RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 ANKK1Q8NFD2 765 aa12.64□□□□□ -0.39
NEK3-205ENST00000610828 TGM7Q96PF1 710 aa12.64□□□□□ -0.39
NEK3-205ENST00000610828 TEX12Q9BXU0 123 aa12.64□□□□□ -0.39
NEK3-205ENST00000610828 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.64□□□□□ -0.39
NEK3-205ENST00000610828 EXOSC4Q9NPD3 245 aaKnown RBP12.64□□□□□ -0.39
NEK3-205ENST00000610828 SOHLH2Q9NX45 425 aa12.64□□□□□ -0.39
NEK3-205ENST00000610828 TESQ9UGI8 421 aaKnown RBP12.64□□□□□ -0.39
NEK3-205ENST00000610828 MRPS33Q9Y291 106 aaKnown RBP12.64□□□□□ -0.39
NEK3-205ENST00000610828 CARD8Q9Y2G2 431 aa12.64□□□□□ -0.39
NEK3-205ENST00000610828 TMEM131Q92545 1883 aa12.64□□□□□ -0.39
NEK3-205ENST00000610828 OR2W5A6NFC9 320 aa12.64□□□□□ -0.39
NEK3-205ENST00000610828 TGFBR3LH3BV60 316 aa12.64□□□□□ -0.39
NEK3-205ENST00000610828 HRKO00198 91 aa12.64□□□□□ -0.39
NEK3-205ENST00000610828 SDC3O75056 442 aa12.64□□□□□ -0.39
NEK3-205ENST00000610828 SULT1C4O75897 302 aa12.64□□□□□ -0.39
NEK3-205ENST00000610828 NKX2-2O95096 273 aa12.64□□□□□ -0.39
NEK3-205ENST00000610828 MLLT3P42568 568 aaPredicted RBP12.64□□□□□ -0.39
NEK3-205ENST00000610828 GFERP55789 205 aa12.64□□□□□ -0.39
NEK3-205ENST00000610828 PSG6Q00889 435 aa12.64□□□□□ -0.39
NEK3-205ENST00000610828 ZNHIT3Q15649 155 aaPredicted RBP12.64□□□□□ -0.39
NEK3-205ENST00000610828 CYP4Z2PQ8N1L4 340 aa12.64□□□□□ -0.39
NEK3-205ENST00000610828 OR4Q3Q8NH05 313 aa12.64□□□□□ -0.39
NEK3-205ENST00000610828 RNFT2Q96EX2 444 aa12.64□□□□□ -0.39
NEK3-205ENST00000610828 PRSS27Q9BQR3 290 aa12.64□□□□□ -0.39
NEK3-205ENST00000610828 KLHL3Q9UH77 587 aa12.64□□□□□ -0.39
NEK3-205ENST00000610828 KPNA4O00629 521 aaPredicted RBP12.63□□□□□ -0.39
NEK3-205ENST00000610828 KLF4O43474 513 aa12.63□□□□□ -0.39
NEK3-205ENST00000610828 GPX5O75715 221 aa12.63□□□□□ -0.39
NEK3-205ENST00000610828 IFI6P09912 130 aa12.63□□□□□ -0.39
NEK3-205ENST00000610828 OCM2P0CE71 109 aa12.63□□□□□ -0.39
NEK3-205ENST00000610828 OCMP0CE72 109 aaPredicted RBP12.63□□□□□ -0.39
NEK3-205ENST00000610828 MYL12AP19105 171 aa12.63□□□□□ -0.39
NEK3-205ENST00000610828 S1PR1P21453 382 aa12.63□□□□□ -0.39
NEK3-205ENST00000610828 SSTR4P31391 388 aa12.63□□□□□ -0.39
NEK3-205ENST00000610828 ETV5P41161 510 aa12.63□□□□□ -0.39
NEK3-205ENST00000610828 MTNR1AP48039 350 aa12.63□□□□□ -0.39
NEK3-205ENST00000610828 ETV1P50549 477 aa12.63□□□□□ -0.39
NEK3-205ENST00000610828 PERM1Q5SV97 790 aa12.63□□□□□ -0.39
NEK3-205ENST00000610828 RNLSQ5VYX0 342 aa12.63□□□□□ -0.39
NEK3-205ENST00000610828 WDR88Q6ZMY6 472 aa12.63□□□□□ -0.39
NEK3-205ENST00000610828 OR4N2Q8NGD1 307 aa12.63□□□□□ -0.39
NEK3-205ENST00000610828 CHPT1Q8WUD6 406 aa12.63□□□□□ -0.39
NEK3-205ENST00000610828 SNRNP27Q8WVK2 155 aaKnown RBP12.63□□□□□ -0.39
NEK3-205ENST00000610828 MMABQ96EY8 250 aaPredicted RBP12.63□□□□□ -0.39
NEK3-205ENST00000610828 COX4I2Q96KJ9 171 aa12.63□□□□□ -0.39
NEK3-205ENST00000610828 CDADC1Q9BWV3 514 aa12.63□□□□□ -0.39
NEK3-205ENST00000610828 DPH1Q9BZG8 443 aa12.63□□□□□ -0.39
NEK3-205ENST00000610828 FOLH1BQ9HBA9 442 aa12.63□□□□□ -0.39
NEK3-205ENST00000610828 MRPS17Q9Y2R5 130 aaKnown RBP12.63□□□□□ -0.39
NEK3-205ENST00000610828 THADAQ6YHU6 1953 aa12.63□□□□□ -0.39
NEK3-205ENST00000610828 HYKKA2RU49 373 aa12.63□□□□□ -0.39
NEK3-205ENST00000610828 LILRA5A6NI73 299 aa12.63□□□□□ -0.39
NEK3-205ENST00000610828 WWP2O00308 870 aa12.63□□□□□ -0.39
NEK3-205ENST00000610828 SURF4O15260 269 aa12.63□□□□□ -0.39
NEK3-205ENST00000610828 AQP9O43315 295 aa12.63□□□□□ -0.39
NEK3-205ENST00000610828 PSMD7P51665 324 aa12.63□□□□□ -0.39
NEK3-205ENST00000610828 BTG2P78543 158 aa12.63□□□□□ -0.39
NEK3-205ENST00000610828 RAB40BQ12829 278 aa12.63□□□□□ -0.39
NEK3-205ENST00000610828 PDZK1Q5T2W1 519 aa12.63□□□□□ -0.39
NEK3-205ENST00000610828 LIPKQ5VXJ0 399 aa12.63□□□□□ -0.39
NEK3-205ENST00000610828 HSDL2Q6YN16 418 aa12.63□□□□□ -0.39
NEK3-205ENST00000610828 SHFQ7M4L6 423 aa12.63□□□□□ -0.39
NEK3-205ENST00000610828 OR2T33Q8NG76 320 aa12.63□□□□□ -0.39
NEK3-205ENST00000610828 PFN4Q8NHR9 129 aa12.63□□□□□ -0.39
NEK3-205ENST00000610828 TMEM239Q8WW34 195 aa12.63□□□□□ -0.39
NEK3-205ENST00000610828 SAMD8Q96LT4 415 aa12.63□□□□□ -0.39
NEK3-205ENST00000610828 HSPA12BQ96MM6 686 aa12.63□□□□□ -0.39
NEK3-205ENST00000610828 DACH2Q96NX9 599 aa12.63□□□□□ -0.39
NEK3-205ENST00000610828 RACGAP1Q9H0H5 632 aa12.63□□□□□ -0.39
NEK3-205ENST00000610828 PRTFDC1Q9NRG1 225 aa12.63□□□□□ -0.39
NEK3-205ENST00000610828 FAIMQ9NVQ4 179 aa12.63□□□□□ -0.39
NEK3-205ENST00000610828 CHCHD3Q9NX63 227 aaKnown RBP12.63□□□□□ -0.39
NEK3-205ENST00000610828 CCDC59Q9P031 241 aaKnown RBP12.63□□□□□ -0.39
NEK3-205ENST00000610828 CDH10Q9Y6N8 788 aa12.63□□□□□ -0.39
NEK3-205ENST00000610828 ABCA7Q8IZY2 2146 aa12.62□□□□□ -0.39
NEK3-205ENST00000610828 IGHV5-51A0A0C4DH38 117 aa12.62□□□□□ -0.39
NEK3-205ENST00000610828 CLDN4O14493 209 aa12.62□□□□□ -0.39
NEK3-205ENST00000610828 CTNSO60931 367 aa12.62□□□□□ -0.39
NEK3-205ENST00000610828 NSA2O95478 260 aaKnown RBP12.62□□□□□ -0.39
NEK3-205ENST00000610828 FUT1P19526 365 aa12.62□□□□□ -0.39
NEK3-205ENST00000610828 PSMA1P25786 263 aaKnown RBP12.62□□□□□ -0.39
NEK3-205ENST00000610828 GCGRP47871 477 aa12.62□□□□□ -0.39
NEK3-205ENST00000610828 EMDP50402 254 aa12.62□□□□□ -0.39
NEK3-205ENST00000610828 CDH11P55287 796 aa12.62□□□□□ -0.39
NEK3-205ENST00000610828 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.62□□□□□ -0.39
NEK3-205ENST00000610828 MLLT11Q13015 90 aaPredicted RBP12.62□□□□□ -0.39
NEK3-205ENST00000610828 FAM53BQ14153 422 aa12.62□□□□□ -0.39
NEK3-205ENST00000610828 PGGHGQ32M88 737 aa12.62□□□□□ -0.39
NEK3-205ENST00000610828 LRIT3Q3SXY7 679 aa12.62□□□□□ -0.39
NEK3-205ENST00000610828 MINDY4Q4G0A6 757 aa12.62□□□□□ -0.39
NEK3-205ENST00000610828 ZNF595Q8IYB9 648 aa12.62□□□□□ -0.39
NEK3-205ENST00000610828 CADM4Q8NFZ8 388 aa12.62□□□□□ -0.39
NEK3-205ENST00000610828 DGAT2Q96PD7 388 aa12.62□□□□□ -0.39
NEK3-205ENST00000610828 PHOX2BQ99453 314 aa12.62□□□□□ -0.39
NEK3-205ENST00000610828 CNPPD1Q9BV87 410 aa12.62□□□□□ -0.39
NEK3-205ENST00000610828 UCK1Q9HA47 277 aa12.62□□□□□ -0.39
NEK3-205ENST00000610828 ATP13A2Q9NQ11 1180 aa12.62□□□□□ -0.39
NEK3-205ENST00000610828 POLE3Q9NRF9 147 aa12.62□□□□□ -0.39
NEK3-205ENST00000610828 C20orf141Q9NUB4 165 aa12.62□□□□□ -0.39
NEK3-205ENST00000610828 DTX4Q9Y2E6 619 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms