDP12955 493 aa8.13□□□□□ -1.11
LIG4-204ENST00000611712 SPNP16150 400 aa8.13□□□□□ -1.11
LIG4-204ENST00000611712 GRK5P34947 590 aa8.13□□□□□ -1.11
LIG4-204ENST00000611712 PCBP3P57721 371 aaKnown RBP8.13□□□□□ -1.11
LIG4-204ENST00000611712 SNRPD2P62316 118 aaKnown RBP8.13□□□□□ -1.11
LIG4-204ENST00000611712 ACTC1P68032 377 aa8.13□□□□□ -1.11
LIG4-204ENST00000611712 ACTA1P68133 377 aa8.13□□□□□ -1.11
LIG4-204ENST00000611712 IFITM3Q01628 133 aa8.13□□□□□ -1.11
LIG4-204ENST00000611712 SELENBP1Q13228 472 aa8.13□□□□□ -1.11
LIG4-204ENST00000611712 SF3B4Q15427 424 aaKnown RBP eCLIP8.13□□□□□ -1.11
LIG4-204ENST00000611712 NTRK2Q16620 822 aa8.13□□□□□ -1.11
LIG4-204ENST00000611712 TATDN3Q17R31 274 aa8.13□□□□□ -1.11
LIG4-204ENST00000611712 DEFB110Q30KQ9 67 aa8.13□□□□□ -1.11
LIG4-204ENST00000611712 FAM111BQ6SJ93 734 aa8.13□□□□□ -1.11
LIG4-204ENST00000611712 CHMP1BQ7LBR1 199 aa8.13□□□□□ -1.11
LIG4-204ENST00000611712 NOXA1Q86UR1 476 aa8.13□□□□□ -1.11
LIG4-204ENST00000611712 TIGD4Q8IY51 512 aa8.13□□□□□ -1.11
LIG4-204ENST00000611712 ZNF619Q8N2I2 560 aa8.13□□□□□ -1.11
LIG4-204ENST00000611712 MFSD9Q8NBP5 474 aa8.13□□□□□ -1.11
LIG4-204ENST00000611712 OR5W2Q8NH69 310 aa8.13□□□□□ -1.11
LIG4-204ENST00000611712 PHOSPHO1Q8TCT1 267 aa8.13□□□□□ -1.11
LIG4-204ENST00000611712 WDR34Q96EX3 536 aa8.13□□□□□ -1.11
LIG4-204ENST00000611712 ADAD1Q96M93 576 aaKnown RBP8.13□□□□□ -1.11
LIG4-204ENST00000611712 ASB16Q96NS5 453 aa8.13□□□□□ -1.11
LIG4-204ENST00000611712 GAL3ST1Q99999 423 aa8.13□□□□□ -1.11
LIG4-204ENST00000611712 PSD2Q9BQI7 771 aa8.13□□□□□ -1.11
LIG4-204ENST00000611712 C11orf54Q9H0W9 315 aaPredicted RBP8.13□□□□□ -1.11
LIG4-204ENST00000611712 IL21RQ9HBE5 538 aa8.13□□□□□ -1.11
LIG4-204ENST00000611712 SEMA4GQ9NTN9 838 aa8.13□□□□□ -1.11
LIG4-204ENST00000611712 GPATCH2Q9NW75 528 aa8.13□□□□□ -1.11
LIG4-204ENST00000611712 SPHK1Q9NYA1 384 aa8.13□□□□□ -1.11
LIG4-204ENST00000611712 EIF3KQ9UBQ5 218 aaKnown RBP8.13□□□□□ -1.11
LIG4-204ENST00000611712 FBXL21Q9UKT6 434 aa8.13□□□□□ -1.11
LIG4-204ENST00000611712 BOLA1Q9Y3E2 137 aa8.13□□□□□ -1.11
LIG4-204ENST00000611712 MYOFQ9NZM1 2061 aa8.13□□□□□ -1.11
LIG4-204ENST00000611712 CACNA1CQ13936 2221 aa8.12□□□□□ -1.11
LIG4-204ENST00000611712 LOC102723532A0A0G2JNH3 316 aa8.12□□□□□ -1.11
LIG4-204ENST00000611712 TRBV2A0A0J9YWF9 115 aa8.12□□□□□ -1.11
LIG4-204ENST00000611712 A0A1B0GW55 424 aa8.12□□□□□ -1.11
LIG4-204ENST00000611712 A0A1W2PQ72 361 aa8.12□□□□□ -1.11
LIG4-204ENST00000611712 GXYLT2A0PJZ3 443 aa8.12□□□□□ -1.11
LIG4-204ENST00000611712 LINC01553A4QN01 128 aa8.12□□□□□ -1.11
LIG4-204ENST00000611712 MAN2B1O00754 1011 aa8.12□□□□□ -1.11
LIG4-204ENST00000611712 DSCR3O14972 297 aa8.12□□□□□ -1.11
LIG4-204ENST00000611712 IGHA2P01877 340 aa8.12□□□□□ -1.11
LIG4-204ENST00000611712 DUX4L2P0CJ85 424 aa8.12□□□□□ -1.11
LIG4-204ENST00000611712 DUX4L3P0CJ86 424 aa8.12□□□□□ -1.11
LIG4-204ENST00000611712 DUX4L4P0CJ87 422 aa8.12□□□□□ -1.11
LIG4-204ENST00000611712 DUX4L5P0CJ88 424 aa8.12□□□□□ -1.11
LIG4-204ENST00000611712 DUX4L6P0CJ89 424 aa8.12□□□□□ -1.11
LIG4-204ENST00000611712 DUX4L7P0CJ90 424 aa8.12□□□□□ -1.11
LIG4-204ENST00000611712 MYOGP15173 224 aa8.12□□□□□ -1.11
LIG4-204ENST00000611712 CFL1P23528 166 aaKnown RBP8.12□□□□□ -1.11
LIG4-204ENST00000611712 ERP29P30040 261 aaKnown RBP8.12□□□□□ -1.11
LIG4-204ENST00000611712 CD6P30203 668 aa8.12□□□□□ -1.11
LIG4-204ENST00000611712 PKLRP30613 574 aa8.12□□□□□ -1.11
LIG4-204ENST00000611712 PSMD4P55036 377 aaKnown RBP8.12□□□□□ -1.11
LIG4-204ENST00000611712 DCST2Q5T1A1 773 aa8.12□□□□□ -1.11
LIG4-204ENST00000611712 ZNF550Q7Z398 422 aa8.12□□□□□ -1.11
LIG4-204ENST00000611712 GPR135Q8IZ08 494 aa8.12□□□□□ -1.11
LIG4-204ENST00000611712 ADGRF3Q8IZF5 1079 aa8.12□□□□□ -1.11
LIG4-204ENST00000611712 METTL27Q8N6F8 245 aaPredicted RBP8.12□□□□□ -1.11
LIG4-204ENST00000611712 AMER3Q8N944 861 aa8.12□□□□□ -1.11
LIG4-204ENST00000611712 ZNF248Q8NDW4 579 aa8.12□□□□□ -1.11
LIG4-204ENST00000611712 OR2A1Q8NGT9 310 aa8.12□□□□□ -1.11
LIG4-204ENST00000611712 ZMYND19Q96E35 227 aaPredicted RBP8.12□□□□□ -1.11
LIG4-204ENST00000611712 RANGRFQ9HD47 186 aaPredicted RBP8.12□□□□□ -1.11
LIG4-204ENST00000611712 PNO1Q9NRX1 252 aaKnown RBP8.12□□□□□ -1.11
LIG4-204ENST00000611712 DZANK1Q9NVP4 752 aa8.12□□□□□ -1.11
LIG4-204ENST00000611712 NDUFB11Q9NX14 153 aa8.12□□□□□ -1.11
LIG4-204ENST00000611712 ACTR10Q9NZ32 417 aa8.12□□□□□ -1.11
LIG4-204ENST00000611712 DUX4Q9UBX2 424 aa8.12□□□□□ -1.11
LIG4-204ENST00000611712 NTNG1Q9Y2I2 539 aa8.12□□□□□ -1.11
LIG4-204ENST00000611712 SESN1Q9Y6P5 492 aa8.12□□□□□ -1.11
LIG4-204ENST00000611712 GREB1Q4ZG55 1949 aa8.12□□□□□ -1.11
LIG4-204ENST00000611712 TRAV27A0A087WT01 109 aa8.12□□□□□ -1.11
LIG4-204ENST00000611712 MCIDASD6RGH6 385 aa8.12□□□□□ -1.11
LIG4-204ENST00000611712 FCMRO60667 390 aa8.12□□□□□ -1.11
LIG4-204ENST00000611712 ITGA10O75578 1167 aa8.12□□□□□ -1.11
LIG4-204ENST00000611712 AK1P00568 194 aa8.12□□□□□ -1.11
LIG4-204ENST00000611712 RAB3BP20337 219 aa8.12□□□□□ -1.11
LIG4-204ENST00000611712 FAUP35544 74 aaKnown RBP8.12□□□□□ -1.11
LIG4-204ENST00000611712 MNDAP41218 407 aa8.12□□□□□ -1.11
LIG4-204ENST00000611712 SOX2P48431 317 aa8.12□□□□□ -1.11
LIG4-204ENST00000611712 BLKP51451 505 aa8.12□□□□□ -1.11
LIG4-204ENST00000611712 OR12D2P58182 307 aa8.12□□□□□ -1.11
LIG4-204ENST00000611712 OR1Q1Q15612 314 aa8.12□□□□□ -1.11
LIG4-204ENST00000611712 TRAM1Q15629 374 aa8.12□□□□□ -1.11
LIG4-204ENST00000611712 ODF4Q2M2E3 257 aa8.12□□□□□ -1.11
LIG4-204ENST00000611712 MPEG1Q2M385 716 aa8.12□□□□□ -1.11
LIG4-204ENST00000611712 MRPL2Q5T653 305 aaKnown RBP8.12□□□□□ -1.11
LIG4-204ENST00000611712 TMEM64Q6YI46 380 aa8.12□□□□□ -1.11
LIG4-204ENST00000611712 COMMD2Q86X83 199 aa8.12□□□□□ -1.11
LIG4-204ENST00000611712 OR8H3Q8N146 312 aa8.12□□□□□ -1.11
LIG4-204ENST00000611712 MS4A15Q8N5U1 240 aa8.12□□□□□ -1.11
LIG4-204ENST00000611712 YIPF7Q8N8F6 280 aa8.12□□□□□ -1.11
LIG4-204ENST00000611712 ZNF431Q8TF32 576 aaPredicted RBP8.12□□□□□ -1.11
LIG4-204ENST00000611712 SLC25A46Q96AG3 418 aa8.12□□□□□ -1.11
LIG4-204ENST00000611712 CNRIP1Q96F85 164 aaPredicted RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms