RNA–Protein interactions for RNA: ENST00000608287.1

SGMS1-208, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-208ENST00000608287 VPS26BQ4G0F5 336 aa17.42■□□□□ 0.38
SGMS1-208ENST00000608287 ACSF3Q4G176 576 aaPredicted RBP17.42■□□□□ 0.38
SGMS1-208ENST00000608287 PODNL1Q6PEZ8 512 aa17.42■□□□□ 0.38
SGMS1-208ENST00000608287 NATD1Q8N6N6 113 aa17.42■□□□□ 0.38
SGMS1-208ENST00000608287 CDRT4Q8N9R6 151 aa17.42■□□□□ 0.38
SGMS1-208ENST00000608287 FBXO30Q8TB52 745 aa17.42■□□□□ 0.38
SGMS1-208ENST00000608287 RAB3IL1Q8TBN0 382 aa17.42■□□□□ 0.38
SGMS1-208ENST00000608287 TMEM158Q8WZ71 300 aa17.42■□□□□ 0.38
SGMS1-208ENST00000608287 OR5P2Q8WZ92 322 aa17.42■□□□□ 0.38
SGMS1-208ENST00000608287 PIK3R3Q92569 461 aa17.42■□□□□ 0.38
SGMS1-208ENST00000608287 DUSP26Q9BV47 211 aa17.42■□□□□ 0.38
SGMS1-208ENST00000608287 BHLHE41Q9C0J9 482 aaPredicted RBP17.42■□□□□ 0.38
SGMS1-208ENST00000608287 MANSC1Q9H8J5 431 aa17.42■□□□□ 0.38
SGMS1-208ENST00000608287 MEAF6Q9HAF1 191 aa17.42■□□□□ 0.38
SGMS1-208ENST00000608287 SERHLQ9NQF3 203 aa17.42■□□□□ 0.38
SGMS1-208ENST00000608287 ZCCHC3Q9NUD5 404 aaKnown RBP17.42■□□□□ 0.38
SGMS1-208ENST00000608287 ARGLU1Q9NWB6 273 aaPredicted RBP17.42■□□□□ 0.38
SGMS1-208ENST00000608287 NTMQ9P121 344 aa17.42■□□□□ 0.38
SGMS1-208ENST00000608287 MARCOQ9UEW3 520 aaPredicted RBP17.42■□□□□ 0.38
SGMS1-208ENST00000608287 WIF1Q9Y5W5 379 aa17.42■□□□□ 0.38
SGMS1-208ENST00000608287 NBEAL1Q6ZS30 2694 aa17.41■□□□□ 0.38
SGMS1-208ENST00000608287 FBN1P35555 2871 aaKnown RBP17.41■□□□□ 0.38
SGMS1-208ENST00000608287 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.41■□□□□ 0.38
SGMS1-208ENST00000608287 GXYLT2A0PJZ3 443 aa17.41■□□□□ 0.38
SGMS1-208ENST00000608287 CFLARO15519 480 aa17.41■□□□□ 0.38
SGMS1-208ENST00000608287 CBR3O75828 277 aa17.41■□□□□ 0.38
SGMS1-208ENST00000608287 KCNH1O95259 989 aa17.41■□□□□ 0.38
SGMS1-208ENST00000608287 IL33O95760 270 aa17.41■□□□□ 0.38
SGMS1-208ENST00000608287 C6orf47O95873 294 aa17.41■□□□□ 0.38
SGMS1-208ENST00000608287 IL18BPO95998 194 aa17.41■□□□□ 0.38
SGMS1-208ENST00000608287 KITP10721 976 aa17.41■□□□□ 0.38
SGMS1-208ENST00000608287 LBPP18428 481 aa17.41■□□□□ 0.38
SGMS1-208ENST00000608287 PSMD4P55036 377 aaKnown RBP17.41■□□□□ 0.38
SGMS1-208ENST00000608287 LSM12Q3MHD2 195 aaKnown RBP17.41■□□□□ 0.38
SGMS1-208ENST00000608287 EIPR1Q53HC9 387 aa17.41■□□□□ 0.38
SGMS1-208ENST00000608287 WIPI1Q5MNZ9 446 aaPredicted RBP17.41■□□□□ 0.38
SGMS1-208ENST00000608287 SEM1Q6ZVN7 128 aa17.41■□□□□ 0.38
SGMS1-208ENST00000608287 WDSUB1Q8N9V3 476 aa17.41■□□□□ 0.38
SGMS1-208ENST00000608287 NAXEQ8NCW5 288 aa17.41■□□□□ 0.38
SGMS1-208ENST00000608287 TNIP2Q8NFZ5 429 aa17.41■□□□□ 0.38
SGMS1-208ENST00000608287 FAM120BQ96EK7 910 aaKnown RBP17.41■□□□□ 0.38
SGMS1-208ENST00000608287 GIMAP5Q96F15 307 aa17.41■□□□□ 0.38
SGMS1-208ENST00000608287 DPY30Q9C005 99 aa17.41■□□□□ 0.38
SGMS1-208ENST00000608287 SIRT3Q9NTG7 399 aaPredicted RBP17.41■□□□□ 0.38
SGMS1-208ENST00000608287 SLC6A5Q9Y345 797 aa17.41■□□□□ 0.38
SGMS1-208ENST00000608287 SCO2O43819 266 aa17.4■□□□□ 0.38
SGMS1-208ENST00000608287 NKX2-2O95096 273 aa17.4■□□□□ 0.38
SGMS1-208ENST00000608287 ACP2P11117 423 aa17.4■□□□□ 0.38
SGMS1-208ENST00000608287 CTSSP25774 331 aa17.4■□□□□ 0.38
SGMS1-208ENST00000608287 EVI2BP34910 448 aa17.4■□□□□ 0.38
SGMS1-208ENST00000608287 PRIM2P49643 509 aa17.4■□□□□ 0.38
SGMS1-208ENST00000608287 C21orf58P58505 322 aa17.4■□□□□ 0.38
SGMS1-208ENST00000608287 POU4F3Q15319 338 aa17.4■□□□□ 0.38
SGMS1-208ENST00000608287 SPDYE7PQ495Y7 208 aa17.4■□□□□ 0.38
SGMS1-208ENST00000608287 OR5M10Q6IEU7 315 aa17.4■□□□□ 0.38
SGMS1-208ENST00000608287 MFSD12Q6NUT3 480 aa17.4■□□□□ 0.38
SGMS1-208ENST00000608287 HDXQ7Z353 690 aa17.4■□□□□ 0.38
SGMS1-208ENST00000608287 YRDCQ86U90 279 aaKnown RBP17.4■□□□□ 0.38
SGMS1-208ENST00000608287 PLCZ1Q86YW0 608 aa17.4■□□□□ 0.38
SGMS1-208ENST00000608287 SLC16A11Q8NCK7 471 aa17.4■□□□□ 0.38
SGMS1-208ENST00000608287 FAM83FQ8NEG4 500 aaPredicted RBP17.4■□□□□ 0.38
SGMS1-208ENST00000608287 RNF138Q8WVD3 245 aa17.4■□□□□ 0.38
SGMS1-208ENST00000608287 JADE3Q92613 823 aa17.4■□□□□ 0.38
SGMS1-208ENST00000608287 CHMP6Q96FZ7 201 aa17.4■□□□□ 0.38
SGMS1-208ENST00000608287 C16orf58Q96GQ5 468 aa17.4■□□□□ 0.38
SGMS1-208ENST00000608287 ATP6V1G3Q96LB4 118 aa17.4■□□□□ 0.38
SGMS1-208ENST00000608287 CXorf36Q9H7Y0 433 aa17.4■□□□□ 0.38
SGMS1-208ENST00000608287 FLRT3Q9NZU0 649 aa17.4■□□□□ 0.38
SGMS1-208ENST00000608287 NDRG3Q9UGV2 375 aa17.4■□□□□ 0.38
SGMS1-208ENST00000608287 MXRA5Q9NR99 2828 aa17.4■□□□□ 0.38
SGMS1-208ENST00000608287 TRPC5OSA6NMA1 111 aa17.39■□□□□ 0.37
SGMS1-208ENST00000608287 SDHDO14521 159 aa17.39■□□□□ 0.37
SGMS1-208ENST00000608287 HDAC3O15379 428 aa17.39■□□□□ 0.37
SGMS1-208ENST00000608287 ALOX5P09917 674 aa17.39■□□□□ 0.37
SGMS1-208ENST00000608287 MAP3K8P41279 467 aa17.39■□□□□ 0.37
SGMS1-208ENST00000608287 CCT3P49368 545 aaKnown RBP17.39■□□□□ 0.37
SGMS1-208ENST00000608287 ZNF136P52737 540 aa17.39■□□□□ 0.37
SGMS1-208ENST00000608287 GAS1P54826 345 aa17.39■□□□□ 0.37
SGMS1-208ENST00000608287 NSUN5P2Q63ZY6 315 aa17.39■□□□□ 0.37
SGMS1-208ENST00000608287 OR4F3Q6IEY1 312 aa17.39■□□□□ 0.37
SGMS1-208ENST00000608287 ZCCHC12Q6PEW1 402 aa17.39■□□□□ 0.37
SGMS1-208ENST00000608287 LRRC34Q8IZ02 419 aa17.39■□□□□ 0.37
SGMS1-208ENST00000608287 GOLGA6L1Q8N7Z2 621 aa17.39■□□□□ 0.37
SGMS1-208ENST00000608287 OR14L1PQ8NHC6 308 aa17.39■□□□□ 0.37
SGMS1-208ENST00000608287 HOXB13Q92826 284 aaPredicted RBP17.39■□□□□ 0.37
SGMS1-208ENST00000608287 OTUB1Q96FW1 271 aaPredicted RBP17.39■□□□□ 0.37
SGMS1-208ENST00000608287 CCL19Q99731 98 aa17.39■□□□□ 0.37
SGMS1-208ENST00000608287 PPP4R1LQ9P1A2 415 aa17.39■□□□□ 0.37
SGMS1-208ENST00000608287 ABCG2Q9UNQ0 655 aa17.39■□□□□ 0.37
SGMS1-208ENST00000608287 GOLGA8QA0A0J9YX86 632 aa17.38■□□□□ 0.37
SGMS1-208ENST00000608287 SH3D21A4FU49 640 aa17.38■□□□□ 0.37
SGMS1-208ENST00000608287 GOLGA8OA6NCC3 632 aa17.38■□□□□ 0.37
SGMS1-208ENST00000608287 GOLGA8NF8WBI6 632 aa17.38■□□□□ 0.37
SGMS1-208ENST00000608287 SLCO1B7G3V0H7 640 aa17.38■□□□□ 0.37
SGMS1-208ENST00000608287 FADS1O60427 444 aa17.38■□□□□ 0.37
SGMS1-208ENST00000608287 IGKV1D-16P01601 117 aa17.38■□□□□ 0.37
SGMS1-208ENST00000608287 HMGN2P05204 90 aaKnown RBP17.38■□□□□ 0.37
SGMS1-208ENST00000608287 SOAT1P35610 550 aa17.38■□□□□ 0.37
SGMS1-208ENST00000608287 CLK3P49761 638 aaKnown RBP17.38■□□□□ 0.37
SGMS1-208ENST00000608287 OCRLQ01968 901 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms