RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 FBXL3Q9UKT7 428 aa8.33□□□□□ -1.08
COMMD3-215ENST00000602574 NIP7Q9Y221 180 aaKnown RBP eCLIP8.33□□□□□ -1.08
COMMD3-215ENST00000602574 BTRCQ9Y297 605 aa8.33□□□□□ -1.08
COMMD3-215ENST00000602574 ZFP30Q9Y2G7 519 aa8.33□□□□□ -1.08
COMMD3-215ENST00000602574 V9GYS6 101 aa8.33□□□□□ -1.08
COMMD3-215ENST00000602574 ASTN1O14525 1302 aa8.33□□□□□ -1.08
COMMD3-215ENST00000602574 BLACEA4D250 179 aa8.32□□□□□ -1.08
COMMD3-215ENST00000602574 CBY3A6NI87 242 aa8.32□□□□□ -1.08
COMMD3-215ENST00000602574 ZNF587BE7ETH6 402 aa8.32□□□□□ -1.08
COMMD3-215ENST00000602574 F5H423 210 aaPredicted RBP8.32□□□□□ -1.08
COMMD3-215ENST00000602574 MAN2B1O00754 1011 aa8.32□□□□□ -1.08
COMMD3-215ENST00000602574 KCNQ2O43526 872 aa8.32□□□□□ -1.08
COMMD3-215ENST00000602574 TCF21O43680 179 aa8.32□□□□□ -1.08
COMMD3-215ENST00000602574 AOC2O75106 756 aa8.32□□□□□ -1.08
COMMD3-215ENST00000602574 CA11O75493 328 aa8.32□□□□□ -1.08
COMMD3-215ENST00000602574 NDUFB10O96000 172 aa8.32□□□□□ -1.08
COMMD3-215ENST00000602574 ALDOAP04075 364 aaKnown RBP8.32□□□□□ -1.08
COMMD3-215ENST00000602574 ADRB2P07550 413 aa8.32□□□□□ -1.08
COMMD3-215ENST00000602574 MAPTP10636 758 aaKnown RBP8.32□□□□□ -1.08
COMMD3-215ENST00000602574 DRD2P14416 443 aa8.32□□□□□ -1.08
COMMD3-215ENST00000602574 HLA-GP17693 338 aa8.32□□□□□ -1.08
COMMD3-215ENST00000602574 RAB5AP20339 215 aa8.32□□□□□ -1.08
COMMD3-215ENST00000602574 SLC6A2P23975 617 aa8.32□□□□□ -1.08
COMMD3-215ENST00000602574 APEX1P27695 318 aaKnown RBP8.32□□□□□ -1.08
COMMD3-215ENST00000602574 GSK3BP49841 420 aa8.32□□□□□ -1.08
COMMD3-215ENST00000602574 RPS20P60866 119 aaKnown RBP8.32□□□□□ -1.08
COMMD3-215ENST00000602574 MYL7Q01449 175 aa8.32□□□□□ -1.08
COMMD3-215ENST00000602574 FMO1Q01740 532 aa8.32□□□□□ -1.08
COMMD3-215ENST00000602574 SCGB2A2Q13296 93 aa8.32□□□□□ -1.08
COMMD3-215ENST00000602574 PTPRCAPQ14761 206 aa8.32□□□□□ -1.08
COMMD3-215ENST00000602574 LASP1Q14847 261 aaKnown RBP8.32□□□□□ -1.08
COMMD3-215ENST00000602574 FAM98CQ17RN3 349 aaKnown RBP8.32□□□□□ -1.08
COMMD3-215ENST00000602574 SLC35G1Q2M3R5 365 aa8.32□□□□□ -1.08
COMMD3-215ENST00000602574 NKAPLQ5M9Q1 402 aa8.32□□□□□ -1.08
COMMD3-215ENST00000602574 GCNT6Q5T4J0 391 aa8.32□□□□□ -1.08
COMMD3-215ENST00000602574 PRAMEF8Q5VWM4 474 aa8.32□□□□□ -1.08
COMMD3-215ENST00000602574 PRAMEF7Q5VXH5 474 aa8.32□□□□□ -1.08
COMMD3-215ENST00000602574 LIPMQ5VYY2 423 aa8.32□□□□□ -1.08
COMMD3-215ENST00000602574 RNF219Q5W0B1 726 aaPredicted RBP8.32□□□□□ -1.08
COMMD3-215ENST00000602574 GDF6Q6KF10 455 aaPredicted RBP8.32□□□□□ -1.08
COMMD3-215ENST00000602574 SSX7Q7RTT5 188 aa8.32□□□□□ -1.08
COMMD3-215ENST00000602574 UNC93AQ86WB7 457 aa8.32□□□□□ -1.08
COMMD3-215ENST00000602574 OR4A15Q8NGL6 344 aa8.32□□□□□ -1.08
COMMD3-215ENST00000602574 PCDH19Q8TAB3 1148 aa8.32□□□□□ -1.08
COMMD3-215ENST00000602574 ASB13Q8WXK3 278 aa8.32□□□□□ -1.08
COMMD3-215ENST00000602574 TMEM125Q96AQ2 219 aa8.32□□□□□ -1.08
COMMD3-215ENST00000602574 ULK4Q96C45 1275 aa8.32□□□□□ -1.08
COMMD3-215ENST00000602574 CERS2Q96G23 380 aa8.32□□□□□ -1.08
COMMD3-215ENST00000602574 P2RY11Q96G91 374 aa8.32□□□□□ -1.08
COMMD3-215ENST00000602574 KREMEN1Q96MU8 473 aa8.32□□□□□ -1.08
COMMD3-215ENST00000602574 GATA5Q9BWX5 397 aaPredicted RBP8.32□□□□□ -1.08
COMMD3-215ENST00000602574 MFFQ9GZY8 342 aa8.32□□□□□ -1.08
COMMD3-215ENST00000602574 SMURF2Q9HAU4 748 aa8.32□□□□□ -1.08
COMMD3-215ENST00000602574 SLC25A19Q9HC21 320 aa8.32□□□□□ -1.08
COMMD3-215ENST00000602574 ZNF302Q9NR11 478 aa8.32□□□□□ -1.08
COMMD3-215ENST00000602574 OXSMQ9NWU1 459 aa8.32□□□□□ -1.08
COMMD3-215ENST00000602574 GSKIPQ9P0R6 139 aa8.32□□□□□ -1.08
COMMD3-215ENST00000602574 EGFL7Q9UHF1 273 aa8.32□□□□□ -1.08
COMMD3-215ENST00000602574 FZD10Q9ULW2 581 aa8.32□□□□□ -1.08
COMMD3-215ENST00000602574 PIN4Q9Y237 131 aaKnown RBP8.32□□□□□ -1.08
COMMD3-215ENST00000602574 CHST2Q9Y4C5 530 aa8.32□□□□□ -1.08
COMMD3-215ENST00000602574 ISM1B1AKI9 464 aa8.32□□□□□ -1.08
COMMD3-215ENST00000602574 M0R3H8 397 aa8.32□□□□□ -1.08
COMMD3-215ENST00000602574 VAMP5O95183 116 aa8.32□□□□□ -1.08
COMMD3-215ENST00000602574 CYB5R3P00387 301 aaPredicted RBP8.32□□□□□ -1.08
COMMD3-215ENST00000602574 HMBSP08397 361 aa8.32□□□□□ -1.08
COMMD3-215ENST00000602574 SLC35G4P0C7Q5 338 aa8.32□□□□□ -1.08
COMMD3-215ENST00000602574 PTPRAP18433 802 aa8.32□□□□□ -1.08
COMMD3-215ENST00000602574 TBPP20226 339 aa8.32□□□□□ -1.08
COMMD3-215ENST00000602574 CD82P27701 267 aa8.32□□□□□ -1.08
COMMD3-215ENST00000602574 OR3A1P47881 315 aa8.32□□□□□ -1.08
COMMD3-215ENST00000602574 DGKGP49619 791 aa8.32□□□□□ -1.08
COMMD3-215ENST00000602574 FAM189BP81408 668 aa8.32□□□□□ -1.08
COMMD3-215ENST00000602574 ITKQ08881 620 aa8.32□□□□□ -1.08
COMMD3-215ENST00000602574 SRSF5Q13243 272 aaKnown RBP8.32□□□□□ -1.08
COMMD3-215ENST00000602574 GTF2H2Q13888 395 aa8.32□□□□□ -1.08
COMMD3-215ENST00000602574 GPR176Q14439 515 aa8.32□□□□□ -1.08
COMMD3-215ENST00000602574 GTF2H2CQ6P1K8 395 aa8.32□□□□□ -1.08
COMMD3-215ENST00000602574 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.32□□□□□ -1.08
COMMD3-215ENST00000602574 GRINAQ7Z429 371 aa8.32□□□□□ -1.08
COMMD3-215ENST00000602574 WDFY1Q8IWB7 410 aa8.32□□□□□ -1.08
COMMD3-215ENST00000602574 ATP6V1C2Q8NEY4 427 aa8.32□□□□□ -1.08
COMMD3-215ENST00000602574 OR52M1Q8NGK5 317 aa8.32□□□□□ -1.08
COMMD3-215ENST00000602574 CDS1Q92903 461 aa8.32□□□□□ -1.08
COMMD3-215ENST00000602574 ADGRG7Q96K78 797 aa8.32□□□□□ -1.08
COMMD3-215ENST00000602574 TGM7Q96PF1 710 aa8.32□□□□□ -1.08
COMMD3-215ENST00000602574 JAM3Q9BX67 310 aa8.32□□□□□ -1.08
COMMD3-215ENST00000602574 ZNF430Q9H8G1 570 aaPredicted RBP8.32□□□□□ -1.08
COMMD3-215ENST00000602574 MKKSQ9NPJ1 570 aaPredicted RBP8.32□□□□□ -1.08
COMMD3-215ENST00000602574 PDLIM7Q9NR12 457 aa8.32□□□□□ -1.08
COMMD3-215ENST00000602574 SAE1Q9UBE0 346 aaPredicted RBP8.32□□□□□ -1.08
COMMD3-215ENST00000602574 IL17BQ9UHF5 180 aa8.32□□□□□ -1.08
COMMD3-215ENST00000602574 DKKL1Q9UK85 242 aa8.32□□□□□ -1.08
COMMD3-215ENST00000602574 TMED3Q9Y3Q3 217 aa8.32□□□□□ -1.08
COMMD3-215ENST00000602574 CLDN16Q9Y5I7 305 aa8.32□□□□□ -1.08
COMMD3-215ENST00000602574 COL5A2P05997 1499 aaPredicted RBP8.31□□□□□ -1.08
COMMD3-215ENST00000602574 TRBV11-1A0A0K0K1C0 115 aa8.31□□□□□ -1.08
COMMD3-215ENST00000602574 A0A1W2PQL4 384 aaPredicted RBP8.31□□□□□ -1.08
COMMD3-215ENST00000602574 C9orf172C9J069 976 aa8.31□□□□□ -1.08
COMMD3-215ENST00000602574 ANHXE9PGG2 379 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms