RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 SH3BP4Q9P0V3 963 aa12□□□□□ -0.49
POLR2J3-219ENST00000608621 EMC9Q9Y3B6 208 aa12□□□□□ -0.49
POLR2J3-219ENST00000608621 PTGDR2Q9Y5Y4 395 aa12□□□□□ -0.49
POLR2J3-219ENST00000608621 FN1P02751 2386 aaKnown RBP11.99□□□□□ -0.49
POLR2J3-219ENST00000608621 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.99□□□□□ -0.49
POLR2J3-219ENST00000608621 UQCRHLA0A096LP55 91 aa11.99□□□□□ -0.49
POLR2J3-219ENST00000608621 SLC28A1O00337 649 aa11.99□□□□□ -0.49
POLR2J3-219ENST00000608621 KLF4O43474 513 aa11.99□□□□□ -0.49
POLR2J3-219ENST00000608621 CXCL13O43927 109 aa11.99□□□□□ -0.49
POLR2J3-219ENST00000608621 PLIN3O60664 434 aa11.99□□□□□ -0.49
POLR2J3-219ENST00000608621 OXSR1O95747 527 aaPredicted RBP11.99□□□□□ -0.49
POLR2J3-219ENST00000608621 PLGP00747 810 aaPredicted RBP11.99□□□□□ -0.49
POLR2J3-219ENST00000608621 ACP2P11117 423 aa11.99□□□□□ -0.49
POLR2J3-219ENST00000608621 CPA3P15088 417 aa11.99□□□□□ -0.49
POLR2J3-219ENST00000608621 IL11P20809 199 aa11.99□□□□□ -0.49
POLR2J3-219ENST00000608621 PRPH2P23942 346 aa11.99□□□□□ -0.49
POLR2J3-219ENST00000608621 CCT5P48643 541 aa11.99□□□□□ -0.49
POLR2J3-219ENST00000608621 MANFP55145 182 aaKnown RBP11.99□□□□□ -0.49
POLR2J3-219ENST00000608621 CTBP2P56545 445 aa11.99□□□□□ -0.49
POLR2J3-219ENST00000608621 CCDC153Q494R4 210 aa11.99□□□□□ -0.49
POLR2J3-219ENST00000608621 VPS26BQ4G0F5 336 aa11.99□□□□□ -0.49
POLR2J3-219ENST00000608621 CPTPQ5TA50 214 aa11.99□□□□□ -0.49
POLR2J3-219ENST00000608621 FIGNL1Q6PIW4 674 aa11.99□□□□□ -0.49
POLR2J3-219ENST00000608621 C20orf204Q6ZNR8 217 aa11.99□□□□□ -0.49
POLR2J3-219ENST00000608621 PLEKHM3Q6ZWE6 761 aa11.99□□□□□ -0.49
POLR2J3-219ENST00000608621 ZAR1Q86SH2 424 aa11.99□□□□□ -0.49
POLR2J3-219ENST00000608621 WDR75Q8IWA0 830 aaKnown RBP11.99□□□□□ -0.49
POLR2J3-219ENST00000608621 CDRT4Q8N9R6 151 aa11.99□□□□□ -0.49
POLR2J3-219ENST00000608621 CCDC63Q8NA47 563 aa11.99□□□□□ -0.49
POLR2J3-219ENST00000608621 GATSQ8NAP1 163 aa11.99□□□□□ -0.49
POLR2J3-219ENST00000608621 SLC16A11Q8NCK7 471 aa11.99□□□□□ -0.49
POLR2J3-219ENST00000608621 OR6K3Q8NGY3 331 aa11.99□□□□□ -0.49
POLR2J3-219ENST00000608621 FBXO30Q8TB52 745 aa11.99□□□□□ -0.49
POLR2J3-219ENST00000608621 FAM110BQ8TC76 370 aa11.99□□□□□ -0.49
POLR2J3-219ENST00000608621 HOXB13Q92826 284 aaPredicted RBP11.99□□□□□ -0.49
POLR2J3-219ENST00000608621 CAVIN3Q969G5 261 aa11.99□□□□□ -0.49
POLR2J3-219ENST00000608621 GIMAP5Q96F15 307 aa11.99□□□□□ -0.49
POLR2J3-219ENST00000608621 GMPPAQ96IJ6 420 aaPredicted RBP11.99□□□□□ -0.49
POLR2J3-219ENST00000608621 ADGRG7Q96K78 797 aa11.99□□□□□ -0.49
POLR2J3-219ENST00000608621 IQCGQ9H095 443 aaKnown RBP11.99□□□□□ -0.49
POLR2J3-219ENST00000608621 REEP4Q9H6H4 257 aa11.99□□□□□ -0.49
POLR2J3-219ENST00000608621 LRTM1Q9HBL6 345 aa11.99□□□□□ -0.49
POLR2J3-219ENST00000608621 FBXO34Q9NWN3 711 aa11.99□□□□□ -0.49
POLR2J3-219ENST00000608621 OXSMQ9NWU1 459 aa11.99□□□□□ -0.49
POLR2J3-219ENST00000608621 C1orf109Q9NX04 203 aa11.99□□□□□ -0.49
POLR2J3-219ENST00000608621 BAIAP2L1Q9UHR4 511 aa11.99□□□□□ -0.49
POLR2J3-219ENST00000608621 FIS1Q9Y3D6 152 aa11.99□□□□□ -0.49
POLR2J3-219ENST00000608621 A0A087WZY1 265 aa11.98□□□□□ -0.49
POLR2J3-219ENST00000608621 A0A0J9YW62 118 aa11.98□□□□□ -0.49
POLR2J3-219ENST00000608621 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.98□□□□□ -0.49
POLR2J3-219ENST00000608621 TRIM64A6NGJ6 449 aa11.98□□□□□ -0.49
POLR2J3-219ENST00000608621 TRIM64BA6NI03 449 aa11.98□□□□□ -0.49
POLR2J3-219ENST00000608621 NPIPB8E9PQR5 432 aa11.98□□□□□ -0.49
POLR2J3-219ENST00000608621 RGS14O43566 566 aa11.98□□□□□ -0.49
POLR2J3-219ENST00000608621 TBX19O60806 448 aa11.98□□□□□ -0.49
POLR2J3-219ENST00000608621 SS18L1O75177 396 aaPredicted RBP11.98□□□□□ -0.49
POLR2J3-219ENST00000608621 KCNK2O95069 426 aa11.98□□□□□ -0.49
POLR2J3-219ENST00000608621 SYNGR4O95473 234 aa11.98□□□□□ -0.49
POLR2J3-219ENST00000608621 PPP3CBP16298 524 aa11.98□□□□□ -0.49
POLR2J3-219ENST00000608621 ZNF17P17021 662 aa11.98□□□□□ -0.49
POLR2J3-219ENST00000608621 CRHR1P34998 444 aa11.98□□□□□ -0.49
POLR2J3-219ENST00000608621 RAC1P63000 192 aa11.98□□□□□ -0.49
POLR2J3-219ENST00000608621 SLC18A2Q05940 514 aa11.98□□□□□ -0.49
POLR2J3-219ENST00000608621 CTU2Q2VPK5 515 aaKnown RBP11.98□□□□□ -0.49
POLR2J3-219ENST00000608621 BEX5Q5H9J7 111 aa11.98□□□□□ -0.49
POLR2J3-219ENST00000608621 STAC2Q6ZMT1 411 aa11.98□□□□□ -0.49
POLR2J3-219ENST00000608621 SZRD1Q7Z422 152 aa11.98□□□□□ -0.49
POLR2J3-219ENST00000608621 CNPY4Q8N129 248 aa11.98□□□□□ -0.49
POLR2J3-219ENST00000608621 GTPBP8Q8N3Z3 284 aaPredicted RBP11.98□□□□□ -0.49
POLR2J3-219ENST00000608621 CEP112Q8N8E3 955 aa11.98□□□□□ -0.49
POLR2J3-219ENST00000608621 OR6Y1Q8NGX8 325 aa11.98□□□□□ -0.49
POLR2J3-219ENST00000608621 OR2T11Q8NH01 316 aa11.98□□□□□ -0.49
POLR2J3-219ENST00000608621 CLHC1Q8NHS4 586 aa11.98□□□□□ -0.49
POLR2J3-219ENST00000608621 ZFP28Q8NHY6 868 aa11.98□□□□□ -0.49
POLR2J3-219ENST00000608621 NUDT8Q8WV74 236 aa11.98□□□□□ -0.49
POLR2J3-219ENST00000608621 PPCDCQ96CD2 204 aa11.98□□□□□ -0.49
POLR2J3-219ENST00000608621 ZBED6CLQ96FA7 236 aaPredicted RBP11.98□□□□□ -0.49
POLR2J3-219ENST00000608621 C16orf58Q96GQ5 468 aa11.98□□□□□ -0.49
POLR2J3-219ENST00000608621 ZNF764Q96H86 408 aaPredicted RBP11.98□□□□□ -0.49
POLR2J3-219ENST00000608621 SH3YL1Q96HL8 342 aaPredicted RBP11.98□□□□□ -0.49
POLR2J3-219ENST00000608621 TSSK3Q96PN8 268 aa11.98□□□□□ -0.49
POLR2J3-219ENST00000608621 RHOXF2Q9BQY4 288 aa11.98□□□□□ -0.49
POLR2J3-219ENST00000608621 HHATLQ9HCP6 504 aa11.98□□□□□ -0.49
POLR2J3-219ENST00000608621 PAQR5Q9NXK6 330 aaPredicted RBP11.98□□□□□ -0.49
POLR2J3-219ENST00000608621 NTMQ9P121 344 aa11.98□□□□□ -0.49
POLR2J3-219ENST00000608621 MCTS1Q9ULC4 181 aaKnown RBP11.98□□□□□ -0.49
POLR2J3-219ENST00000608621 PRR14LQ5THK1 2151 aa11.98□□□□□ -0.49
POLR2J3-219ENST00000608621 RAI1Q7Z5J4 1906 aaPredicted RBP11.98□□□□□ -0.49
POLR2J3-219ENST00000608621 A0A1W2PRB8 838 aa11.97□□□□□ -0.49
POLR2J3-219ENST00000608621 TNFSF11O14788 317 aa11.97□□□□□ -0.49
POLR2J3-219ENST00000608621 AZIN1O14977 448 aa11.97□□□□□ -0.49
POLR2J3-219ENST00000608621 ADAMDEC1O15204 470 aa11.97□□□□□ -0.49
POLR2J3-219ENST00000608621 PLAUP00749 431 aa11.97□□□□□ -0.49
POLR2J3-219ENST00000608621 SHBGP04278 402 aa11.97□□□□□ -0.49
POLR2J3-219ENST00000608621 NGFRP08138 427 aa11.97□□□□□ -0.49
POLR2J3-219ENST00000608621 LINC00032P0C843 101 aa11.97□□□□□ -0.49
POLR2J3-219ENST00000608621 HPGDP15428 266 aa11.97□□□□□ -0.49
POLR2J3-219ENST00000608621 SDC1P18827 310 aa11.97□□□□□ -0.49
POLR2J3-219ENST00000608621 EFNA1P20827 205 aaPredicted RBP11.97□□□□□ -0.49
POLR2J3-219ENST00000608621 PSMA4P25789 261 aaKnown RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms