RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 LRIT2A6NDA9 550 aa19.05■□□□□ 0.64
SSBP3-216ENST00000610401 TBC1D3BA6NDS4 549 aa19.05■□□□□ 0.64
SSBP3-216ENST00000610401 ANKRD61A6NGH8 418 aa19.05■□□□□ 0.64
SSBP3-216ENST00000610401 SURF4O15260 269 aa19.05■□□□□ 0.64
SSBP3-216ENST00000610401 HCN1O60741 890 aa19.05■□□□□ 0.64
SSBP3-216ENST00000610401 ZIC2O95409 532 aaPredicted RBP19.05■□□□□ 0.64
SSBP3-216ENST00000610401 PAPLNO95428 1278 aa19.05■□□□□ 0.64
SSBP3-216ENST00000610401 ITGB8P26012 769 aa19.05■□□□□ 0.64
SSBP3-216ENST00000610401 HLA-DMAP28067 261 aa19.05■□□□□ 0.64
SSBP3-216ENST00000610401 HOXD10P28358 340 aa19.05■□□□□ 0.64
SSBP3-216ENST00000610401 GRPRP30550 384 aa19.05■□□□□ 0.64
SSBP3-216ENST00000610401 PCDH1Q08174 1060 aa19.05■□□□□ 0.64
SSBP3-216ENST00000610401 WDR34Q96EX3 536 aa19.05■□□□□ 0.64
SSBP3-216ENST00000610401 FBXO34Q9NWN3 711 aa19.05■□□□□ 0.64
SSBP3-216ENST00000610401 SPHK1Q9NYA1 384 aa19.05■□□□□ 0.64
SSBP3-216ENST00000610401 ACAD8Q9UKU7 415 aa19.05■□□□□ 0.64
SSBP3-216ENST00000610401 CBLCQ9ULV8 474 aa19.05■□□□□ 0.64
SSBP3-216ENST00000610401 EPCAMP16422 314 aa19.05■□□□□ 0.64
SSBP3-216ENST00000610401 DGCR2P98153 550 aa19.05■□□□□ 0.64
SSBP3-216ENST00000610401 GXYLT1Q4G148 440 aa19.05■□□□□ 0.64
SSBP3-216ENST00000610401 EOGTQ5NDL2 527 aa19.05■□□□□ 0.64
SSBP3-216ENST00000610401 FAAP20Q6NZ36 180 aa19.05■□□□□ 0.64
SSBP3-216ENST00000610401 NATD1Q8N6N6 113 aa19.05■□□□□ 0.64
SSBP3-216ENST00000610401 CEP76Q8TAP6 659 aa19.05■□□□□ 0.64
SSBP3-216ENST00000610401 SUN3Q8TAQ9 357 aa19.05■□□□□ 0.64
SSBP3-216ENST00000610401 TRMT10AQ8TBZ6 339 aaKnown RBP19.05■□□□□ 0.64
SSBP3-216ENST00000610401 SLC41A3Q96GZ6 507 aa19.05■□□□□ 0.64
SSBP3-216ENST00000610401 IFT27Q9BW83 186 aa19.05■□□□□ 0.64
SSBP3-216ENST00000610401 PPIEQ9UNP9 301 aaKnown RBP19.05■□□□□ 0.64
SSBP3-216ENST00000610401 STK25O00506 426 aa19.05■□□□□ 0.64
SSBP3-216ENST00000610401 RNF13O43567 381 aa19.05■□□□□ 0.64
SSBP3-216ENST00000610401 EPHA5P54756 1037 aa19.05■□□□□ 0.64
SSBP3-216ENST00000610401 ST3GAL3Q11203 375 aa19.05■□□□□ 0.64
SSBP3-216ENST00000610401 TSPAN31Q12999 210 aa19.05■□□□□ 0.64
SSBP3-216ENST00000610401 SF3A2Q15428 464 aaKnown RBP19.05■□□□□ 0.64
SSBP3-216ENST00000610401 SIGIRRQ6IA17 410 aa19.05■□□□□ 0.64
SSBP3-216ENST00000610401 FIGNL1Q6PIW4 674 aa19.05■□□□□ 0.64
SSBP3-216ENST00000610401 FAM111BQ6SJ93 734 aa19.05■□□□□ 0.64
SSBP3-216ENST00000610401 TCTE3Q8IZS6 198 aa19.05■□□□□ 0.64
SSBP3-216ENST00000610401 FAM181AQ8N9Y4 354 aa19.05■□□□□ 0.64
SSBP3-216ENST00000610401 FAIM2Q9BWQ8 316 aa19.05■□□□□ 0.64
SSBP3-216ENST00000610401 GPR174Q9BXC1 333 aa19.05■□□□□ 0.64
SSBP3-216ENST00000610401 SPRTNQ9H040 489 aaPredicted RBP19.05■□□□□ 0.64
SSBP3-216ENST00000610401 POLMQ9NP87 494 aaPredicted RBP19.05■□□□□ 0.64
SSBP3-216ENST00000610401 SLC9B1P1A6NJY1 282 aa19.04■□□□□ 0.64
SSBP3-216ENST00000610401 ADH1AP07327 375 aa19.04■□□□□ 0.64
SSBP3-216ENST00000610401 OMPP47874 163 aa19.04■□□□□ 0.64
SSBP3-216ENST00000610401 GDF7Q7Z4P5 450 aa19.04■□□□□ 0.64
SSBP3-216ENST00000610401 ARIH2OSQ8N7S6 290 aa19.04■□□□□ 0.64
SSBP3-216ENST00000610401 HCAR2Q8TDS4 363 aa19.04■□□□□ 0.64
SSBP3-216ENST00000610401 INSM2Q96T92 566 aaPredicted RBP19.04■□□□□ 0.64
SSBP3-216ENST00000610401 CREBZFQ9NS37 354 aa19.04■□□□□ 0.64
SSBP3-216ENST00000610401 MOSPD3O75425 235 aa19.04■□□□□ 0.64
SSBP3-216ENST00000610401 GATBO75879 557 aaKnown RBP19.04■□□□□ 0.64
SSBP3-216ENST00000610401 CEBPBP17676 345 aa19.04■□□□□ 0.64
SSBP3-216ENST00000610401 NAA10P41227 235 aaPredicted RBP19.04■□□□□ 0.64
SSBP3-216ENST00000610401 CLDN12P56749 244 aa19.04■□□□□ 0.64
SSBP3-216ENST00000610401 PGGHGQ32M88 737 aa19.04■□□□□ 0.64
SSBP3-216ENST00000610401 PXDC1Q5TGL8 231 aa19.04■□□□□ 0.64
SSBP3-216ENST00000610401 SETD7Q8WTS6 366 aaKnown RBP19.04■□□□□ 0.64
SSBP3-216ENST00000610401 RFKQ969G6 155 aa19.04■□□□□ 0.64
SSBP3-216ENST00000610401 C4orf36Q96KX1 117 aa19.04■□□□□ 0.64
SSBP3-216ENST00000610401 MARVELD1Q9BSK0 173 aa19.04■□□□□ 0.64
SSBP3-216ENST00000610401 SPATA2Q9UM82 520 aa19.04■□□□□ 0.64
SSBP3-216ENST00000610401 DENND4CQ5VZ89 1909 aa19.04■□□□□ 0.64
SSBP3-216ENST00000610401 A0A1W2PPV9 198 aa19.03■□□□□ 0.64
SSBP3-216ENST00000610401 MAN2B1O00754 1011 aa19.03■□□□□ 0.64
SSBP3-216ENST00000610401 CHP2O43745 196 aa19.03■□□□□ 0.64
SSBP3-216ENST00000610401 TP53I3Q53FA7 332 aa19.03■□□□□ 0.64
SSBP3-216ENST00000610401 UXS1Q8NBZ7 420 aa19.03■□□□□ 0.64
SSBP3-216ENST00000610401 OR2T33Q8NG76 320 aa19.03■□□□□ 0.64
SSBP3-216ENST00000610401 OR5K2Q8NHB8 316 aa19.03■□□□□ 0.64
SSBP3-216ENST00000610401 SPATA5L1Q9BVQ7 753 aa19.03■□□□□ 0.64
SSBP3-216ENST00000610401 UBQLN3Q9H347 655 aa19.03■□□□□ 0.64
SSBP3-216ENST00000610401 BRD7Q9NPI1 651 aa19.03■□□□□ 0.64
SSBP3-216ENST00000610401 NLGN3Q9NZ94 848 aa19.03■□□□□ 0.64
SSBP3-216ENST00000610401 ZNF224Q9NZL3 707 aa19.03■□□□□ 0.64
SSBP3-216ENST00000610401 KLHL21Q9UJP4 597 aa19.03■□□□□ 0.64
SSBP3-216ENST00000610401 AK6Q9Y3D8 172 aaKnown RBP19.03■□□□□ 0.64
SSBP3-216ENST00000610401 TEX13CA0A0J9YWL9 993 aa19.03■□□□□ 0.64
SSBP3-216ENST00000610401 FAM171A2A8MVW0 826 aa19.03■□□□□ 0.64
SSBP3-216ENST00000610401 ADH5P11766 374 aa19.03■□□□□ 0.64
SSBP3-216ENST00000610401 GSTM3P21266 225 aa19.03■□□□□ 0.64
SSBP3-216ENST00000610401 TOR2AQ5JU69 321 aa19.03■□□□□ 0.64
SSBP3-216ENST00000610401 CHMP1BQ7LBR1 199 aa19.03■□□□□ 0.64
SSBP3-216ENST00000610401 ZNF433Q8N7K0 673 aaPredicted RBP19.03■□□□□ 0.64
SSBP3-216ENST00000610401 OR13C2Q8NGS9 318 aa19.03■□□□□ 0.64
SSBP3-216ENST00000610401 HSD17B8Q92506 261 aa19.03■□□□□ 0.64
SSBP3-216ENST00000610401 BTBD1Q9H0C5 482 aa19.03■□□□□ 0.64
SSBP3-216ENST00000610401 FGF20Q9NP95 211 aaPredicted RBP19.03■□□□□ 0.64
SSBP3-216ENST00000610401 LIPT1Q9Y234 373 aa19.03■□□□□ 0.64
SSBP3-216ENST00000610401 PCDHGB7Q9Y5F8 929 aa19.03■□□□□ 0.64
SSBP3-216ENST00000610401 THSD7BQ9C0I4 1608 aa19.03■□□□□ 0.64
SSBP3-216ENST00000610401 LEUTXA8MZ59 168 aa19.03■□□□□ 0.64
SSBP3-216ENST00000610401 CHST10O43529 356 aa19.03■□□□□ 0.64
SSBP3-216ENST00000610401 LAG3P18627 525 aa19.03■□□□□ 0.64
SSBP3-216ENST00000610401 CRYZQ08257 329 aaKnown RBP19.03■□□□□ 0.64
SSBP3-216ENST00000610401 SRSF5Q13243 272 aaKnown RBP19.03■□□□□ 0.64
SSBP3-216ENST00000610401 AADACL4Q5VUY2 407 aa19.03■□□□□ 0.64
SSBP3-216ENST00000610401 PIAS4Q8N2W9 510 aaPredicted RBP19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms